RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SERP1Q9Y6X1 66 aa1.54□□□□□ -2.16
CNOT1-209ENST00000566240 NBEAL2Q6ZNJ1 2754 aa1.54□□□□□ -2.16
CNOT1-209ENST00000566240 COL6A5A8TX70 2615 aa1.53□□□□□ -2.16
CNOT1-209ENST00000566240 SPINK1P00995 79 aa1.53□□□□□ -2.16
CNOT1-209ENST00000566240 RPS29P62273 56 aaKnown RBP1.53□□□□□ -2.16
CNOT1-209ENST00000566240 ASB16-AS1Q495Z4 193 aa1.53□□□□□ -2.16
CNOT1-209ENST00000566240 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
CNOT1-209ENST00000566240 MRPL34Q9BQ48 92 aaKnown RBP1.53□□□□□ -2.16
CNOT1-209ENST00000566240 LINC00472Q9H8W2 130 aa1.53□□□□□ -2.16
CNOT1-209ENST00000566240 TENM3Q9P273 2699 aa1.53□□□□□ -2.16
CNOT1-209ENST00000566240 MMP24-AS1A0A0U1RRL7 71 aa1.52□□□□□ -2.17
CNOT1-209ENST00000566240 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
CNOT1-209ENST00000566240 H7BZZ5 65 aa1.52□□□□□ -2.17
CNOT1-209ENST00000566240 Q5XG85 94 aa1.52□□□□□ -2.17
CNOT1-209ENST00000566240 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
CNOT1-209ENST00000566240 NOTCH1P46531 2555 aa1.52□□□□□ -2.17
CNOT1-209ENST00000566240 NBEAL1Q6ZS30 2694 aa1.51□□□□□ -2.17
CNOT1-209ENST00000566240 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
CNOT1-209ENST00000566240 CHKB-CPT1BH3BT56 60 aa1.5□□□□□ -2.17
CNOT1-209ENST00000566240 Q96NJ1 140 aa1.5□□□□□ -2.17
CNOT1-209ENST00000566240 FLG2Q5D862 2391 aaPredicted RBP1.49□□□□□ -2.17
CNOT1-209ENST00000566240 Q5VSD8 79 aa1.49□□□□□ -2.17
CNOT1-209ENST00000566240 SPTSSBQ8NFR3 76 aa1.49□□□□□ -2.17
CNOT1-209ENST00000566240 CYP4F30PQ9H0H9 118 aa1.49□□□□□ -2.17
CNOT1-209ENST00000566240 SMR3BP02814 79 aaPredicted RBP1.48□□□□□ -2.17
CNOT1-209ENST00000566240 PRR15LQ9BU68 103 aa1.48□□□□□ -2.17
CNOT1-209ENST00000566240 STAB2Q8WWQ8 2551 aa1.48□□□□□ -2.17
CNOT1-209ENST00000566240 ACYP2P14621 99 aa1.47□□□□□ -2.17
CNOT1-209ENST00000566240 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
CNOT1-209ENST00000566240 PKD1L1Q8TDX9 2849 aa1.47□□□□□ -2.17
CNOT1-209ENST00000566240 TRRAPQ9Y4A5 3859 aa1.46□□□□□ -2.18
CNOT1-209ENST00000566240 HUWE1Q7Z6Z7 4374 aaKnown RBP1.46□□□□□ -2.18
CNOT1-209ENST00000566240 COL7A1Q02388 2944 aa1.45□□□□□ -2.18
CNOT1-209ENST00000566240 ATP11AUNQ6ZP68 121 aa1.45□□□□□ -2.18
CNOT1-209ENST00000566240 ANK2Q01484 3957 aa1.45□□□□□ -2.18
CNOT1-209ENST00000566240 C9orf92A6NGG3 77 aa1.44□□□□□ -2.18
CNOT1-209ENST00000566240 DMAC1Q96GE9 116 aa1.44□□□□□ -2.18
CNOT1-209ENST00000566240 DNAH3Q8TD57 4116 aa1.44□□□□□ -2.18
CNOT1-209ENST00000566240 A0A1B0GU69 56 aa1.43□□□□□ -2.18
CNOT1-209ENST00000566240 ALMS1Q8TCU4 4167 aa1.42□□□□□ -2.18
CNOT1-209ENST00000566240 MEGF8Q7Z7M0 2845 aa1.41□□□□□ -2.18
CNOT1-209ENST00000566240 TENM2Q9NT68 2774 aa1.41□□□□□ -2.18
CNOT1-209ENST00000566240 LINC01558Q9Y6Z2 57 aa1.41□□□□□ -2.18
CNOT1-209ENST00000566240 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
CNOT1-209ENST00000566240 DNAH9Q9NYC9 4486 aa1.4□□□□□ -2.18
CNOT1-209ENST00000566240 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
CNOT1-209ENST00000566240 CMYA5Q8N3K9 4069 aa1.4□□□□□ -2.19
CNOT1-209ENST00000566240 UQCR11O14957 56 aa1.39□□□□□ -2.19
CNOT1-209ENST00000566240 SPINK7P58062 85 aa1.39□□□□□ -2.19
CNOT1-209ENST00000566240 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
CNOT1-209ENST00000566240 STARD9Q9P2P6 4700 aa1.38□□□□□ -2.19
CNOT1-209ENST00000566240 TGP01266 2768 aa1.38□□□□□ -2.19
CNOT1-209ENST00000566240 Q5VV11 94 aa1.38□□□□□ -2.19
CNOT1-209ENST00000566240 COX6B2Q6YFQ2 88 aa1.38□□□□□ -2.19
CNOT1-209ENST00000566240 S4R3F8 94 aa1.38□□□□□ -2.19
CNOT1-209ENST00000566240 DNAH1Q9P2D7 4330 aa1.37□□□□□ -2.19
CNOT1-209ENST00000566240 PRKDCP78527 4128 aaKnown RBP1.37□□□□□ -2.19
CNOT1-209ENST00000566240 A6NN06 94 aa1.37□□□□□ -2.19
CNOT1-209ENST00000566240 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
CNOT1-209ENST00000566240 DYNC2H1Q8NCM8 4307 aaKnown RBP1.36□□□□□ -2.19
CNOT1-209ENST00000566240 CSMD3Q7Z407 3707 aa1.36□□□□□ -2.19
CNOT1-209ENST00000566240 VPS13DQ5THJ4 4388 aa1.35□□□□□ -2.19
CNOT1-209ENST00000566240 LYSTQ99698 3801 aa1.35□□□□□ -2.19
CNOT1-209ENST00000566240 MT1HL1P0DM35 61 aa1.34□□□□□ -2.19
CNOT1-209ENST00000566240 H1FX-AS1Q4G0G2 97 aa1.34□□□□□ -2.19
CNOT1-209ENST00000566240 DNAH7Q8WXX0 4024 aa1.34□□□□□ -2.2
CNOT1-209ENST00000566240 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
CNOT1-209ENST00000566240 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
CNOT1-209ENST00000566240 PLECQ15149 4684 aaKnown RBP1.33□□□□□ -2.2
CNOT1-209ENST00000566240 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
CNOT1-209ENST00000566240 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
CNOT1-209ENST00000566240 DNAH17Q9UFH2 4485 aa1.32□□□□□ -2.2
CNOT1-209ENST00000566240 KMT2AQ03164 3969 aa1.31□□□□□ -2.2
CNOT1-209ENST00000566240 SPATA8Q6RVD6 105 aa1.31□□□□□ -2.2
CNOT1-209ENST00000566240 FRAS1Q86XX4 4008 aa1.3□□□□□ -2.2
CNOT1-209ENST00000566240 SRRM2Q9UQ35 2752 aaKnown RBP1.3□□□□□ -2.2
CNOT1-209ENST00000566240 HYDINQ4G0P3 5121 aa1.28□□□□□ -2.2
CNOT1-209ENST00000566240 H0YAA0 97 aa1.28□□□□□ -2.2
CNOT1-209ENST00000566240 M0QZ58 72 aa1.28□□□□□ -2.2
CNOT1-209ENST00000566240 DNAH8Q96JB1 4490 aa1.27□□□□□ -2.21
CNOT1-209ENST00000566240 FAT2Q9NYQ8 4349 aa1.27□□□□□ -2.21
CNOT1-209ENST00000566240 PKD1P98161 4303 aa1.27□□□□□ -2.21
CNOT1-209ENST00000566240 DNAH2Q9P225 4427 aa1.26□□□□□ -2.21
CNOT1-209ENST00000566240 A0A0D9SG42 100 aa1.26□□□□□ -2.21
CNOT1-209ENST00000566240 HECTD4Q9Y4D8 3996 aa1.26□□□□□ -2.21
CNOT1-209ENST00000566240 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
CNOT1-209ENST00000566240 RYR2Q92736 4967 aa1.26□□□□□ -2.21
CNOT1-209ENST00000566240 DNAH11Q96DT5 4516 aa1.25□□□□□ -2.21
CNOT1-209ENST00000566240 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
CNOT1-209ENST00000566240 PKHD1P08F94 4074 aa1.25□□□□□ -2.21
CNOT1-209ENST00000566240 M0R2T5 61 aa1.25□□□□□ -2.21
CNOT1-209ENST00000566240 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
CNOT1-209ENST00000566240 VPS13BQ7Z7G8 4022 aa1.24□□□□□ -2.21
CNOT1-209ENST00000566240 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
CNOT1-209ENST00000566240 LRP1BQ9NZR2 4599 aa1.23□□□□□ -2.21
CNOT1-209ENST00000566240 APOBP04114 4563 aaKnown RBP1.23□□□□□ -2.21
CNOT1-209ENST00000566240 PKHD1L1Q86WI1 4243 aa1.22□□□□□ -2.21
CNOT1-209ENST00000566240 DYNC1H1Q14204 4646 aaKnown RBP1.21□□□□□ -2.22
CNOT1-209ENST00000566240 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
CNOT1-209ENST00000566240 HSPG2P98160 4391 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms