RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 DMXL1Q9Y485 3027 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 PRM1P04553 51 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 LINC01556Q5JQF7 62 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 NCOR2Q9Y618 2525 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 DNAH1Q9P2D7 4330 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 FRAS1Q86XX4 4008 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 PTPN13Q12923 2485 aa0.88□□□□□ -2.27
CCNDBP1-207ENST00000565958 LAMA5O15230 3695 aa0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 HUWE1Q7Z6Z7 4374 aaKnown RBP0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 DNAH12Q6ZR08 3092 aa0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 DEFB133Q30KQ1 61 aa0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 DNAH9Q9NYC9 4486 aa0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 CUBNO60494 3623 aa0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 SETXQ7Z333 2677 aaKnown RBP0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 NIPBLQ6KC79 2804 aaeCLIP0.87□□□□□ -2.27
CCNDBP1-207ENST00000565958 SPTBN5Q9NRC6 3674 aaKnown RBP0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 NBEAL2Q6ZNJ1 2754 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 DNAH5Q8TE73 4624 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 STAB1Q9NY15 2570 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 HIVEP1P15822 2718 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 Q9Y3F1 56 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 DMXL2Q8TDJ6 3036 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 FAM186AA6NE01 2351 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 CSMD1Q96PZ7 3565 aa0.86□□□□□ -2.27
CCNDBP1-207ENST00000565958 PKD1L1Q8TDX9 2849 aa0.85□□□□□ -2.27
CCNDBP1-207ENST00000565958 KRTAP8-1Q8IUC2 63 aa0.85□□□□□ -2.27
CCNDBP1-207ENST00000565958 U3KQA8 63 aa0.85□□□□□ -2.27
CCNDBP1-207ENST00000565958 DNAH17Q9UFH2 4485 aa0.85□□□□□ -2.27
CCNDBP1-207ENST00000565958 MXRA5Q9NR99 2828 aa0.85□□□□□ -2.27
CCNDBP1-207ENST00000565958 ZANQ9Y493 2812 aa0.84□□□□□ -2.27
CCNDBP1-207ENST00000565958 NSD1Q96L73 2696 aaPredicted RBP0.84□□□□□ -2.27
CCNDBP1-207ENST00000565958 MTORP42345 2549 aa0.84□□□□□ -2.28
CCNDBP1-207ENST00000565958 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.28
CCNDBP1-207ENST00000565958 KALRNO60229 2985 aa0.84□□□□□ -2.28
CCNDBP1-207ENST00000565958 SPG11Q96JI7 2443 aa0.83□□□□□ -2.28
CCNDBP1-207ENST00000565958 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
CCNDBP1-207ENST00000565958 USP9XQ93008 2570 aaPredicted RBP0.82□□□□□ -2.28
CCNDBP1-207ENST00000565958 LRP1Q07954 4544 aaKnown RBP0.82□□□□□ -2.28
CCNDBP1-207ENST00000565958 CMYA5Q8N3K9 4069 aa0.82□□□□□ -2.28
CCNDBP1-207ENST00000565958 SONP18583 2426 aaKnown RBP0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 PKHD1P08F94 4074 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 HTN3P15516 51 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 ACANP16112 2415 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 CFAP46Q8IYW2 2715 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 CFAP47Q6ZTR5 3102 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 DYNC1H1Q14204 4646 aaKnown RBP0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 SVEP1Q4LDE5 3571 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 MUC3AQ02505 3323 aa0.81□□□□□ -2.28
CCNDBP1-207ENST00000565958 ACACBO00763 2458 aa0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 LPAP08519 4548 aa0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 ANKHD1Q8IWZ3 2542 aaKnown RBP0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 CD52P31358 61 aa0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 TRRAPQ9Y4A5 3859 aa0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 FREM2Q5SZK8 3169 aa0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 TEP1Q99973 2627 aaKnown RBP0.8□□□□□ -2.28
CCNDBP1-207ENST00000565958 TGP01266 2768 aa0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 FAT1Q14517 4588 aa0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 WDFY4Q6ZS81 3184 aa0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 VPS13AQ96RL7 3174 aa0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 RPS29P62273 56 aaKnown RBP0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 XIRP2A4UGR9 3374 aa0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 LAMA3Q16787 3333 aa0.79□□□□□ -2.28
CCNDBP1-207ENST00000565958 UNC79Q9P2D8 2635 aa0.78□□□□□ -2.28
CCNDBP1-207ENST00000565958 ITPR2Q14571 2701 aa0.78□□□□□ -2.28
CCNDBP1-207ENST00000565958 SRCAPQ6ZRS2 3230 aa0.78□□□□□ -2.28
CCNDBP1-207ENST00000565958 CSMD2Q7Z408 3487 aa0.77□□□□□ -2.29
CCNDBP1-207ENST00000565958 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
CCNDBP1-207ENST00000565958 SMR3BP02814 79 aaPredicted RBP0.77□□□□□ -2.29
CCNDBP1-207ENST00000565958 FLNBO75369 2602 aaKnown RBP0.77□□□□□ -2.29
CCNDBP1-207ENST00000565958 HRNRQ86YZ3 2850 aaPredicted RBP0.77□□□□□ -2.29
CCNDBP1-207ENST00000565958 SPEGQ15772 3267 aa0.77□□□□□ -2.29
CCNDBP1-207ENST00000565958 UTRNP46939 3433 aa0.76□□□□□ -2.29
CCNDBP1-207ENST00000565958 ZFYVE26Q68DK2 2539 aa0.76□□□□□ -2.29
CCNDBP1-207ENST00000565958 TLN2Q9Y4G6 2542 aa0.76□□□□□ -2.29
CCNDBP1-207ENST00000565958 SYNE1Q8NF91 8797 aaKnown RBP0.76□□□□□ -2.29
CCNDBP1-207ENST00000565958 FLNAP21333 2647 aaKnown RBP0.75□□□□□ -2.29
CCNDBP1-207ENST00000565958 ADGRG4Q8IZF6 3080 aa0.75□□□□□ -2.29
CCNDBP1-207ENST00000565958 DEFB4AO15263 64 aa0.75□□□□□ -2.29
CCNDBP1-207ENST00000565958 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
CCNDBP1-207ENST00000565958 GOLGB1Q14789 3259 aaKnown RBP0.74□□□□□ -2.29
CCNDBP1-207ENST00000565958 TEX15Q9BXT5 2789 aa0.74□□□□□ -2.29
CCNDBP1-207ENST00000565958 NBEAL1Q6ZS30 2694 aa0.73□□□□□ -2.29
CCNDBP1-207ENST00000565958 VPS13CQ709C8 3753 aa0.73□□□□□ -2.29
CCNDBP1-207ENST00000565958 MYO18BQ8IUG5 2567 aa0.73□□□□□ -2.29
CCNDBP1-207ENST00000565958 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
CCNDBP1-207ENST00000565958 MUC17Q685J3 4493 aa0.73□□□□□ -2.29
CCNDBP1-207ENST00000565958 CENPEQ02224 2701 aa0.73□□□□□ -2.29
CCNDBP1-207ENST00000565958 LOC400499M0QZD8 3231 aa0.72□□□□□ -2.29
CCNDBP1-207ENST00000565958 KRTAP19-5Q3LI72 72 aa0.72□□□□□ -2.29
CCNDBP1-207ENST00000565958 FASNP49327 2511 aaKnown RBP0.72□□□□□ -2.29
CCNDBP1-207ENST00000565958 HERC1Q15751 4861 aa0.72□□□□□ -2.29
CCNDBP1-207ENST00000565958 ASPMQ8IZT6 3477 aa0.72□□□□□ -2.29
CCNDBP1-207ENST00000565958 LAMA1P25391 3075 aa0.71□□□□□ -2.3
CCNDBP1-207ENST00000565958 LRP1BQ9NZR2 4599 aa0.71□□□□□ -2.3
CCNDBP1-207ENST00000565958 DOPEY1Q5JWR5 2465 aa0.71□□□□□ -2.3
CCNDBP1-207ENST00000565958 MYO15AQ9UKN7 3530 aa0.7□□□□□ -2.3
CCNDBP1-207ENST00000565958 SPRR2DP22532 72 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms