RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 KRTAP5-9P26371 169 aa12.1□□□□□ -0.47
UBFD1-206ENST00000566669 ETDBQ3ZM63 59 aa12.07□□□□□ -0.48
UBFD1-206ENST00000566669 H0YAA0 97 aa12.05□□□□□ -0.48
UBFD1-206ENST00000566669 NDUFC1O43677 76 aa12.04□□□□□ -0.48
UBFD1-206ENST00000566669 ATOX1O00244 68 aa12.01□□□□□ -0.49
UBFD1-206ENST00000566669 ACYP1P07311 99 aa12□□□□□ -0.49
UBFD1-206ENST00000566669 KRTAP20-1Q3LI63 56 aa12□□□□□ -0.49
UBFD1-206ENST00000566669 A0A087WVE0 104 aa11.99□□□□□ -0.49
UBFD1-206ENST00000566669 UQCRQO14949 82 aa11.98□□□□□ -0.49
UBFD1-206ENST00000566669 ATP5EP2Q5VTU8 51 aa11.97□□□□□ -0.49
UBFD1-206ENST00000566669 A8MUN3 132 aa11.93□□□□□ -0.5
UBFD1-206ENST00000566669 KMT2DO14686 5537 aa11.9□□□□□ -0.5
UBFD1-206ENST00000566669 H0Y9P7 68 aa11.88□□□□□ -0.51
UBFD1-206ENST00000566669 FAM240AA0A1B0GVK7 77 aa11.87□□□□□ -0.51
UBFD1-206ENST00000566669 PRO2289Q9P1D8 64 aa11.86□□□□□ -0.51
UBFD1-206ENST00000566669 HIST1H4AP62805 103 aaKnown RBP11.85□□□□□ -0.51
UBFD1-206ENST00000566669 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
UBFD1-206ENST00000566669 MDN1Q9NU22 5596 aa11.82□□□□□ -0.52
UBFD1-206ENST00000566669 ADM2Q7Z4H4 148 aa11.79□□□□□ -0.52
UBFD1-206ENST00000566669 PLAC4Q8WY50 150 aa11.7□□□□□ -0.54
UBFD1-206ENST00000566669 C20orf197Q8N268 126 aa11.66□□□□□ -0.54
UBFD1-206ENST00000566669 LINC00208Q96KT6 92 aa11.66□□□□□ -0.54
UBFD1-206ENST00000566669 KRTAP2-3P0C7H8 128 aa11.64□□□□□ -0.55
UBFD1-206ENST00000566669 MP68P56378 58 aa11.64□□□□□ -0.55
UBFD1-206ENST00000566669 KRTAP2-4Q9BYR9 128 aa11.64□□□□□ -0.55
UBFD1-206ENST00000566669 LINC00643Q86TS7 51 aa11.62□□□□□ -0.55
UBFD1-206ENST00000566669 SPRR2FQ96RM1 72 aa11.62□□□□□ -0.55
UBFD1-206ENST00000566669 MT1XP80297 61 aa11.61□□□□□ -0.55
UBFD1-206ENST00000566669 R4GN34 69 aa11.6□□□□□ -0.55
UBFD1-206ENST00000566669 SPRR2EP22531 72 aa11.52□□□□□ -0.57
UBFD1-206ENST00000566669 SPRR2BP35325 72 aa11.52□□□□□ -0.57
UBFD1-206ENST00000566669 SPRR2AP35326 72 aa11.52□□□□□ -0.57
UBFD1-206ENST00000566669 KRTAP12-2P59991 146 aa11.51□□□□□ -0.57
UBFD1-206ENST00000566669 KRTAP8-1Q8IUC2 63 aa11.51□□□□□ -0.57
UBFD1-206ENST00000566669 OCR1Q9BZK8 76 aa11.51□□□□□ -0.57
UBFD1-206ENST00000566669 H3BPC8 53 aa11.47□□□□□ -0.57
UBFD1-206ENST00000566669 M0QZ58 72 aa11.43□□□□□ -0.58
UBFD1-206ENST00000566669 P0C880 135 aa11.42□□□□□ -0.58
UBFD1-206ENST00000566669 DMAC1Q96GE9 116 aa11.38□□□□□ -0.59
UBFD1-206ENST00000566669 LCE1AQ5T7P2 110 aa11.32□□□□□ -0.6
UBFD1-206ENST00000566669 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
UBFD1-206ENST00000566669 KRTAP2-2Q9BYT5 123 aa11.25□□□□□ -0.61
UBFD1-206ENST00000566669 KRTAP2-1Q9BYU5 128 aa11.25□□□□□ -0.61
UBFD1-206ENST00000566669 LINC01554Q52M75 96 aa11.24□□□□□ -0.61
UBFD1-206ENST00000566669 A0A1B0GV90 55 aa11.22□□□□□ -0.61
UBFD1-206ENST00000566669 TRAV7A0A075B6U4 112 aa11.21□□□□□ -0.61
UBFD1-206ENST00000566669 SCGB1A1P11684 91 aa11.21□□□□□ -0.61
UBFD1-206ENST00000566669 SPRR2DP22532 72 aa11.16□□□□□ -0.62
UBFD1-206ENST00000566669 J3QR89 54 aa11.15□□□□□ -0.62
UBFD1-206ENST00000566669 KRTAP4-8A0A0G2JLE6 195 aa11.14□□□□□ -0.63
UBFD1-206ENST00000566669 KRTAP4-8Q9BYQ9 185 aa11.14□□□□□ -0.63
UBFD1-206ENST00000566669 SPTSSBQ8NFR3 76 aa11.12□□□□□ -0.63
UBFD1-206ENST00000566669 ACYP2P14621 99 aa11.1□□□□□ -0.63
UBFD1-206ENST00000566669 KRTAP10-12P60413 245 aa11.07□□□□□ -0.64
UBFD1-206ENST00000566669 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
UBFD1-206ENST00000566669 KRTAP10-7P60409 375 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-206ENST00000566669 SMIM20Q8N5G0 67 aa10.9□□□□□ -0.66
UBFD1-206ENST00000566669 LCE3BQ5TA77 95 aa10.88□□□□□ -0.67
UBFD1-206ENST00000566669 CHKB-CPT1BH3BT56 60 aa10.87□□□□□ -0.67
UBFD1-206ENST00000566669 CAMK2N1Q7Z7J9 78 aa10.62□□□□□ -0.71
UBFD1-206ENST00000566669 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
UBFD1-206ENST00000566669 SNURFQ9Y675 71 aa10.52□□□□□ -0.73
UBFD1-206ENST00000566669 K7ERU9 68 aa10.49□□□□□ -0.73
UBFD1-206ENST00000566669 KRTAP13-4Q3LI77 160 aa10.48□□□□□ -0.73
UBFD1-206ENST00000566669 LCE5AQ5TCM9 118 aa10.42□□□□□ -0.74
UBFD1-206ENST00000566669 KRTAP19-7Q3SYF9 63 aa10.37□□□□□ -0.75
UBFD1-206ENST00000566669 KRTAP19-3Q7Z4W3 81 aa10.35□□□□□ -0.75
UBFD1-206ENST00000566669 SEC61GP60059 68 aa10.34□□□□□ -0.75
UBFD1-206ENST00000566669 MT1EP04732 61 aa10.32□□□□□ -0.76
UBFD1-206ENST00000566669 SERP2Q8N6R1 65 aa10.3□□□□□ -0.76
UBFD1-206ENST00000566669 SERP1Q9Y6X1 66 aa10.3□□□□□ -0.76
UBFD1-206ENST00000566669 DSTQ03001 7570 aaKnown RBP10.27□□□□□ -0.76
UBFD1-206ENST00000566669 COA5Q86WW8 74 aa10.23□□□□□ -0.77
UBFD1-206ENST00000566669 A0A0D9SG42 100 aa10.18□□□□□ -0.78
UBFD1-206ENST00000566669 GPR98Q8WXG9 6306 aa10.14□□□□□ -0.79
UBFD1-206ENST00000566669 CYSTM1Q9H1C7 97 aa10.13□□□□□ -0.79
UBFD1-206ENST00000566669 MT1GP13640 62 aa10.11□□□□□ -0.79
UBFD1-206ENST00000566669 A0A1B0GU33 70 aa10.1□□□□□ -0.79
UBFD1-206ENST00000566669 SPINT4Q6UDR6 99 aa10.1□□□□□ -0.79
UBFD1-206ENST00000566669 PP632Q6XCG6 107 aa10.1□□□□□ -0.79
UBFD1-206ENST00000566669 KRTAP4-9Q9BYQ8 210 aa10.1□□□□□ -0.79
UBFD1-206ENST00000566669 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
UBFD1-206ENST00000566669 KRTAP19-5Q3LI72 72 aa10.02□□□□□ -0.81
UBFD1-206ENST00000566669 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
UBFD1-206ENST00000566669 LCE4AQ5TA78 99 aa9.91□□□□□ -0.82
UBFD1-206ENST00000566669 LCE1DQ5T752 114 aa9.9□□□□□ -0.82
UBFD1-206ENST00000566669 SMIM26A0A096LP01 95 aa9.88□□□□□ -0.83
UBFD1-206ENST00000566669 COX7CP15954 63 aa9.86□□□□□ -0.83
UBFD1-206ENST00000566669 MT1MQ8N339 61 aa9.85□□□□□ -0.83
UBFD1-206ENST00000566669 MT1LQ93083 61 aa9.81□□□□□ -0.84
UBFD1-206ENST00000566669 A0A1B0GU69 56 aa9.78□□□□□ -0.84
UBFD1-206ENST00000566669 H7BZZ5 65 aa9.77□□□□□ -0.85
UBFD1-206ENST00000566669 HMCN1Q96RW7 5635 aa9.76□□□□□ -0.85
UBFD1-206ENST00000566669 TNP1P09430 55 aa9.72□□□□□ -0.85
UBFD1-206ENST00000566669 MT4P47944 62 aa9.71□□□□□ -0.86
UBFD1-206ENST00000566669 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
UBFD1-206ENST00000566669 LCE3AQ5TA76 89 aa9.63□□□□□ -0.87
UBFD1-206ENST00000566669 KRTAP5-4Q6L8H1 288 aa9.62□□□□□ -0.87
UBFD1-206ENST00000566669 A8MU10 97 aa9.6□□□□□ -0.87
UBFD1-206ENST00000566669 ANAPC13Q9BS18 74 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms