RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 ACANP16112 2415 aa0.73□□□□□ -2.29
PALB2-204ENST00000566069 HIVEP3Q5T1R4 2406 aa0.73□□□□□ -2.29
PALB2-204ENST00000566069 FAM186AA6NE01 2351 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 HRNRQ86YZ3 2850 aaPredicted RBP0.72□□□□□ -2.29
PALB2-204ENST00000566069 LRRK2Q5S007 2527 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 NCOR2Q9Y618 2525 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 NBEAL2Q6ZNJ1 2754 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
PALB2-204ENST00000566069 ANK3Q12955 4377 aaKnown RBP0.72□□□□□ -2.29
PALB2-204ENST00000566069 ANKHD1Q8IWZ3 2542 aaKnown RBP0.72□□□□□ -2.29
PALB2-204ENST00000566069 APCP25054 2843 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 DNAH10Q8IVF4 4471 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 PKHD1L1Q86WI1 4243 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 SRCAPQ6ZRS2 3230 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 GCN1Q92616 2671 aaKnown RBP0.71□□□□□ -2.3
PALB2-204ENST00000566069 U3KQA8 63 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 CELSR3Q9NYQ7 3312 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
PALB2-204ENST00000566069 CMYA5Q8N3K9 4069 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
PALB2-204ENST00000566069 SPEGQ15772 3267 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 PKD1P98161 4303 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 LAMA5O15230 3695 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 TEX15Q9BXT5 2789 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 VPS13AQ96RL7 3174 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 CFAP46Q8IYW2 2715 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 TRRAPQ9Y4A5 3859 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 DCHS1Q96JQ0 3298 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 ADGRG4Q8IZF6 3080 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 DNAH1Q9P2D7 4330 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 LAMA1P25391 3075 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 CSMD1Q96PZ7 3565 aa0.7□□□□□ -2.3
PALB2-204ENST00000566069 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
PALB2-204ENST00000566069 SMR3AQ99954 134 aa0.69□□□□□ -2.3
PALB2-204ENST00000566069 MTORP42345 2549 aa0.69□□□□□ -2.3
PALB2-204ENST00000566069 SPTAN1Q13813 2472 aaKnown RBP0.69□□□□□ -2.3
PALB2-204ENST00000566069 HSPG2P98160 4391 aa0.68□□□□□ -2.3
PALB2-204ENST00000566069 HUWE1Q7Z6Z7 4374 aaKnown RBP0.68□□□□□ -2.3
PALB2-204ENST00000566069 DNAH9Q9NYC9 4486 aa0.68□□□□□ -2.3
PALB2-204ENST00000566069 FREM2Q5SZK8 3169 aa0.68□□□□□ -2.3
PALB2-204ENST00000566069 ANKRD11Q6UB99 2663 aaPredicted RBP0.68□□□□□ -2.3
PALB2-204ENST00000566069 SVEP1Q4LDE5 3571 aa0.68□□□□□ -2.3
PALB2-204ENST00000566069 TGP01266 2768 aa0.68□□□□□ -2.3
PALB2-204ENST00000566069 CUBNO60494 3623 aa0.68□□□□□ -2.3
PALB2-204ENST00000566069 FAT3Q8TDW7 4589 aa0.67□□□□□ -2.3
PALB2-204ENST00000566069 NIPBLQ6KC79 2804 aaeCLIP0.67□□□□□ -2.3
PALB2-204ENST00000566069 DNAH6Q9C0G6 4158 aa0.67□□□□□ -2.3
PALB2-204ENST00000566069 LAMA2P24043 3122 aaKnown RBP0.67□□□□□ -2.3
PALB2-204ENST00000566069 ITPR2Q14571 2701 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 ASPMQ8IZT6 3477 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 PCNTO95613 3336 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 UTRNP46939 3433 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 GOLGB1Q14789 3259 aaKnown RBP0.66□□□□□ -2.3
PALB2-204ENST00000566069 DNAH17Q9UFH2 4485 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 PRM1P04553 51 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 RPS29P62273 56 aaKnown RBP0.66□□□□□ -2.3
PALB2-204ENST00000566069 KRTAP8-1Q8IUC2 63 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 CSMD2Q7Z408 3487 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 CACNA1AO00555 2505 aa0.66□□□□□ -2.3
PALB2-204ENST00000566069 EP400Q96L91 3159 aa0.65□□□□□ -2.3
PALB2-204ENST00000566069 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
PALB2-204ENST00000566069 CENPEQ02224 2701 aa0.65□□□□□ -2.31
PALB2-204ENST00000566069 STAB1Q9NY15 2570 aa0.65□□□□□ -2.31
PALB2-204ENST00000566069 APOBP04114 4563 aaKnown RBP0.65□□□□□ -2.31
PALB2-204ENST00000566069 HIVEP1P15822 2718 aa0.65□□□□□ -2.31
PALB2-204ENST00000566069 DOPEY1Q5JWR5 2465 aa0.64□□□□□ -2.31
PALB2-204ENST00000566069 USP9XQ93008 2570 aaPredicted RBP0.64□□□□□ -2.31
PALB2-204ENST00000566069 SMR3BP02814 79 aaPredicted RBP0.64□□□□□ -2.31
PALB2-204ENST00000566069 ACACBO00763 2458 aa0.64□□□□□ -2.31
PALB2-204ENST00000566069 NBEAL1Q6ZS30 2694 aa0.64□□□□□ -2.31
PALB2-204ENST00000566069 VPS13CQ709C8 3753 aa0.64□□□□□ -2.31
PALB2-204ENST00000566069 MYO18BQ8IUG5 2567 aa0.63□□□□□ -2.31
PALB2-204ENST00000566069 USP34Q70CQ2 3546 aa0.63□□□□□ -2.31
PALB2-204ENST00000566069 DNAH5Q8TE73 4624 aa0.63□□□□□ -2.31
PALB2-204ENST00000566069 CENPFP49454 3210 aa0.63□□□□□ -2.31
PALB2-204ENST00000566069 TEP1Q99973 2627 aaKnown RBP0.63□□□□□ -2.31
PALB2-204ENST00000566069 MUC3AQ02505 3323 aa0.63□□□□□ -2.31
PALB2-204ENST00000566069 TNXBP22105 4242 aa0.62□□□□□ -2.31
PALB2-204ENST00000566069 PLECQ15149 4684 aaKnown RBP0.62□□□□□ -2.31
PALB2-204ENST00000566069 XIRP2A4UGR9 3374 aa0.62□□□□□ -2.31
PALB2-204ENST00000566069 VCANP13611 3396 aa0.62□□□□□ -2.31
PALB2-204ENST00000566069 LRP1Q07954 4544 aaKnown RBP0.62□□□□□ -2.31
PALB2-204ENST00000566069 FLNAP21333 2647 aaKnown RBP0.62□□□□□ -2.31
PALB2-204ENST00000566069 PKHD1P08F94 4074 aa0.62□□□□□ -2.31
PALB2-204ENST00000566069 FAT1Q14517 4588 aa0.61□□□□□ -2.31
PALB2-204ENST00000566069 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
PALB2-204ENST00000566069 LAMA3Q16787 3333 aa0.61□□□□□ -2.31
PALB2-204ENST00000566069 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
PALB2-204ENST00000566069 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
PALB2-204ENST00000566069 FASNP49327 2511 aaKnown RBP0.6□□□□□ -2.31
PALB2-204ENST00000566069 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
PALB2-204ENST00000566069 TLN1Q9Y490 2541 aaKnown RBP0.59□□□□□ -2.32
PALB2-204ENST00000566069 DYNC1H1Q14204 4646 aaKnown RBP0.58□□□□□ -2.32
PALB2-204ENST00000566069 STAB2Q8WWQ8 2551 aa0.58□□□□□ -2.32
PALB2-204ENST00000566069 DNAH14Q0VDD8 3507 aa0.58□□□□□ -2.32
PALB2-204ENST00000566069 BRCA2P51587 3418 aa0.58□□□□□ -2.32
PALB2-204ENST00000566069 MAST4O15021 2626 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms