RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 LYSTQ99698 3801 aa3.42□□□□□ -1.86
PTPN9-204ENST00000564970 DEFB4AO15263 64 aa3.4□□□□□ -1.87
PTPN9-204ENST00000564970 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
PTPN9-204ENST00000564970 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
PTPN9-204ENST00000564970 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
PTPN9-204ENST00000564970 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
PTPN9-204ENST00000564970 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
PTPN9-204ENST00000564970 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
PTPN9-204ENST00000564970 STAB2Q8WWQ8 2551 aa3.37□□□□□ -1.87
PTPN9-204ENST00000564970 MAPK1IP1LQ8NDC0 245 aa3.36□□□□□ -1.87
PTPN9-204ENST00000564970 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
PTPN9-204ENST00000564970 DNAH3Q8TD57 4116 aa3.34□□□□□ -1.87
PTPN9-204ENST00000564970 INE1O15225 51 aa3.32□□□□□ -1.88
PTPN9-204ENST00000564970 Q8N1X5 172 aa3.32□□□□□ -1.88
PTPN9-204ENST00000564970 S4R3F8 94 aa3.32□□□□□ -1.88
PTPN9-204ENST00000564970 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
PTPN9-204ENST00000564970 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
PTPN9-204ENST00000564970 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
PTPN9-204ENST00000564970 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
PTPN9-204ENST00000564970 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
PTPN9-204ENST00000564970 UBE2DNLQ8IWF7 75 aa3.29□□□□□ -1.88
PTPN9-204ENST00000564970 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
PTPN9-204ENST00000564970 PLECQ15149 4684 aaKnown RBP3.28□□□□□ -1.88
PTPN9-204ENST00000564970 DNAH10Q8IVF4 4471 aa3.28□□□□□ -1.88
PTPN9-204ENST00000564970 RPS29P62273 56 aaKnown RBP3.27□□□□□ -1.89
PTPN9-204ENST00000564970 APLNQ9ULZ1 77 aa3.25□□□□□ -1.89
PTPN9-204ENST00000564970 STARD9Q9P2P6 4700 aa3.25□□□□□ -1.89
PTPN9-204ENST00000564970 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
PTPN9-204ENST00000564970 M0QZ58 72 aa3.23□□□□□ -1.89
PTPN9-204ENST00000564970 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
PTPN9-204ENST00000564970 DYNC1H1Q14204 4646 aaKnown RBP3.21□□□□□ -1.89
PTPN9-204ENST00000564970 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
PTPN9-204ENST00000564970 HUWE1Q7Z6Z7 4374 aaKnown RBP3.2□□□□□ -1.9
PTPN9-204ENST00000564970 A0A0D9SG42 100 aa3.19□□□□□ -1.9
PTPN9-204ENST00000564970 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
PTPN9-204ENST00000564970 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
PTPN9-204ENST00000564970 DNAH11Q96DT5 4516 aa3.19□□□□□ -1.9
PTPN9-204ENST00000564970 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
PTPN9-204ENST00000564970 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
PTPN9-204ENST00000564970 KRTAP9-3Q9BYQ3 159 aa3.18□□□□□ -1.9
PTPN9-204ENST00000564970 R4GN34 69 aa3.18□□□□□ -1.9
PTPN9-204ENST00000564970 HSPG2P98160 4391 aa3.18□□□□□ -1.9
PTPN9-204ENST00000564970 DMBT1Q9UGM3 2413 aaPredicted RBP3.17□□□□□ -1.9
PTPN9-204ENST00000564970 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
PTPN9-204ENST00000564970 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
PTPN9-204ENST00000564970 MUC2Q02817 5179 aa3.16□□□□□ -1.9
PTPN9-204ENST00000564970 PKHD1P08F94 4074 aa3.15□□□□□ -1.9
PTPN9-204ENST00000564970 RNF213Q63HN8 5207 aa3.15□□□□□ -1.91
PTPN9-204ENST00000564970 FAT2Q9NYQ8 4349 aa3.14□□□□□ -1.91
PTPN9-204ENST00000564970 KRTAP10-3P60369 221 aa3.14□□□□□ -1.91
PTPN9-204ENST00000564970 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
PTPN9-204ENST00000564970 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
PTPN9-204ENST00000564970 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
PTPN9-204ENST00000564970 VPS13DQ5THJ4 4388 aa3.11□□□□□ -1.91
PTPN9-204ENST00000564970 DNAH2Q9P225 4427 aa3.1□□□□□ -1.91
PTPN9-204ENST00000564970 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
PTPN9-204ENST00000564970 APOBP04114 4563 aaKnown RBP3.09□□□□□ -1.92
PTPN9-204ENST00000564970 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
PTPN9-204ENST00000564970 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
PTPN9-204ENST00000564970 PKD1P98161 4303 aa3.07□□□□□ -1.92
PTPN9-204ENST00000564970 DNAH17Q9UFH2 4485 aa3.07□□□□□ -1.92
PTPN9-204ENST00000564970 Q5VSD8 79 aa3.05□□□□□ -1.92
PTPN9-204ENST00000564970 KRTAP10-11P60412 298 aa3.01□□□□□ -1.93
PTPN9-204ENST00000564970 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
PTPN9-204ENST00000564970 FAT1Q14517 4588 aa2.99□□□□□ -1.93
PTPN9-204ENST00000564970 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
PTPN9-204ENST00000564970 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
PTPN9-204ENST00000564970 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
PTPN9-204ENST00000564970 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
PTPN9-204ENST00000564970 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
PTPN9-204ENST00000564970 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PTPN9-204ENST00000564970 DNAH5Q8TE73 4624 aa2.96□□□□□ -1.94
PTPN9-204ENST00000564970 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
PTPN9-204ENST00000564970 LRP2P98164 4655 aa2.92□□□□□ -1.94
PTPN9-204ENST00000564970 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
PTPN9-204ENST00000564970 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
PTPN9-204ENST00000564970 TNP1P09430 55 aa2.87□□□□□ -1.95
PTPN9-204ENST00000564970 C9orf92A6NGG3 77 aa2.86□□□□□ -1.95
PTPN9-204ENST00000564970 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.95
PTPN9-204ENST00000564970 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
PTPN9-204ENST00000564970 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
PTPN9-204ENST00000564970 TNXBP22105 4242 aa2.74□□□□□ -1.97
PTPN9-204ENST00000564970 KRTAP10-2P60368 255 aa2.74□□□□□ -1.97
PTPN9-204ENST00000564970 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
PTPN9-204ENST00000564970 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
PTPN9-204ENST00000564970 KRTAP10-1P60331 282 aa2.67□□□□□ -1.98
PTPN9-204ENST00000564970 LPAP08519 4548 aa2.63□□□□□ -1.99
PTPN9-204ENST00000564970 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
PTPN9-204ENST00000564970 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
PTPN9-204ENST00000564970 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
PTPN9-204ENST00000564970 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
PTPN9-204ENST00000564970 NEBP20929 6669 aa2.57□□□□□ -2
PTPN9-204ENST00000564970 SMR3BP02814 79 aaPredicted RBP2.56□□□□□ -2
PTPN9-204ENST00000564970 MT1HL1P0DM35 61 aa2.55□□□□□ -2
PTPN9-204ENST00000564970 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
PTPN9-204ENST00000564970 USH2AO75445 5202 aa2.53□□□□□ -2
PTPN9-204ENST00000564970 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
PTPN9-204ENST00000564970 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
PTPN9-204ENST00000564970 KRTAP10-4P60372 401 aaPredicted RBP2.51□□□□□ -2.01
PTPN9-204ENST00000564970 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms