RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ACYP2P14621 99 aa5.07□□□□□ -1.6
LINC00838-201ENST00000562956 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
LINC00838-201ENST00000562956 XP32Q5T750 250 aa5.01□□□□□ -1.61
LINC00838-201ENST00000562956 DMAC1Q96GE9 116 aa5.01□□□□□ -1.61
LINC00838-201ENST00000562956 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
LINC00838-201ENST00000562956 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
LINC00838-201ENST00000562956 UQCR11O14957 56 aa5□□□□□ -1.61
LINC00838-201ENST00000562956 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
LINC00838-201ENST00000562956 BIRC6Q9NR09 4857 aa4.98□□□□□ -1.61
LINC00838-201ENST00000562956 HERC2O95714 4834 aa4.96□□□□□ -1.61
LINC00838-201ENST00000562956 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
LINC00838-201ENST00000562956 J3QL48 77 aa4.93□□□□□ -1.62
LINC00838-201ENST00000562956 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
LINC00838-201ENST00000562956 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
LINC00838-201ENST00000562956 LPAP08519 4548 aa4.91□□□□□ -1.62
LINC00838-201ENST00000562956 LRP2P98164 4655 aa4.87□□□□□ -1.63
LINC00838-201ENST00000562956 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
LINC00838-201ENST00000562956 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
LINC00838-201ENST00000562956 H0YAA0 97 aa4.81□□□□□ -1.64
LINC00838-201ENST00000562956 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
LINC00838-201ENST00000562956 ROMO1P60602 79 aa4.8□□□□□ -1.64
LINC00838-201ENST00000562956 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
LINC00838-201ENST00000562956 HERC1Q15751 4861 aa4.73□□□□□ -1.65
LINC00838-201ENST00000562956 A0A1B0GU33 70 aa4.73□□□□□ -1.65
LINC00838-201ENST00000562956 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
LINC00838-201ENST00000562956 P0C880 135 aa4.72□□□□□ -1.65
LINC00838-201ENST00000562956 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
LINC00838-201ENST00000562956 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
LINC00838-201ENST00000562956 S4R3F8 94 aa4.7□□□□□ -1.66
LINC00838-201ENST00000562956 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
LINC00838-201ENST00000562956 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
LINC00838-201ENST00000562956 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
LINC00838-201ENST00000562956 K7ERS5 55 aa4.63□□□□□ -1.67
LINC00838-201ENST00000562956 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
LINC00838-201ENST00000562956 MUC2Q02817 5179 aa4.63□□□□□ -1.67
LINC00838-201ENST00000562956 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
LINC00838-201ENST00000562956 A0A0D9SG42 100 aa4.63□□□□□ -1.67
LINC00838-201ENST00000562956 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
LINC00838-201ENST00000562956 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
LINC00838-201ENST00000562956 NDUFAF8A1L188 74 aa4.59□□□□□ -1.68
LINC00838-201ENST00000562956 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
LINC00838-201ENST00000562956 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
LINC00838-201ENST00000562956 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
LINC00838-201ENST00000562956 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
LINC00838-201ENST00000562956 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
LINC00838-201ENST00000562956 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
LINC00838-201ENST00000562956 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
LINC00838-201ENST00000562956 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
LINC00838-201ENST00000562956 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
LINC00838-201ENST00000562956 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
LINC00838-201ENST00000562956 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
LINC00838-201ENST00000562956 M0QZ58 72 aa4.38□□□□□ -1.71
LINC00838-201ENST00000562956 R4GN34 69 aa4.35□□□□□ -1.71
LINC00838-201ENST00000562956 MT1HP80294 61 aa4.33□□□□□ -1.72
LINC00838-201ENST00000562956 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
LINC00838-201ENST00000562956 M0R2T5 61 aa4.29□□□□□ -1.72
LINC00838-201ENST00000562956 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
LINC00838-201ENST00000562956 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
LINC00838-201ENST00000562956 MT2AP02795 61 aa4.19□□□□□ -1.74
LINC00838-201ENST00000562956 MT1FP04733 61 aa4.18□□□□□ -1.74
LINC00838-201ENST00000562956 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
LINC00838-201ENST00000562956 PLAC4Q8WY50 150 aa4.15□□□□□ -1.75
LINC00838-201ENST00000562956 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.75
LINC00838-201ENST00000562956 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
LINC00838-201ENST00000562956 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
LINC00838-201ENST00000562956 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
LINC00838-201ENST00000562956 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
LINC00838-201ENST00000562956 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
LINC00838-201ENST00000562956 MT1BP07438 61 aa3.98□□□□□ -1.77
LINC00838-201ENST00000562956 LCE2BO14633 110 aa3.92□□□□□ -1.78
LINC00838-201ENST00000562956 TNP1P09430 55 aa3.89□□□□□ -1.79
LINC00838-201ENST00000562956 MT1XP80297 61 aa3.88□□□□□ -1.79
LINC00838-201ENST00000562956 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
LINC00838-201ENST00000562956 USH2AO75445 5202 aa3.83□□□□□ -1.8
LINC00838-201ENST00000562956 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
LINC00838-201ENST00000562956 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
LINC00838-201ENST00000562956 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
LINC00838-201ENST00000562956 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
LINC00838-201ENST00000562956 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
LINC00838-201ENST00000562956 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
LINC00838-201ENST00000562956 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
LINC00838-201ENST00000562956 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
LINC00838-201ENST00000562956 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
LINC00838-201ENST00000562956 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
LINC00838-201ENST00000562956 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
LINC00838-201ENST00000562956 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
LINC00838-201ENST00000562956 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
LINC00838-201ENST00000562956 KMT2DO14686 5537 aa3.6□□□□□ -1.83
LINC00838-201ENST00000562956 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
LINC00838-201ENST00000562956 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
LINC00838-201ENST00000562956 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
LINC00838-201ENST00000562956 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
LINC00838-201ENST00000562956 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
LINC00838-201ENST00000562956 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
LINC00838-201ENST00000562956 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
LINC00838-201ENST00000562956 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
LINC00838-201ENST00000562956 INE1O15225 51 aa3.45□□□□□ -1.86
LINC00838-201ENST00000562956 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
LINC00838-201ENST00000562956 MT1EP04732 61 aa3.38□□□□□ -1.87
LINC00838-201ENST00000562956 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms