RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ACYP1P07311 99 aa7.88□□□□□ -1.15
NME3-205ENST00000563854 ATP5EP2Q5VTU8 51 aa7.86□□□□□ -1.15
NME3-205ENST00000563854 FAM240AA0A1B0GVK7 77 aa7.85□□□□□ -1.15
NME3-205ENST00000563854 H0Y9P7 68 aa7.84□□□□□ -1.15
NME3-205ENST00000563854 J3QR89 54 aa7.82□□□□□ -1.16
NME3-205ENST00000563854 UQCRQO14949 82 aa7.82□□□□□ -1.16
NME3-205ENST00000563854 ATOX1O00244 68 aa7.79□□□□□ -1.16
NME3-205ENST00000563854 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
NME3-205ENST00000563854 NDUFC1O43677 76 aa7.77□□□□□ -1.17
NME3-205ENST00000563854 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
NME3-205ENST00000563854 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
NME3-205ENST00000563854 NEBP20929 6669 aa7.75□□□□□ -1.17
NME3-205ENST00000563854 K7ERU9 68 aa7.74□□□□□ -1.17
NME3-205ENST00000563854 MUC12Q9UKN1 5478 aa7.72□□□□□ -1.17
NME3-205ENST00000563854 LINC00643Q86TS7 51 aa7.7□□□□□ -1.18
NME3-205ENST00000563854 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
NME3-205ENST00000563854 A8MUN3 132 aa7.67□□□□□ -1.18
NME3-205ENST00000563854 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
NME3-205ENST00000563854 H0YAA0 97 aa7.66□□□□□ -1.18
NME3-205ENST00000563854 MP68P56378 58 aa7.63□□□□□ -1.19
NME3-205ENST00000563854 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
NME3-205ENST00000563854 KRTAP20-1Q3LI63 56 aa7.55□□□□□ -1.2
NME3-205ENST00000563854 MT-ATP8P03928 68 aa7.51□□□□□ -1.21
NME3-205ENST00000563854 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
NME3-205ENST00000563854 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
NME3-205ENST00000563854 R4GN34 69 aa7.48□□□□□ -1.21
NME3-205ENST00000563854 KMT2DO14686 5537 aa7.47□□□□□ -1.21
NME3-205ENST00000563854 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
NME3-205ENST00000563854 H3BPC8 53 aa7.46□□□□□ -1.22
NME3-205ENST00000563854 SCGB1A1P11684 91 aa7.46□□□□□ -1.22
NME3-205ENST00000563854 MDN1Q9NU22 5596 aa7.46□□□□□ -1.22
NME3-205ENST00000563854 P0C880 135 aa7.45□□□□□ -1.22
NME3-205ENST00000563854 C20orf197Q8N268 126 aa7.44□□□□□ -1.22
NME3-205ENST00000563854 M0QZ58 72 aa7.43□□□□□ -1.22
NME3-205ENST00000563854 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
NME3-205ENST00000563854 MT1XP80297 61 aa7.42□□□□□ -1.22
NME3-205ENST00000563854 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
NME3-205ENST00000563854 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
NME3-205ENST00000563854 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
NME3-205ENST00000563854 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
NME3-205ENST00000563854 SPRR2EP22531 72 aa7.28□□□□□ -1.24
NME3-205ENST00000563854 SPRR2BP35325 72 aa7.28□□□□□ -1.24
NME3-205ENST00000563854 SPRR2AP35326 72 aa7.28□□□□□ -1.24
NME3-205ENST00000563854 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
NME3-205ENST00000563854 KRTAP2-3P0C7H8 128 aa7.27□□□□□ -1.25
NME3-205ENST00000563854 KRTAP2-4Q9BYR9 128 aa7.27□□□□□ -1.25
NME3-205ENST00000563854 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
NME3-205ENST00000563854 ACYP2P14621 99 aa7.24□□□□□ -1.25
NME3-205ENST00000563854 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
NME3-205ENST00000563854 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
NME3-205ENST00000563854 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
NME3-205ENST00000563854 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
NME3-205ENST00000563854 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
NME3-205ENST00000563854 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
NME3-205ENST00000563854 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
NME3-205ENST00000563854 LCE1AQ5T7P2 110 aa7.11□□□□□ -1.27
NME3-205ENST00000563854 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
NME3-205ENST00000563854 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
NME3-205ENST00000563854 COX7CP15954 63 aa7.05□□□□□ -1.28
NME3-205ENST00000563854 SPRR2DP22532 72 aa7.04□□□□□ -1.28
NME3-205ENST00000563854 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
NME3-205ENST00000563854 KRTAP2-2Q9BYT5 123 aa7.02□□□□□ -1.29
NME3-205ENST00000563854 KRTAP2-1Q9BYU5 128 aa7.02□□□□□ -1.29
NME3-205ENST00000563854 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
NME3-205ENST00000563854 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
NME3-205ENST00000563854 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
NME3-205ENST00000563854 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
NME3-205ENST00000563854 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
NME3-205ENST00000563854 H7BZZ5 65 aa6.84□□□□□ -1.31
NME3-205ENST00000563854 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
NME3-205ENST00000563854 COA5Q86WW8 74 aa6.82□□□□□ -1.32
NME3-205ENST00000563854 A0A0D9SG42 100 aa6.77□□□□□ -1.33
NME3-205ENST00000563854 SEC61GP60059 68 aa6.76□□□□□ -1.33
NME3-205ENST00000563854 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
NME3-205ENST00000563854 PCP4P48539 62 aa6.71□□□□□ -1.34
NME3-205ENST00000563854 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
NME3-205ENST00000563854 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
NME3-205ENST00000563854 TMEM258P61165 79 aa6.67□□□□□ -1.34
NME3-205ENST00000563854 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
NME3-205ENST00000563854 A0A1B0GU33 70 aa6.63□□□□□ -1.35
NME3-205ENST00000563854 KRTAP19-7Q3SYF9 63 aa6.63□□□□□ -1.35
NME3-205ENST00000563854 MT1EP04732 61 aa6.59□□□□□ -1.35
NME3-205ENST00000563854 LCE5AQ5TCM9 118 aa6.56□□□□□ -1.36
NME3-205ENST00000563854 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
NME3-205ENST00000563854 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
NME3-205ENST00000563854 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
NME3-205ENST00000563854 A0A1B0GU69 56 aa6.49□□□□□ -1.37
NME3-205ENST00000563854 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
NME3-205ENST00000563854 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
NME3-205ENST00000563854 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
NME3-205ENST00000563854 A8MU10 97 aa6.43□□□□□ -1.38
NME3-205ENST00000563854 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
NME3-205ENST00000563854 MT1GP13640 62 aa6.36□□□□□ -1.39
NME3-205ENST00000563854 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
NME3-205ENST00000563854 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
NME3-205ENST00000563854 MT1MQ8N339 61 aa6.29□□□□□ -1.4
NME3-205ENST00000563854 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
NME3-205ENST00000563854 TNP1P09430 55 aa6.28□□□□□ -1.4
NME3-205ENST00000563854 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
NME3-205ENST00000563854 MT1LQ93083 61 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms