RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CRIPTQ9P021 101 aa8□□□□□ -1.13
USB1-213ENST00000566292 PCP4L1A6NKN8 68 aa7.96□□□□□ -1.14
USB1-213ENST00000566292 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
USB1-213ENST00000566292 ACYP1P07311 99 aa7.94□□□□□ -1.14
USB1-213ENST00000566292 H0Y9P7 68 aa7.92□□□□□ -1.14
USB1-213ENST00000566292 UQCRQO14949 82 aa7.92□□□□□ -1.14
USB1-213ENST00000566292 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
USB1-213ENST00000566292 HIST1H4AP62805 103 aaKnown RBP7.91□□□□□ -1.14
USB1-213ENST00000566292 ATP5EP2Q5VTU8 51 aa7.91□□□□□ -1.14
USB1-213ENST00000566292 H0YAA0 97 aa7.9□□□□□ -1.14
USB1-213ENST00000566292 NDUFC1O43677 76 aa7.9□□□□□ -1.14
USB1-213ENST00000566292 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
USB1-213ENST00000566292 ATOX1O00244 68 aa7.88□□□□□ -1.15
USB1-213ENST00000566292 KMT2DO14686 5537 aa7.84□□□□□ -1.15
USB1-213ENST00000566292 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
USB1-213ENST00000566292 A8MUN3 132 aa7.81□□□□□ -1.16
USB1-213ENST00000566292 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
USB1-213ENST00000566292 MDN1Q9NU22 5596 aa7.8□□□□□ -1.16
USB1-213ENST00000566292 LINC00208Q96KT6 92 aa7.78□□□□□ -1.16
USB1-213ENST00000566292 LINC00643Q86TS7 51 aa7.75□□□□□ -1.17
USB1-213ENST00000566292 MT1XP80297 61 aa7.71□□□□□ -1.18
USB1-213ENST00000566292 OCR1Q9BZK8 76 aa7.71□□□□□ -1.18
USB1-213ENST00000566292 MP68P56378 58 aa7.68□□□□□ -1.18
USB1-213ENST00000566292 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
USB1-213ENST00000566292 P0C880 135 aa7.64□□□□□ -1.19
USB1-213ENST00000566292 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
USB1-213ENST00000566292 SPRR2FQ96RM1 72 aa7.63□□□□□ -1.19
USB1-213ENST00000566292 R4GN34 69 aa7.61□□□□□ -1.19
USB1-213ENST00000566292 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
USB1-213ENST00000566292 M0QZ58 72 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 KRTAP2-3P0C7H8 128 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 SPRR2EP22531 72 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 SPRR2BP35325 72 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 SPRR2AP35326 72 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 KRTAP2-4Q9BYR9 128 aa7.56□□□□□ -1.2
USB1-213ENST00000566292 H3BPC8 53 aa7.55□□□□□ -1.2
USB1-213ENST00000566292 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
USB1-213ENST00000566292 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
USB1-213ENST00000566292 A0A1B0GV90 55 aa7.52□□□□□ -1.21
USB1-213ENST00000566292 LINC01554Q52M75 96 aa7.46□□□□□ -1.22
USB1-213ENST00000566292 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
USB1-213ENST00000566292 LCE1AQ5T7P2 110 aa7.45□□□□□ -1.22
USB1-213ENST00000566292 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
USB1-213ENST00000566292 SCGB1A1P11684 91 aa7.43□□□□□ -1.22
USB1-213ENST00000566292 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
USB1-213ENST00000566292 J3QR89 54 aa7.38□□□□□ -1.23
USB1-213ENST00000566292 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
USB1-213ENST00000566292 ACYP2P14621 99 aa7.32□□□□□ -1.24
USB1-213ENST00000566292 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
USB1-213ENST00000566292 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
USB1-213ENST00000566292 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
USB1-213ENST00000566292 SPRR2DP22532 72 aa7.3□□□□□ -1.24
USB1-213ENST00000566292 MT-ATP8P03928 68 aa7.25□□□□□ -1.25
USB1-213ENST00000566292 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
USB1-213ENST00000566292 SMIM20Q8N5G0 67 aa7.18□□□□□ -1.26
USB1-213ENST00000566292 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
USB1-213ENST00000566292 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
USB1-213ENST00000566292 SNURFQ9Y675 71 aa7.12□□□□□ -1.27
USB1-213ENST00000566292 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
USB1-213ENST00000566292 K7ERU9 68 aa7.03□□□□□ -1.28
USB1-213ENST00000566292 SPANXA2-OT1Q8N9U9 137 aa7.03□□□□□ -1.28
USB1-213ENST00000566292 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
USB1-213ENST00000566292 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
USB1-213ENST00000566292 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
USB1-213ENST00000566292 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
USB1-213ENST00000566292 COA5Q86WW8 74 aa6.86□□□□□ -1.31
USB1-213ENST00000566292 MT1EP04732 61 aa6.85□□□□□ -1.31
USB1-213ENST00000566292 DSTQ03001 7570 aaKnown RBP6.84□□□□□ -1.31
USB1-213ENST00000566292 A0A0D9SG42 100 aa6.81□□□□□ -1.32
USB1-213ENST00000566292 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
USB1-213ENST00000566292 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
USB1-213ENST00000566292 SEC61GP60059 68 aa6.76□□□□□ -1.33
USB1-213ENST00000566292 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
USB1-213ENST00000566292 SPINT4Q6UDR6 99 aa6.71□□□□□ -1.34
USB1-213ENST00000566292 A0A1B0GU33 70 aa6.69□□□□□ -1.34
USB1-213ENST00000566292 KRTAP4-9Q9BYQ8 210 aa6.69□□□□□ -1.34
USB1-213ENST00000566292 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
USB1-213ENST00000566292 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
USB1-213ENST00000566292 CYSTM1Q9H1C7 97 aa6.65□□□□□ -1.34
USB1-213ENST00000566292 COX7CP15954 63 aa6.63□□□□□ -1.35
USB1-213ENST00000566292 MT1GP13640 62 aa6.62□□□□□ -1.35
USB1-213ENST00000566292 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
USB1-213ENST00000566292 H7BZZ5 65 aa6.6□□□□□ -1.35
USB1-213ENST00000566292 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
USB1-213ENST00000566292 MT1MQ8N339 61 aa6.53□□□□□ -1.36
USB1-213ENST00000566292 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
USB1-213ENST00000566292 MT1LQ93083 61 aa6.52□□□□□ -1.37
USB1-213ENST00000566292 SMIM26A0A096LP01 95 aa6.49□□□□□ -1.37
USB1-213ENST00000566292 A8MU10 97 aa6.49□□□□□ -1.37
USB1-213ENST00000566292 A0A1B0GU69 56 aa6.48□□□□□ -1.37
USB1-213ENST00000566292 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
USB1-213ENST00000566292 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
USB1-213ENST00000566292 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
USB1-213ENST00000566292 MT4P47944 62 aa6.41□□□□□ -1.38
USB1-213ENST00000566292 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
USB1-213ENST00000566292 HMCN1Q96RW7 5635 aa6.4□□□□□ -1.39
USB1-213ENST00000566292 TNP1P09430 55 aa6.38□□□□□ -1.39
USB1-213ENST00000566292 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms