RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 FAM236BA0A1B0GV22 79 aa5.1□□□□□ -1.59
CDH3-206ENST00000567674 LINC00643Q86TS7 51 aa5.1□□□□□ -1.59
CDH3-206ENST00000567674 A8MUN3 132 aa5.09□□□□□ -1.59
CDH3-206ENST00000567674 H0YAA0 97 aa5.07□□□□□ -1.6
CDH3-206ENST00000567674 HIST1H4AP62805 103 aaKnown RBP5.07□□□□□ -1.6
CDH3-206ENST00000567674 KLKP1Q107X0 134 aa5.07□□□□□ -1.6
CDH3-206ENST00000567674 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
CDH3-206ENST00000567674 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
CDH3-206ENST00000567674 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
CDH3-206ENST00000567674 IMUPQ9GZP8 106 aa5.06□□□□□ -1.6
CDH3-206ENST00000567674 Q5VV11 94 aa5.05□□□□□ -1.6
CDH3-206ENST00000567674 H0Y9P7 68 aa5.03□□□□□ -1.6
CDH3-206ENST00000567674 NDUFC1O43677 76 aa5.03□□□□□ -1.6
CDH3-206ENST00000567674 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
CDH3-206ENST00000567674 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
CDH3-206ENST00000567674 H3BPC8 53 aa5□□□□□ -1.61
CDH3-206ENST00000567674 J3QR89 54 aa5□□□□□ -1.61
CDH3-206ENST00000567674 MP68P56378 58 aa5□□□□□ -1.61
CDH3-206ENST00000567674 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
CDH3-206ENST00000567674 MT1BP07438 61 aa4.99□□□□□ -1.61
CDH3-206ENST00000567674 A6NN06 94 aa4.98□□□□□ -1.61
CDH3-206ENST00000567674 OCR1Q9BZK8 76 aa4.97□□□□□ -1.61
CDH3-206ENST00000567674 KMT2DO14686 5537 aa4.96□□□□□ -1.61
CDH3-206ENST00000567674 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
CDH3-206ENST00000567674 LINC00208Q96KT6 92 aa4.95□□□□□ -1.62
CDH3-206ENST00000567674 A0A087WVE0 104 aa4.94□□□□□ -1.62
CDH3-206ENST00000567674 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
CDH3-206ENST00000567674 GPR98Q8WXG9 6306 aa4.9□□□□□ -1.63
CDH3-206ENST00000567674 C20orf197Q8N268 126 aa4.89□□□□□ -1.63
CDH3-206ENST00000567674 A0A1B0GV90 55 aa4.88□□□□□ -1.63
CDH3-206ENST00000567674 SCGB1A1P11684 91 aa4.86□□□□□ -1.63
CDH3-206ENST00000567674 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
CDH3-206ENST00000567674 DMAC1Q96GE9 116 aa4.85□□□□□ -1.63
CDH3-206ENST00000567674 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.63
CDH3-206ENST00000567674 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
CDH3-206ENST00000567674 TRAV7A0A075B6U4 112 aa4.82□□□□□ -1.64
CDH3-206ENST00000567674 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
CDH3-206ENST00000567674 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
CDH3-206ENST00000567674 R4GN34 69 aa4.79□□□□□ -1.64
CDH3-206ENST00000567674 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
CDH3-206ENST00000567674 ACYP2P14621 99 aa4.77□□□□□ -1.65
CDH3-206ENST00000567674 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
CDH3-206ENST00000567674 K7ERU9 68 aa4.76□□□□□ -1.65
CDH3-206ENST00000567674 SPRR2EP22531 72 aa4.71□□□□□ -1.66
CDH3-206ENST00000567674 SPRR2BP35325 72 aa4.71□□□□□ -1.66
CDH3-206ENST00000567674 SPRR2AP35326 72 aa4.71□□□□□ -1.66
CDH3-206ENST00000567674 P0C880 135 aa4.7□□□□□ -1.66
CDH3-206ENST00000567674 M0QZ58 72 aa4.69□□□□□ -1.66
CDH3-206ENST00000567674 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
CDH3-206ENST00000567674 MT1XP80297 61 aa4.68□□□□□ -1.66
CDH3-206ENST00000567674 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
CDH3-206ENST00000567674 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
CDH3-206ENST00000567674 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
CDH3-206ENST00000567674 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
CDH3-206ENST00000567674 SPRR2DP22532 72 aa4.57□□□□□ -1.68
CDH3-206ENST00000567674 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
CDH3-206ENST00000567674 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
CDH3-206ENST00000567674 SERP2Q8N6R1 65 aa4.57□□□□□ -1.68
CDH3-206ENST00000567674 LINC01554Q52M75 96 aa4.56□□□□□ -1.68
CDH3-206ENST00000567674 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
CDH3-206ENST00000567674 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
CDH3-206ENST00000567674 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
CDH3-206ENST00000567674 SEC61GP60059 68 aa4.45□□□□□ -1.7
CDH3-206ENST00000567674 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
CDH3-206ENST00000567674 COX7CP15954 63 aa4.42□□□□□ -1.7
CDH3-206ENST00000567674 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
CDH3-206ENST00000567674 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
CDH3-206ENST00000567674 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
CDH3-206ENST00000567674 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
CDH3-206ENST00000567674 COA5Q86WW8 74 aa4.41□□□□□ -1.7
CDH3-206ENST00000567674 CAMK2N1Q7Z7J9 78 aa4.38□□□□□ -1.71
CDH3-206ENST00000567674 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
CDH3-206ENST00000567674 H7BZZ5 65 aa4.34□□□□□ -1.71
CDH3-206ENST00000567674 A0A1B0GU33 70 aa4.32□□□□□ -1.72
CDH3-206ENST00000567674 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
CDH3-206ENST00000567674 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
CDH3-206ENST00000567674 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
CDH3-206ENST00000567674 A0A1B0GU69 56 aa4.23□□□□□ -1.73
CDH3-206ENST00000567674 H3BS24 57 aa4.22□□□□□ -1.73
CDH3-206ENST00000567674 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
CDH3-206ENST00000567674 A0A0D9SG42 100 aa4.21□□□□□ -1.74
CDH3-206ENST00000567674 ATP5EP56381 51 aaPredicted RBP4.21□□□□□ -1.74
CDH3-206ENST00000567674 ANAPC13Q9BS18 74 aa4.21□□□□□ -1.74
CDH3-206ENST00000567674 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
CDH3-206ENST00000567674 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
CDH3-206ENST00000567674 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
CDH3-206ENST00000567674 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
CDH3-206ENST00000567674 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
CDH3-206ENST00000567674 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
CDH3-206ENST00000567674 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
CDH3-206ENST00000567674 MT1EP04732 61 aa4.16□□□□□ -1.74
CDH3-206ENST00000567674 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
CDH3-206ENST00000567674 PRR15LQ9BU68 103 aa4.16□□□□□ -1.74
CDH3-206ENST00000567674 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
CDH3-206ENST00000567674 PCP4P48539 62 aa4.14□□□□□ -1.75
CDH3-206ENST00000567674 MT1GP13640 62 aa4.12□□□□□ -1.75
CDH3-206ENST00000567674 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
CDH3-206ENST00000567674 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CDH3-206ENST00000567674 TNP1P09430 55 aa4.08□□□□□ -1.76
CDH3-206ENST00000567674 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms