RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 APCP25054 2843 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 SONP18583 2426 aaKnown RBP1.87□□□□□ -2.11
CHD9-206ENST00000562791 BSNQ9UPA5 3926 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 CEP290O15078 2479 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 LAMA3Q16787 3333 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 BIRC6Q9NR09 4857 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 DNAH8Q96JB1 4490 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 LOC400499M0QZD8 3231 aa1.87□□□□□ -2.11
CHD9-206ENST00000562791 TLN1Q9Y490 2541 aaKnown RBP1.86□□□□□ -2.11
CHD9-206ENST00000562791 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
CHD9-206ENST00000562791 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
CHD9-206ENST00000562791 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
CHD9-206ENST00000562791 MYO9AB2RTY4 2548 aa1.84□□□□□ -2.11
CHD9-206ENST00000562791 RELNP78509 3460 aa1.84□□□□□ -2.11
CHD9-206ENST00000562791 DMBT1Q9UGM3 2413 aaPredicted RBP1.84□□□□□ -2.11
CHD9-206ENST00000562791 SPTAN1Q13813 2472 aaKnown RBP1.84□□□□□ -2.12
CHD9-206ENST00000562791 NBEAL2Q6ZNJ1 2754 aa1.83□□□□□ -2.12
CHD9-206ENST00000562791 TRRAPQ9Y4A5 3859 aa1.83□□□□□ -2.12
CHD9-206ENST00000562791 NIPBLQ6KC79 2804 aaeCLIP1.83□□□□□ -2.12
CHD9-206ENST00000562791 FBN2P35556 2912 aa1.83□□□□□ -2.12
CHD9-206ENST00000562791 TEX15Q9BXT5 2789 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 DNAH2Q9P225 4427 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 HYDINQ4G0P3 5121 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 BRCA2P51587 3418 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 DCHS2Q6V1P9 2916 aa1.82□□□□□ -2.12
CHD9-206ENST00000562791 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
CHD9-206ENST00000562791 STAB1Q9NY15 2570 aa1.81□□□□□ -2.12
CHD9-206ENST00000562791 SMG1Q96Q15 3661 aaKnown RBP1.81□□□□□ -2.12
CHD9-206ENST00000562791 ANK3Q12955 4377 aaKnown RBP1.81□□□□□ -2.12
CHD9-206ENST00000562791 CDH23Q9H251 3354 aa1.8□□□□□ -2.12
CHD9-206ENST00000562791 ASPMQ8IZT6 3477 aa1.8□□□□□ -2.12
CHD9-206ENST00000562791 CFAP46Q8IYW2 2715 aa1.8□□□□□ -2.12
CHD9-206ENST00000562791 DYNC2H1Q8NCM8 4307 aaKnown RBP1.79□□□□□ -2.12
CHD9-206ENST00000562791 KRTAP21-3Q3LHN1 58 aa1.79□□□□□ -2.12
CHD9-206ENST00000562791 ANK2Q01484 3957 aa1.78□□□□□ -2.12
CHD9-206ENST00000562791 LRRK2Q5S007 2527 aa1.78□□□□□ -2.12
CHD9-206ENST00000562791 EPPK1P58107 5090 aaKnown RBP1.78□□□□□ -2.12
CHD9-206ENST00000562791 CENPEQ02224 2701 aa1.78□□□□□ -2.12
CHD9-206ENST00000562791 IGSF10Q6WRI0 2623 aa1.78□□□□□ -2.12
CHD9-206ENST00000562791 CMYA5Q8N3K9 4069 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 UTP20O75691 2785 aaKnown RBP1.77□□□□□ -2.13
CHD9-206ENST00000562791 POLQO75417 2590 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 DNAH10Q8IVF4 4471 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 TNP1P09430 55 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 DNAH17Q9UFH2 4485 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 SACSQ9NZJ4 4579 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 DNAH9Q9NYC9 4486 aa1.77□□□□□ -2.13
CHD9-206ENST00000562791 MTORP42345 2549 aa1.76□□□□□ -2.13
CHD9-206ENST00000562791 COL7A1Q02388 2944 aa1.76□□□□□ -2.13
CHD9-206ENST00000562791 DNAH3Q8TD57 4116 aa1.76□□□□□ -2.13
CHD9-206ENST00000562791 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
CHD9-206ENST00000562791 TGP01266 2768 aa1.75□□□□□ -2.13
CHD9-206ENST00000562791 LYSTQ99698 3801 aa1.75□□□□□ -2.13
CHD9-206ENST00000562791 DNAH6Q9C0G6 4158 aa1.75□□□□□ -2.13
CHD9-206ENST00000562791 USP9YO00507 2555 aaPredicted RBP1.75□□□□□ -2.13
CHD9-206ENST00000562791 HRNRQ86YZ3 2850 aaPredicted RBP1.75□□□□□ -2.13
CHD9-206ENST00000562791 ZFYVE26Q68DK2 2539 aa1.75□□□□□ -2.13
CHD9-206ENST00000562791 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CHD9-206ENST00000562791 TENM4Q6N022 2769 aa1.74□□□□□ -2.13
CHD9-206ENST00000562791 ACANP16112 2415 aa1.74□□□□□ -2.13
CHD9-206ENST00000562791 MYO15AQ9UKN7 3530 aa1.74□□□□□ -2.13
CHD9-206ENST00000562791 SMR3AQ99954 134 aa1.73□□□□□ -2.13
CHD9-206ENST00000562791 ADGRG4Q8IZF6 3080 aa1.73□□□□□ -2.13
CHD9-206ENST00000562791 APOBP04114 4563 aaKnown RBP1.73□□□□□ -2.13
CHD9-206ENST00000562791 CSMD3Q7Z407 3707 aa1.73□□□□□ -2.13
CHD9-206ENST00000562791 PRKDCP78527 4128 aaKnown RBP1.72□□□□□ -2.13
CHD9-206ENST00000562791 FLNAP21333 2647 aaKnown RBP1.72□□□□□ -2.13
CHD9-206ENST00000562791 KMT2CQ8NEZ4 4911 aaKnown RBP1.71□□□□□ -2.14
CHD9-206ENST00000562791 PDZD2O15018 2839 aa1.71□□□□□ -2.14
CHD9-206ENST00000562791 FLNCQ14315 2725 aa1.71□□□□□ -2.14
CHD9-206ENST00000562791 VPS13CQ709C8 3753 aa1.7□□□□□ -2.14
CHD9-206ENST00000562791 C9orf92A6NGG3 77 aa1.7□□□□□ -2.14
CHD9-206ENST00000562791 ACACBO00763 2458 aa1.7□□□□□ -2.14
CHD9-206ENST00000562791 DNAH7Q8WXX0 4024 aa1.7□□□□□ -2.14
CHD9-206ENST00000562791 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
CHD9-206ENST00000562791 NBEAL1Q6ZS30 2694 aa1.69□□□□□ -2.14
CHD9-206ENST00000562791 ATRQ13535 2644 aa1.69□□□□□ -2.14
CHD9-206ENST00000562791 PKD1P98161 4303 aa1.68□□□□□ -2.14
CHD9-206ENST00000562791 MXRA5Q9NR99 2828 aa1.67□□□□□ -2.14
CHD9-206ENST00000562791 ABCA13Q86UQ4 5058 aa1.67□□□□□ -2.14
CHD9-206ENST00000562791 PKD1L1Q8TDX9 2849 aa1.67□□□□□ -2.14
CHD9-206ENST00000562791 FAT3Q8TDW7 4589 aa1.66□□□□□ -2.14
CHD9-206ENST00000562791 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
CHD9-206ENST00000562791 ITPR2Q14571 2701 aa1.66□□□□□ -2.14
CHD9-206ENST00000562791 VPS13BQ7Z7G8 4022 aa1.66□□□□□ -2.14
CHD9-206ENST00000562791 RYR2Q92736 4967 aa1.66□□□□□ -2.14
CHD9-206ENST00000562791 KMT2AQ03164 3969 aa1.65□□□□□ -2.14
CHD9-206ENST00000562791 STAB2Q8WWQ8 2551 aa1.65□□□□□ -2.15
CHD9-206ENST00000562791 FLGP20930 4061 aaPredicted RBP1.65□□□□□ -2.15
CHD9-206ENST00000562791 ZANQ9Y493 2812 aa1.64□□□□□ -2.15
CHD9-206ENST00000562791 HIVEP1P15822 2718 aa1.64□□□□□ -2.15
CHD9-206ENST00000562791 HECTD4Q9Y4D8 3996 aa1.64□□□□□ -2.15
CHD9-206ENST00000562791 CSMD2Q7Z408 3487 aa1.64□□□□□ -2.15
CHD9-206ENST00000562791 HSPG2P98160 4391 aa1.63□□□□□ -2.15
CHD9-206ENST00000562791 HERC1Q15751 4861 aa1.63□□□□□ -2.15
CHD9-206ENST00000562791 DNAH5Q8TE73 4624 aa1.63□□□□□ -2.15
CHD9-206ENST00000562791 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
CHD9-206ENST00000562791 SVEP1Q4LDE5 3571 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms