RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SPAG11AQ6PDA7 123 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 ATOH7Q8N100 152 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 SMCO4Q9NRQ5 59 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 HSPB8Q9UJY1 196 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 C20orf202A1L168 122 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 DPM2O94777 84 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 C3orf79P0CE67 100 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 COX7BP24311 80 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 RPL37P61927 97 aaKnown RBP0.63□□□□□ -2.31
PALB2-203ENST00000565038 S100A7L2Q5SY68 101 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 SMIM11BQ8TCY0 68 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 Q96NJ1 140 aa0.63□□□□□ -2.31
PALB2-203ENST00000565038 TEX49A0A1B0GTD5 131 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 A0A1W2PPM0 123 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 ZNF815PA8K554 130 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 SYS1-DBNDD2H3BUS1 97 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 H3BUT2 72 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 IGKCP01834 107 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 AKR1D1P51857 326 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 ELOF1P60002 83 aaKnown RBP0.62□□□□□ -2.31
PALB2-203ENST00000565038 LINC00575Q6W349 94 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 COX6B2Q6YFQ2 88 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 Q6ZRX8 168 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 PRO1933Q9H354 126 aa0.62□□□□□ -2.31
PALB2-203ENST00000565038 IGLV5-48A0A075B6I7 105 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 J3KT08 172 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 KRTDAPP60985 99 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 LINC01545Q5VT33 79 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 SFTA2Q6UW10 78 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 Q6ZQY7 126 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 C14orf144Q96I85 54 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 C12orf57Q99622 126 aa0.61□□□□□ -2.31
PALB2-203ENST00000565038 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
PALB2-203ENST00000565038 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
PALB2-203ENST00000565038 TRBV7-6A0A0J9YX20 115 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 TRBV7-7A0A0K0K1E9 115 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 hADV29S1A0JD25 119 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 LINC01549A6NIU2 74 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 LINC00587B1AMM8 73 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 PLNP26678 52 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 RPS29P62273 56 aaKnown RBP0.6□□□□□ -2.31
PALB2-203ENST00000565038 RBM3P98179 157 aaKnown RBP0.6□□□□□ -2.31
PALB2-203ENST00000565038 KRTAP19-6Q3LI70 58 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 Q5XG85 94 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 ATP11AUNQ6ZP68 121 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 SVBPQ8N300 66 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 SPANXDQ9BXN6 97 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 SNHG12Q9BXW3 62 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 SPANXCQ9NY87 97 aa0.6□□□□□ -2.31
PALB2-203ENST00000565038 IFITM1P13164 125 aa0.59□□□□□ -2.31
PALB2-203ENST00000565038 CSAG1Q6PB30 78 aa0.59□□□□□ -2.31
PALB2-203ENST00000565038 LINC00472Q9H8W2 130 aa0.59□□□□□ -2.31
PALB2-203ENST00000565038 A0A087WVE0 104 aa0.58□□□□□ -2.32
PALB2-203ENST00000565038 TRAV13-2A0A0B4J235 113 aa0.58□□□□□ -2.32
PALB2-203ENST00000565038 MT1BP07438 61 aa0.58□□□□□ -2.32
PALB2-203ENST00000565038 PDE6GP18545 87 aa0.58□□□□□ -2.32
PALB2-203ENST00000565038 SPINK7P58062 85 aa0.58□□□□□ -2.32
PALB2-203ENST00000565038 S100A12P80511 92 aa0.58□□□□□ -2.32
PALB2-203ENST00000565038 UQCRQO14949 82 aa0.57□□□□□ -2.32
PALB2-203ENST00000565038 COX8AP10176 69 aa0.57□□□□□ -2.32
PALB2-203ENST00000565038 Q6JHZ5 121 aa0.57□□□□□ -2.32
PALB2-203ENST00000565038 VPS25Q9BRG1 176 aa0.57□□□□□ -2.32
PALB2-203ENST00000565038 SYNE1Q8NF91 8797 aaKnown RBP0.57□□□□□ -2.32
PALB2-203ENST00000565038 TRBV20-1A0A075B6N2 111 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 F8WEM9 126 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 H0YGX0 51 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 DLEU1O43261 78 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 CCKP06307 115 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 SCGB1A1P11684 91 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 PYY3Q5JQD4 70 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 BVES-AS1Q5T3Y7 98 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 PRO1854Q9UHT4 67 aa0.56□□□□□ -2.32
PALB2-203ENST00000565038 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
PALB2-203ENST00000565038 TRBV7-4A0A0J9YYF1 115 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 A0A1B0GX51 115 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 A6NN06 94 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 C9JAW5 83 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 RPS28P62857 69 aaKnown RBP0.55□□□□□ -2.32
PALB2-203ENST00000565038 KRTAP19-8Q3LI54 63 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 KRTAP20-1Q3LI63 56 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 H1FX-AS1Q4G0G2 97 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 WFDC13Q8IUB5 93 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 HIGD1BQ9P298 99 aa0.55□□□□□ -2.32
PALB2-203ENST00000565038 MMP24-AS1A0A0U1RRL7 71 aa0.54□□□□□ -2.32
PALB2-203ENST00000565038 LOC101927531A0A1B0GV80 90 aa0.54□□□□□ -2.32
PALB2-203ENST00000565038 NREPQ16612 68 aa0.54□□□□□ -2.32
PALB2-203ENST00000565038 PPDPFLQ8WWR9 84 aa0.54□□□□□ -2.32
PALB2-203ENST00000565038 HCG22E2RYF7 251 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 K7EQZ3 153 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 S100A1P23297 94 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 HSD52Q0P140 79 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 COPS9Q8WXC6 57 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 PLAC4Q8WY50 150 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 LINC00208Q96KT6 92 aa0.53□□□□□ -2.32
PALB2-203ENST00000565038 MRPL34Q9BQ48 92 aaKnown RBP0.53□□□□□ -2.32
PALB2-203ENST00000565038 VAMP8Q9BV40 100 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms