RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 FAM236AA0A1B0GUQ0 79 aa2.31□□□□□ -2.04
HERPUD1-213ENST00000568358 FAM236BA0A1B0GV22 79 aa2.31□□□□□ -2.04
HERPUD1-213ENST00000568358 HRES1P13985 223 aa2.31□□□□□ -2.04
HERPUD1-213ENST00000568358 C7orf65Q6ZTY9 151 aa2.31□□□□□ -2.04
HERPUD1-213ENST00000568358 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
HERPUD1-213ENST00000568358 M0R143 59 aa2.3□□□□□ -2.04
HERPUD1-213ENST00000568358 UQCRQO14949 82 aa2.3□□□□□ -2.04
HERPUD1-213ENST00000568358 NREPQ16612 68 aa2.3□□□□□ -2.04
HERPUD1-213ENST00000568358 C1orf64Q8NEQ6 169 aa2.3□□□□□ -2.04
HERPUD1-213ENST00000568358 MT2AP02795 61 aa2.29□□□□□ -2.04
HERPUD1-213ENST00000568358 NAA38Q9BRA0 125 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-213ENST00000568358 LOC110117498A0A087WWA1 95 aa2.28□□□□□ -2.04
HERPUD1-213ENST00000568358 IGKV3D-7A0A0C4DH55 119 aa2.28□□□□□ -2.04
HERPUD1-213ENST00000568358 H3BPC8 53 aa2.27□□□□□ -2.05
HERPUD1-213ENST00000568358 CCDC179H3BU77 68 aa2.27□□□□□ -2.05
HERPUD1-213ENST00000568358 MT1FP04733 61 aa2.27□□□□□ -2.05
HERPUD1-213ENST00000568358 WFDC13Q8IUB5 93 aa2.27□□□□□ -2.05
HERPUD1-213ENST00000568358 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
HERPUD1-213ENST00000568358 TRAV7A0A075B6U4 112 aa2.26□□□□□ -2.05
HERPUD1-213ENST00000568358 hDV103S1A0JD37 113 aa2.26□□□□□ -2.05
HERPUD1-213ENST00000568358 TMEM254Q8TBM7 123 aa2.26□□□□□ -2.05
HERPUD1-213ENST00000568358 MRPL34Q9BQ48 92 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-213ENST00000568358 H3BT86 120 aa2.25□□□□□ -2.05
HERPUD1-213ENST00000568358 KRTAP10-7P60409 375 aaPredicted RBP2.25□□□□□ -2.05
HERPUD1-213ENST00000568358 TMEM258P61165 79 aa2.25□□□□□ -2.05
HERPUD1-213ENST00000568358 H1FX-AS1Q4G0G2 97 aa2.25□□□□□ -2.05
HERPUD1-213ENST00000568358 A6NN06 94 aa2.24□□□□□ -2.05
HERPUD1-213ENST00000568358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-213ENST00000568358 USH2AO75445 5202 aa2.23□□□□□ -2.05
HERPUD1-213ENST00000568358 MMP24-AS1A0A0U1RRL7 71 aa2.22□□□□□ -2.05
HERPUD1-213ENST00000568358 K7EQZ3 153 aa2.22□□□□□ -2.05
HERPUD1-213ENST00000568358 ROMO1P60602 79 aa2.22□□□□□ -2.05
HERPUD1-213ENST00000568358 SSPOA2VEC9 5147 aa2.21□□□□□ -2.05
HERPUD1-213ENST00000568358 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
HERPUD1-213ENST00000568358 CASC2Q6XLA1 102 aa2.21□□□□□ -2.06
HERPUD1-213ENST00000568358 A0A1W2PPM0 123 aa2.2□□□□□ -2.06
HERPUD1-213ENST00000568358 HCG22E2RYF7 251 aa2.2□□□□□ -2.06
HERPUD1-213ENST00000568358 MT3P25713 68 aa2.2□□□□□ -2.06
HERPUD1-213ENST00000568358 KRTAP19-6Q3LI70 58 aa2.2□□□□□ -2.06
HERPUD1-213ENST00000568358 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
HERPUD1-213ENST00000568358 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
HERPUD1-213ENST00000568358 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
HERPUD1-213ENST00000568358 UBL5Q9BZL1 73 aa2.19□□□□□ -2.06
HERPUD1-213ENST00000568358 COL5A1-AS1Q5SY13 56 aa2.18□□□□□ -2.06
HERPUD1-213ENST00000568358 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
HERPUD1-213ENST00000568358 SERP1Q9Y6X1 66 aa2.18□□□□□ -2.06
HERPUD1-213ENST00000568358 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
HERPUD1-213ENST00000568358 GTF2H5Q6ZYL4 71 aa2.17□□□□□ -2.06
HERPUD1-213ENST00000568358 Q8N9L7 120 aa2.17□□□□□ -2.06
HERPUD1-213ENST00000568358 SPCS1Q9Y6A9 102 aa2.17□□□□□ -2.06
HERPUD1-213ENST00000568358 R4GN34 69 aa2.17□□□□□ -2.06
HERPUD1-213ENST00000568358 SYNE2Q8WXH0 6885 aaKnown RBP2.16□□□□□ -2.06
HERPUD1-213ENST00000568358 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
HERPUD1-213ENST00000568358 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
HERPUD1-213ENST00000568358 TP53AIP1Q9HCN2 124 aa2.16□□□□□ -2.06
HERPUD1-213ENST00000568358 S4R3F8 94 aa2.16□□□□□ -2.06
HERPUD1-213ENST00000568358 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
HERPUD1-213ENST00000568358 P0C880 135 aa2.13□□□□□ -2.07
HERPUD1-213ENST00000568358 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
HERPUD1-213ENST00000568358 Q5VV11 94 aa2.13□□□□□ -2.07
HERPUD1-213ENST00000568358 F8W1H4 67 aa2.11□□□□□ -2.07
HERPUD1-213ENST00000568358 K7EP34 96 aa2.11□□□□□ -2.07
HERPUD1-213ENST00000568358 KLKP1Q107X0 134 aa2.1□□□□□ -2.07
HERPUD1-213ENST00000568358 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
HERPUD1-213ENST00000568358 PRO0461Q9UI25 63 aa2.1□□□□□ -2.07
HERPUD1-213ENST00000568358 LOC101927531A0A1B0GV80 90 aa2.09□□□□□ -2.07
HERPUD1-213ENST00000568358 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
HERPUD1-213ENST00000568358 CYP4F30PQ9H0H9 118 aa2.09□□□□□ -2.07
HERPUD1-213ENST00000568358 CRIPTQ9P021 101 aa2.09□□□□□ -2.07
HERPUD1-213ENST00000568358 TRAV22A0A0B4J277 110 aa2.08□□□□□ -2.08
HERPUD1-213ENST00000568358 NDUFC1O43677 76 aa2.08□□□□□ -2.08
HERPUD1-213ENST00000568358 ACYP1P07311 99 aa2.08□□□□□ -2.08
HERPUD1-213ENST00000568358 ETDBQ3ZM63 59 aa2.08□□□□□ -2.08
HERPUD1-213ENST00000568358 ATOX1O00244 68 aa2.07□□□□□ -2.08
HERPUD1-213ENST00000568358 KRTAP19-8Q3LI54 63 aa2.07□□□□□ -2.08
HERPUD1-213ENST00000568358 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
HERPUD1-213ENST00000568358 MT1BP07438 61 aa2.06□□□□□ -2.08
HERPUD1-213ENST00000568358 H0Y9P7 68 aa2.05□□□□□ -2.08
HERPUD1-213ENST00000568358 MT-ATP8P03928 68 aa2.05□□□□□ -2.08
HERPUD1-213ENST00000568358 KRTAP10-5P60370 271 aa2.05□□□□□ -2.08
HERPUD1-213ENST00000568358 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
HERPUD1-213ENST00000568358 ATP5EP2Q5VTU8 51 aa2.05□□□□□ -2.08
HERPUD1-213ENST00000568358 COX7CP15954 63 aa2.04□□□□□ -2.08
HERPUD1-213ENST00000568358 H0YAA0 97 aa2.03□□□□□ -2.08
HERPUD1-213ENST00000568358 ATP5EP56381 51 aaPredicted RBP2.03□□□□□ -2.08
HERPUD1-213ENST00000568358 MIR22HGQ0VDD5 57 aa2.03□□□□□ -2.08
HERPUD1-213ENST00000568358 Q1T7F1 81 aa2.03□□□□□ -2.08
HERPUD1-213ENST00000568358 A0A087WVE0 104 aa2.02□□□□□ -2.09
HERPUD1-213ENST00000568358 PLAC4Q8WY50 150 aa2.02□□□□□ -2.09
HERPUD1-213ENST00000568358 NEBP20929 6669 aa2.02□□□□□ -2.09
HERPUD1-213ENST00000568358 C20orf197Q8N268 126 aa2.01□□□□□ -2.09
HERPUD1-213ENST00000568358 LINC00208Q96KT6 92 aa2.01□□□□□ -2.09
HERPUD1-213ENST00000568358 A8MU10 97 aa2□□□□□ -2.09
HERPUD1-213ENST00000568358 LINC00643Q86TS7 51 aa2□□□□□ -2.09
HERPUD1-213ENST00000568358 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
HERPUD1-213ENST00000568358 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
HERPUD1-213ENST00000568358 M0QZ58 72 aa1.96□□□□□ -2.1
HERPUD1-213ENST00000568358 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
HERPUD1-213ENST00000568358 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
HERPUD1-213ENST00000568358 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms