RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 KRTAP5-9P26371 169 aa10.29□□□□□ -0.76
RAB40C-209ENST00000565511 KMT2DO14686 5537 aa10.27□□□□□ -0.77
RAB40C-209ENST00000565511 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
RAB40C-209ENST00000565511 MDN1Q9NU22 5596 aa10.21□□□□□ -0.77
RAB40C-209ENST00000565511 IMUPQ9GZP8 106 aa10.19□□□□□ -0.78
RAB40C-209ENST00000565511 KRTAP20-1Q3LI63 56 aa10.18□□□□□ -0.78
RAB40C-209ENST00000565511 PCP4L1A6NKN8 68 aa10.17□□□□□ -0.78
RAB40C-209ENST00000565511 H0Y9P7 68 aa10.17□□□□□ -0.78
RAB40C-209ENST00000565511 H0YAA0 97 aa10.14□□□□□ -0.79
RAB40C-209ENST00000565511 UQCRQO14949 82 aa10.14□□□□□ -0.79
RAB40C-209ENST00000565511 NDUFC1O43677 76 aa10.13□□□□□ -0.79
RAB40C-209ENST00000565511 HIST1H4AP62805 103 aaKnown RBP10.12□□□□□ -0.79
RAB40C-209ENST00000565511 ACYP1P07311 99 aa10.1□□□□□ -0.79
RAB40C-209ENST00000565511 ATP5EP2Q5VTU8 51 aa10.1□□□□□ -0.79
RAB40C-209ENST00000565511 FAM240AA0A1B0GVK7 77 aa10.08□□□□□ -0.8
RAB40C-209ENST00000565511 ADM2Q7Z4H4 148 aa10.08□□□□□ -0.8
RAB40C-209ENST00000565511 ATOX1O00244 68 aa10.07□□□□□ -0.8
RAB40C-209ENST00000565511 MT1XP80297 61 aa10.03□□□□□ -0.8
RAB40C-209ENST00000565511 A8MUN3 132 aa10□□□□□ -0.81
RAB40C-209ENST00000565511 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
RAB40C-209ENST00000565511 SPRR2FQ96RM1 72 aa9.92□□□□□ -0.82
RAB40C-209ENST00000565511 OCR1Q9BZK8 76 aa9.9□□□□□ -0.82
RAB40C-209ENST00000565511 P0C880 135 aa9.89□□□□□ -0.83
RAB40C-209ENST00000565511 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
RAB40C-209ENST00000565511 PRO2289Q9P1D8 64 aa9.87□□□□□ -0.83
RAB40C-209ENST00000565511 SPRR2EP22531 72 aa9.84□□□□□ -0.83
RAB40C-209ENST00000565511 SPRR2BP35325 72 aa9.84□□□□□ -0.83
RAB40C-209ENST00000565511 SPRR2AP35326 72 aa9.84□□□□□ -0.83
RAB40C-209ENST00000565511 KRTAP2-3P0C7H8 128 aa9.82□□□□□ -0.84
RAB40C-209ENST00000565511 PLAC4Q8WY50 150 aa9.82□□□□□ -0.84
RAB40C-209ENST00000565511 KRTAP2-4Q9BYR9 128 aa9.82□□□□□ -0.84
RAB40C-209ENST00000565511 MP68P56378 58 aa9.79□□□□□ -0.84
RAB40C-209ENST00000565511 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
RAB40C-209ENST00000565511 R4GN34 69 aa9.78□□□□□ -0.84
RAB40C-209ENST00000565511 KRTAP8-1Q8IUC2 63 aa9.77□□□□□ -0.85
RAB40C-209ENST00000565511 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
RAB40C-209ENST00000565511 M0QZ58 72 aa9.74□□□□□ -0.85
RAB40C-209ENST00000565511 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
RAB40C-209ENST00000565511 LCE1AQ5T7P2 110 aa9.71□□□□□ -0.86
RAB40C-209ENST00000565511 KRTAP4-8A0A0G2JLE6 195 aa9.7□□□□□ -0.86
RAB40C-209ENST00000565511 KRTAP4-8Q9BYQ9 185 aa9.7□□□□□ -0.86
RAB40C-209ENST00000565511 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
RAB40C-209ENST00000565511 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
RAB40C-209ENST00000565511 A0A1B0GV90 55 aa9.62□□□□□ -0.87
RAB40C-209ENST00000565511 H3BPC8 53 aa9.62□□□□□ -0.87
RAB40C-209ENST00000565511 KRTAP10-7P60409 375 aaPredicted RBP9.58□□□□□ -0.88
RAB40C-209ENST00000565511 SPRR2DP22532 72 aa9.5□□□□□ -0.89
RAB40C-209ENST00000565511 KRTAP2-2Q9BYT5 123 aa9.49□□□□□ -0.89
RAB40C-209ENST00000565511 KRTAP2-1Q9BYU5 128 aa9.49□□□□□ -0.89
RAB40C-209ENST00000565511 KRTAP10-12P60413 245 aa9.48□□□□□ -0.89
RAB40C-209ENST00000565511 SCGB1A1P11684 91 aa9.45□□□□□ -0.9
RAB40C-209ENST00000565511 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
RAB40C-209ENST00000565511 J3QR89 54 aa9.34□□□□□ -0.91
RAB40C-209ENST00000565511 ACYP2P14621 99 aa9.33□□□□□ -0.92
RAB40C-209ENST00000565511 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
RAB40C-209ENST00000565511 LCE3BQ5TA77 95 aa9.27□□□□□ -0.93
RAB40C-209ENST00000565511 SPTSSBQ8NFR3 76 aa9.21□□□□□ -0.94
RAB40C-209ENST00000565511 KRTAP13-4Q3LI77 160 aa9.19□□□□□ -0.94
RAB40C-209ENST00000565511 CHKB-CPT1BH3BT56 60 aa9.16□□□□□ -0.94
RAB40C-209ENST00000565511 SNURFQ9Y675 71 aa9.13□□□□□ -0.95
RAB40C-209ENST00000565511 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
RAB40C-209ENST00000565511 KRTAP19-7Q3SYF9 63 aa8.98□□□□□ -0.97
RAB40C-209ENST00000565511 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.98
RAB40C-209ENST00000565511 CAMK2N1Q7Z7J9 78 aa8.94□□□□□ -0.98
RAB40C-209ENST00000565511 K7ERU9 68 aa8.9□□□□□ -0.98
RAB40C-209ENST00000565511 MT1EP04732 61 aa8.9□□□□□ -0.98
RAB40C-209ENST00000565511 LCE5AQ5TCM9 118 aa8.9□□□□□ -0.98
RAB40C-209ENST00000565511 DSTQ03001 7570 aaKnown RBP8.85□□□□□ -0.99
RAB40C-209ENST00000565511 KRTAP19-3Q7Z4W3 81 aa8.83□□□□□ -1
RAB40C-209ENST00000565511 COA5Q86WW8 74 aa8.79□□□□□ -1
RAB40C-209ENST00000565511 SERP2Q8N6R1 65 aa8.79□□□□□ -1
RAB40C-209ENST00000565511 A0A0D9SG42 100 aa8.78□□□□□ -1
RAB40C-209ENST00000565511 GPR98Q8WXG9 6306 aa8.75□□□□□ -1.01
RAB40C-209ENST00000565511 KRTAP4-9Q9BYQ8 210 aa8.75□□□□□ -1.01
RAB40C-209ENST00000565511 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
RAB40C-209ENST00000565511 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
RAB40C-209ENST00000565511 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
RAB40C-209ENST00000565511 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
RAB40C-209ENST00000565511 CYSTM1Q9H1C7 97 aa8.61□□□□□ -1.03
RAB40C-209ENST00000565511 SERP1Q9Y6X1 66 aa8.6□□□□□ -1.03
RAB40C-209ENST00000565511 SEC61GP60059 68 aa8.57□□□□□ -1.04
RAB40C-209ENST00000565511 A0A1B0GU33 70 aa8.56□□□□□ -1.04
RAB40C-209ENST00000565511 MT1GP13640 62 aa8.54□□□□□ -1.04
RAB40C-209ENST00000565511 LCE1DQ5T752 114 aa8.5□□□□□ -1.05
RAB40C-209ENST00000565511 MT1MQ8N339 61 aa8.48□□□□□ -1.05
RAB40C-209ENST00000565511 MT1LQ93083 61 aa8.46□□□□□ -1.06
RAB40C-209ENST00000565511 COX7CP15954 63 aa8.44□□□□□ -1.06
RAB40C-209ENST00000565511 H7BZZ5 65 aa8.43□□□□□ -1.06
RAB40C-209ENST00000565511 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
RAB40C-209ENST00000565511 HMCN1Q96RW7 5635 aa8.4□□□□□ -1.07
RAB40C-209ENST00000565511 A8MU10 97 aa8.38□□□□□ -1.07
RAB40C-209ENST00000565511 KRTAP4-3Q9BYR4 195 aa8.38□□□□□ -1.07
RAB40C-209ENST00000565511 MT4P47944 62 aa8.36□□□□□ -1.07
RAB40C-209ENST00000565511 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
RAB40C-209ENST00000565511 LCE4AQ5TA78 99 aa8.34□□□□□ -1.07
RAB40C-209ENST00000565511 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
RAB40C-209ENST00000565511 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.09
RAB40C-209ENST00000565511 A0A1B0GU69 56 aa8.27□□□□□ -1.09
RAB40C-209ENST00000565511 KRTAP5-4Q6L8H1 288 aa8.23□□□□□ -1.09
RAB40C-209ENST00000565511 AHNAK2Q8IVF2 5795 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms