RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.6
TCF4-224ENST00000564403 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.6
TCF4-224ENST00000564403 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
TCF4-224ENST00000564403 A0A1B0GU33 70 aa5.06□□□□□ -1.6
TCF4-224ENST00000564403 KRTAP10-4P60372 401 aaPredicted RBP5.06□□□□□ -1.6
TCF4-224ENST00000564403 HSPG2P98160 4391 aa5.06□□□□□ -1.6
TCF4-224ENST00000564403 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
TCF4-224ENST00000564403 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
TCF4-224ENST00000564403 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
TCF4-224ENST00000564403 RYR1P21817 5038 aa5.03□□□□□ -1.6
TCF4-224ENST00000564403 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
TCF4-224ENST00000564403 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
TCF4-224ENST00000564403 Q8N1X5 172 aa5.01□□□□□ -1.61
TCF4-224ENST00000564403 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
TCF4-224ENST00000564403 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
TCF4-224ENST00000564403 SPINK1P00995 79 aa5□□□□□ -1.61
TCF4-224ENST00000564403 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
TCF4-224ENST00000564403 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
TCF4-224ENST00000564403 TNXBP22105 4242 aa4.96□□□□□ -1.61
TCF4-224ENST00000564403 C9orf92A6NGG3 77 aa4.96□□□□□ -1.62
TCF4-224ENST00000564403 H0YAA0 97 aa4.95□□□□□ -1.62
TCF4-224ENST00000564403 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
TCF4-224ENST00000564403 Q5VSD8 79 aa4.92□□□□□ -1.62
TCF4-224ENST00000564403 IGKV2D-30A0A075B6S6 120 aa4.91□□□□□ -1.62
TCF4-224ENST00000564403 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
TCF4-224ENST00000564403 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
TCF4-224ENST00000564403 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
TCF4-224ENST00000564403 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
TCF4-224ENST00000564403 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
TCF4-224ENST00000564403 R4GN34 69 aa4.84□□□□□ -1.63
TCF4-224ENST00000564403 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
TCF4-224ENST00000564403 LPAP08519 4548 aa4.8□□□□□ -1.64
TCF4-224ENST00000564403 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
TCF4-224ENST00000564403 LRP2P98164 4655 aa4.78□□□□□ -1.64
TCF4-224ENST00000564403 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
TCF4-224ENST00000564403 HERC2O95714 4834 aa4.73□□□□□ -1.65
TCF4-224ENST00000564403 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.65
TCF4-224ENST00000564403 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
TCF4-224ENST00000564403 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
TCF4-224ENST00000564403 XP32Q5T750 250 aa4.69□□□□□ -1.66
TCF4-224ENST00000564403 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
TCF4-224ENST00000564403 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
TCF4-224ENST00000564403 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
TCF4-224ENST00000564403 MUC2Q02817 5179 aa4.61□□□□□ -1.67
TCF4-224ENST00000564403 COX6B2Q6YFQ2 88 aa4.59□□□□□ -1.68
TCF4-224ENST00000564403 HERC1Q15751 4861 aa4.58□□□□□ -1.68
TCF4-224ENST00000564403 INE1O15225 51 aa4.51□□□□□ -1.69
TCF4-224ENST00000564403 MUC17Q685J3 4493 aa4.46□□□□□ -1.7
TCF4-224ENST00000564403 S4R3F8 94 aa4.44□□□□□ -1.7
TCF4-224ENST00000564403 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
TCF4-224ENST00000564403 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
TCF4-224ENST00000564403 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.7
TCF4-224ENST00000564403 RNF213Q63HN8 5207 aa4.4□□□□□ -1.71
TCF4-224ENST00000564403 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
TCF4-224ENST00000564403 A0A0D9SG42 100 aa4.37□□□□□ -1.71
TCF4-224ENST00000564403 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
TCF4-224ENST00000564403 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
TCF4-224ENST00000564403 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
TCF4-224ENST00000564403 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.73
TCF4-224ENST00000564403 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
TCF4-224ENST00000564403 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
TCF4-224ENST00000564403 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
TCF4-224ENST00000564403 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
TCF4-224ENST00000564403 M0QZ58 72 aa4.16□□□□□ -1.74
TCF4-224ENST00000564403 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
TCF4-224ENST00000564403 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
TCF4-224ENST00000564403 M0R2T5 61 aa4.03□□□□□ -1.76
TCF4-224ENST00000564403 MT1HP80294 61 aa4.01□□□□□ -1.77
TCF4-224ENST00000564403 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
TCF4-224ENST00000564403 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
TCF4-224ENST00000564403 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
TCF4-224ENST00000564403 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
TCF4-224ENST00000564403 MT1FP04733 61 aa3.91□□□□□ -1.78
TCF4-224ENST00000564403 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
TCF4-224ENST00000564403 MT2AP02795 61 aa3.89□□□□□ -1.79
TCF4-224ENST00000564403 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
TCF4-224ENST00000564403 KRTAP10-10P60014 251 aa3.89□□□□□ -1.79
TCF4-224ENST00000564403 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
TCF4-224ENST00000564403 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
TCF4-224ENST00000564403 USH2AO75445 5202 aa3.87□□□□□ -1.79
TCF4-224ENST00000564403 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
TCF4-224ENST00000564403 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
TCF4-224ENST00000564403 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
TCF4-224ENST00000564403 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
TCF4-224ENST00000564403 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
TCF4-224ENST00000564403 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
TCF4-224ENST00000564403 MT1BP07438 61 aa3.71□□□□□ -1.82
TCF4-224ENST00000564403 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
TCF4-224ENST00000564403 TNP1P09430 55 aa3.7□□□□□ -1.82
TCF4-224ENST00000564403 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
TCF4-224ENST00000564403 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
TCF4-224ENST00000564403 KMT2DO14686 5537 aa3.67□□□□□ -1.82
TCF4-224ENST00000564403 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
TCF4-224ENST00000564403 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
TCF4-224ENST00000564403 MT1XP80297 61 aa3.64□□□□□ -1.83
TCF4-224ENST00000564403 KRTAP4-8A0A0G2JLE6 195 aa3.62□□□□□ -1.83
TCF4-224ENST00000564403 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
TCF4-224ENST00000564403 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
TCF4-224ENST00000564403 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
TCF4-224ENST00000564403 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms