RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 A0A1B0GU33 70 aa5.93□□□□□ -1.46
TCF4-232ENST00000566286 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
TCF4-232ENST00000566286 KMT2CQ8NEZ4 4911 aaKnown RBP5.92□□□□□ -1.46
TCF4-232ENST00000566286 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.47
TCF4-232ENST00000566286 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
TCF4-232ENST00000566286 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
TCF4-232ENST00000566286 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
TCF4-232ENST00000566286 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
TCF4-232ENST00000566286 FAT1Q14517 4588 aa5.83□□□□□ -1.48
TCF4-232ENST00000566286 KRTAP10-4P60372 401 aaPredicted RBP5.81□□□□□ -1.48
TCF4-232ENST00000566286 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
TCF4-232ENST00000566286 RYR3Q15413 4870 aa5.78□□□□□ -1.48
TCF4-232ENST00000566286 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
TCF4-232ENST00000566286 ROMO1P60602 79 aa5.74□□□□□ -1.49
TCF4-232ENST00000566286 HSPG2P98160 4391 aa5.69□□□□□ -1.5
TCF4-232ENST00000566286 RYR1P21817 5038 aa5.69□□□□□ -1.5
TCF4-232ENST00000566286 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
TCF4-232ENST00000566286 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.51
TCF4-232ENST00000566286 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
TCF4-232ENST00000566286 CRIPTQ9P021 101 aa5.64□□□□□ -1.51
TCF4-232ENST00000566286 Q5VSD8 79 aa5.63□□□□□ -1.51
TCF4-232ENST00000566286 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
TCF4-232ENST00000566286 TNXBP22105 4242 aa5.6□□□□□ -1.51
TCF4-232ENST00000566286 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
TCF4-232ENST00000566286 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
TCF4-232ENST00000566286 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.51
TCF4-232ENST00000566286 S4R3F8 94 aa5.59□□□□□ -1.52
TCF4-232ENST00000566286 A0A0D9SG42 100 aa5.57□□□□□ -1.52
TCF4-232ENST00000566286 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
TCF4-232ENST00000566286 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
TCF4-232ENST00000566286 EPPK1P58107 5090 aaKnown RBP5.56□□□□□ -1.52
TCF4-232ENST00000566286 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
TCF4-232ENST00000566286 P0C880 135 aa5.51□□□□□ -1.53
TCF4-232ENST00000566286 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
TCF4-232ENST00000566286 XP32Q5T750 250 aa5.51□□□□□ -1.53
TCF4-232ENST00000566286 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
TCF4-232ENST00000566286 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
TCF4-232ENST00000566286 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
TCF4-232ENST00000566286 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
TCF4-232ENST00000566286 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
TCF4-232ENST00000566286 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
TCF4-232ENST00000566286 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
TCF4-232ENST00000566286 KRTAP12-1P59990 96 aa5.41□□□□□ -1.54
TCF4-232ENST00000566286 M0QZ58 72 aa5.4□□□□□ -1.54
TCF4-232ENST00000566286 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
TCF4-232ENST00000566286 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
TCF4-232ENST00000566286 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
TCF4-232ENST00000566286 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
TCF4-232ENST00000566286 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
TCF4-232ENST00000566286 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
TCF4-232ENST00000566286 R4GN34 69 aa5.27□□□□□ -1.57
TCF4-232ENST00000566286 HERC2O95714 4834 aa5.27□□□□□ -1.57
TCF4-232ENST00000566286 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
TCF4-232ENST00000566286 LRP2P98164 4655 aa5.22□□□□□ -1.57
TCF4-232ENST00000566286 LPAP08519 4548 aa5.2□□□□□ -1.58
TCF4-232ENST00000566286 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
TCF4-232ENST00000566286 PRO2289Q9P1D8 64 aa5.06□□□□□ -1.6
TCF4-232ENST00000566286 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
TCF4-232ENST00000566286 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
TCF4-232ENST00000566286 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
TCF4-232ENST00000566286 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
TCF4-232ENST00000566286 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
TCF4-232ENST00000566286 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
TCF4-232ENST00000566286 HERC1Q15751 4861 aa4.97□□□□□ -1.61
TCF4-232ENST00000566286 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.62
TCF4-232ENST00000566286 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
TCF4-232ENST00000566286 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
TCF4-232ENST00000566286 MUC2Q02817 5179 aa4.83□□□□□ -1.64
TCF4-232ENST00000566286 TNP1P09430 55 aa4.81□□□□□ -1.64
TCF4-232ENST00000566286 MT3P25713 68 aa4.8□□□□□ -1.64
TCF4-232ENST00000566286 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
TCF4-232ENST00000566286 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
TCF4-232ENST00000566286 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
TCF4-232ENST00000566286 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
TCF4-232ENST00000566286 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
TCF4-232ENST00000566286 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
TCF4-232ENST00000566286 UBR4Q5T4S7 5183 aa4.7□□□□□ -1.66
TCF4-232ENST00000566286 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
TCF4-232ENST00000566286 FAT4Q6V0I7 4981 aa4.65□□□□□ -1.67
TCF4-232ENST00000566286 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
TCF4-232ENST00000566286 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
TCF4-232ENST00000566286 MT1HP80294 61 aa4.58□□□□□ -1.68
TCF4-232ENST00000566286 M0R2T5 61 aa4.52□□□□□ -1.69
TCF4-232ENST00000566286 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
TCF4-232ENST00000566286 MT2AP02795 61 aa4.45□□□□□ -1.7
TCF4-232ENST00000566286 INE1O15225 51 aa4.44□□□□□ -1.7
TCF4-232ENST00000566286 MT1FP04733 61 aa4.44□□□□□ -1.7
TCF4-232ENST00000566286 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
TCF4-232ENST00000566286 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
TCF4-232ENST00000566286 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
TCF4-232ENST00000566286 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
TCF4-232ENST00000566286 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
TCF4-232ENST00000566286 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
TCF4-232ENST00000566286 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
TCF4-232ENST00000566286 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
TCF4-232ENST00000566286 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
TCF4-232ENST00000566286 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
TCF4-232ENST00000566286 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
TCF4-232ENST00000566286 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
TCF4-232ENST00000566286 MT1XP80297 61 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms