RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 FCGBPQ9Y6R7 5405 aaPredicted RBP9.06□□□□□ -0.96
CMTM3-207ENST00000564060 KRTAP9-7A8MTY7 169 aa9.01□□□□□ -0.97
CMTM3-207ENST00000564060 NDUFC1O43677 76 aa9.01□□□□□ -0.97
CMTM3-207ENST00000564060 KLKP1Q107X0 134 aa9.01□□□□□ -0.97
CMTM3-207ENST00000564060 H3BPC8 53 aa9□□□□□ -0.97
CMTM3-207ENST00000564060 SCGB1A1P11684 91 aa8.99□□□□□ -0.97
CMTM3-207ENST00000564060 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
CMTM3-207ENST00000564060 SPRR2GQ9BYE4 73 aa8.97□□□□□ -0.97
CMTM3-207ENST00000564060 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
CMTM3-207ENST00000564060 Q5VV11 94 aa8.93□□□□□ -0.98
CMTM3-207ENST00000564060 H0YAA0 97 aa8.91□□□□□ -0.98
CMTM3-207ENST00000564060 K7ERU9 68 aa8.9□□□□□ -0.98
CMTM3-207ENST00000564060 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
CMTM3-207ENST00000564060 MT1BP07438 61 aa8.85□□□□□ -0.99
CMTM3-207ENST00000564060 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
CMTM3-207ENST00000564060 DMAC1Q96GE9 116 aa8.8□□□□□ -1
CMTM3-207ENST00000564060 MT-ATP8P03928 68 aa8.79□□□□□ -1
CMTM3-207ENST00000564060 A6NN06 94 aa8.78□□□□□ -1
CMTM3-207ENST00000564060 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
CMTM3-207ENST00000564060 MACF1Q9UPN3 7388 aaKnown RBP8.77□□□□□ -1.01
CMTM3-207ENST00000564060 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
CMTM3-207ENST00000564060 C20orf197Q8N268 126 aa8.69□□□□□ -1.02
CMTM3-207ENST00000564060 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
CMTM3-207ENST00000564060 ACYP2P14621 99 aa8.64□□□□□ -1.03
CMTM3-207ENST00000564060 SYNE2Q8WXH0 6885 aaKnown RBP8.62□□□□□ -1.03
CMTM3-207ENST00000564060 KRTAP6-3Q3LI67 103 aa8.6□□□□□ -1.03
CMTM3-207ENST00000564060 R4GN34 69 aa8.59□□□□□ -1.03
CMTM3-207ENST00000564060 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
CMTM3-207ENST00000564060 P0C880 135 aa8.54□□□□□ -1.04
CMTM3-207ENST00000564060 SNURFQ9Y675 71 aa8.51□□□□□ -1.05
CMTM3-207ENST00000564060 M0QZ58 72 aa8.5□□□□□ -1.05
CMTM3-207ENST00000564060 CHKB-CPT1BH3BT56 60 aa8.49□□□□□ -1.05
CMTM3-207ENST00000564060 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
CMTM3-207ENST00000564060 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
CMTM3-207ENST00000564060 PRO2289Q9P1D8 64 aa8.47□□□□□ -1.05
CMTM3-207ENST00000564060 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
CMTM3-207ENST00000564060 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
CMTM3-207ENST00000564060 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
CMTM3-207ENST00000564060 MT1XP80297 61 aa8.32□□□□□ -1.08
CMTM3-207ENST00000564060 KRTAP5-9P26371 169 aa8.25□□□□□ -1.09
CMTM3-207ENST00000564060 COX7CP15954 63 aa8.24□□□□□ -1.09
CMTM3-207ENST00000564060 COA5Q86WW8 74 aa8.18□□□□□ -1.1
CMTM3-207ENST00000564060 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
CMTM3-207ENST00000564060 MUC12Q9UKN1 5478 aa8.14□□□□□ -1.11
CMTM3-207ENST00000564060 SEC61GP60059 68 aa8.08□□□□□ -1.12
CMTM3-207ENST00000564060 NEBP20929 6669 aa8.08□□□□□ -1.12
CMTM3-207ENST00000564060 H7BZZ5 65 aa8.07□□□□□ -1.12
CMTM3-207ENST00000564060 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
CMTM3-207ENST00000564060 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
CMTM3-207ENST00000564060 SPRR2FQ96RM1 72 aa8.04□□□□□ -1.12
CMTM3-207ENST00000564060 KMT2DO14686 5537 aa8.03□□□□□ -1.12
CMTM3-207ENST00000564060 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
CMTM3-207ENST00000564060 ANAPC13Q9BS18 74 aa8□□□□□ -1.13
CMTM3-207ENST00000564060 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
CMTM3-207ENST00000564060 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
CMTM3-207ENST00000564060 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
CMTM3-207ENST00000564060 KRTAP20-1Q3LI63 56 aa7.93□□□□□ -1.14
CMTM3-207ENST00000564060 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
CMTM3-207ENST00000564060 KRTAP4-8A0A0G2JLE6 195 aa7.9□□□□□ -1.14
CMTM3-207ENST00000564060 KRTAP4-8Q9BYQ9 185 aa7.9□□□□□ -1.14
CMTM3-207ENST00000564060 MDN1Q9NU22 5596 aa7.89□□□□□ -1.15
CMTM3-207ENST00000564060 SPRR2EP22531 72 aa7.89□□□□□ -1.15
CMTM3-207ENST00000564060 SPRR2BP35325 72 aa7.89□□□□□ -1.15
CMTM3-207ENST00000564060 SPRR2AP35326 72 aa7.89□□□□□ -1.15
CMTM3-207ENST00000564060 A0A1B0GU33 70 aa7.87□□□□□ -1.15
CMTM3-207ENST00000564060 A0A0D9SG42 100 aa7.81□□□□□ -1.16
CMTM3-207ENST00000564060 A0A1B0GU69 56 aa7.8□□□□□ -1.16
CMTM3-207ENST00000564060 SPATA8Q6RVD6 105 aa7.8□□□□□ -1.16
CMTM3-207ENST00000564060 ATP5EP56381 51 aaPredicted RBP7.79□□□□□ -1.16
CMTM3-207ENST00000564060 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
CMTM3-207ENST00000564060 LCE1AQ5T7P2 110 aa7.77□□□□□ -1.17
CMTM3-207ENST00000564060 KRTAP2-3P0C7H8 128 aa7.75□□□□□ -1.17
CMTM3-207ENST00000564060 KRTAP2-4Q9BYR9 128 aa7.75□□□□□ -1.17
CMTM3-207ENST00000564060 PCP4P48539 62 aa7.73□□□□□ -1.17
CMTM3-207ENST00000564060 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
CMTM3-207ENST00000564060 SMIM26A0A096LP01 95 aa7.69□□□□□ -1.18
CMTM3-207ENST00000564060 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
CMTM3-207ENST00000564060 SPRR2DP22532 72 aa7.64□□□□□ -1.19
CMTM3-207ENST00000564060 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
CMTM3-207ENST00000564060 TMEM258P61165 79 aa7.58□□□□□ -1.2
CMTM3-207ENST00000564060 A8MU10 97 aa7.52□□□□□ -1.21
CMTM3-207ENST00000564060 KRTAP2-2Q9BYT5 123 aa7.51□□□□□ -1.21
CMTM3-207ENST00000564060 KRTAP2-1Q9BYU5 128 aa7.51□□□□□ -1.21
CMTM3-207ENST00000564060 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
CMTM3-207ENST00000564060 KRTAP19-7Q3SYF9 63 aa7.43□□□□□ -1.22
CMTM3-207ENST00000564060 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
CMTM3-207ENST00000564060 MT1EP04732 61 aa7.38□□□□□ -1.23
CMTM3-207ENST00000564060 UQCR11O14957 56 aa7.36□□□□□ -1.23
CMTM3-207ENST00000564060 TNP1P09430 55 aa7.34□□□□□ -1.23
CMTM3-207ENST00000564060 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
CMTM3-207ENST00000564060 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
CMTM3-207ENST00000564060 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
CMTM3-207ENST00000564060 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
CMTM3-207ENST00000564060 V9GYY9 64 aa7.2□□□□□ -1.26
CMTM3-207ENST00000564060 MT1GP13640 62 aa7.18□□□□□ -1.26
CMTM3-207ENST00000564060 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
CMTM3-207ENST00000564060 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
CMTM3-207ENST00000564060 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
CMTM3-207ENST00000564060 K7ERS5 55 aa7.1□□□□□ -1.27
CMTM3-207ENST00000564060 Q1T7F1 81 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms