RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
SF3B3-202ENST00000562722 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
SF3B3-202ENST00000562722 SPCS1Q9Y6A9 102 aa5.68□□□□□ -1.5
SF3B3-202ENST00000562722 A0A1B0GV90 55 aa5.67□□□□□ -1.5
SF3B3-202ENST00000562722 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
SF3B3-202ENST00000562722 GTF2H5Q6ZYL4 71 aa5.62□□□□□ -1.51
SF3B3-202ENST00000562722 A0A087WVE0 104 aa5.6□□□□□ -1.51
SF3B3-202ENST00000562722 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
SF3B3-202ENST00000562722 K7EP34 96 aa5.59□□□□□ -1.51
SF3B3-202ENST00000562722 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
SF3B3-202ENST00000562722 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
SF3B3-202ENST00000562722 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
SF3B3-202ENST00000562722 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
SF3B3-202ENST00000562722 PRO0461Q9UI25 63 aa5.55□□□□□ -1.52
SF3B3-202ENST00000562722 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
SF3B3-202ENST00000562722 NDUFC1O43677 76 aa5.54□□□□□ -1.52
SF3B3-202ENST00000562722 SPRR2EP22531 72 aa5.53□□□□□ -1.52
SF3B3-202ENST00000562722 SPRR2BP35325 72 aa5.53□□□□□ -1.52
SF3B3-202ENST00000562722 SPRR2AP35326 72 aa5.53□□□□□ -1.52
SF3B3-202ENST00000562722 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
SF3B3-202ENST00000562722 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
SF3B3-202ENST00000562722 F8W1H4 67 aa5.52□□□□□ -1.53
SF3B3-202ENST00000562722 A8MUN3 132 aa5.51□□□□□ -1.53
SF3B3-202ENST00000562722 H0YAA0 97 aa5.5□□□□□ -1.53
SF3B3-202ENST00000562722 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
SF3B3-202ENST00000562722 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
SF3B3-202ENST00000562722 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
SF3B3-202ENST00000562722 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
SF3B3-202ENST00000562722 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.54
SF3B3-202ENST00000562722 ACYP1P07311 99 aa5.45□□□□□ -1.54
SF3B3-202ENST00000562722 MT1XP80297 61 aa5.45□□□□□ -1.54
SF3B3-202ENST00000562722 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
SF3B3-202ENST00000562722 H0Y9P7 68 aa5.43□□□□□ -1.54
SF3B3-202ENST00000562722 KRTAP4-12Q9BQ66 201 aa5.43□□□□□ -1.54
SF3B3-202ENST00000562722 ATOX1O00244 68 aa5.42□□□□□ -1.54
SF3B3-202ENST00000562722 ETDBQ3ZM63 59 aa5.42□□□□□ -1.54
SF3B3-202ENST00000562722 UQCRQO14949 82 aa5.41□□□□□ -1.54
SF3B3-202ENST00000562722 J3QR89 54 aa5.4□□□□□ -1.54
SF3B3-202ENST00000562722 HIST1H4AP62805 103 aaKnown RBP5.39□□□□□ -1.55
SF3B3-202ENST00000562722 K7ERU9 68 aa5.38□□□□□ -1.55
SF3B3-202ENST00000562722 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
SF3B3-202ENST00000562722 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
SF3B3-202ENST00000562722 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
SF3B3-202ENST00000562722 R4GN34 69 aa5.38□□□□□ -1.55
SF3B3-202ENST00000562722 SPRR2DP22532 72 aa5.36□□□□□ -1.55
SF3B3-202ENST00000562722 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
SF3B3-202ENST00000562722 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
SF3B3-202ENST00000562722 M0QZ58 72 aa5.33□□□□□ -1.56
SF3B3-202ENST00000562722 C20orf197Q8N268 126 aa5.33□□□□□ -1.56
SF3B3-202ENST00000562722 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
SF3B3-202ENST00000562722 P0C880 135 aa5.3□□□□□ -1.56
SF3B3-202ENST00000562722 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
SF3B3-202ENST00000562722 FAM240AA0A1B0GVK7 77 aa5.28□□□□□ -1.56
SF3B3-202ENST00000562722 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
SF3B3-202ENST00000562722 MP68P56378 58 aa5.27□□□□□ -1.57
SF3B3-202ENST00000562722 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
SF3B3-202ENST00000562722 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
SF3B3-202ENST00000562722 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
SF3B3-202ENST00000562722 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
SF3B3-202ENST00000562722 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
SF3B3-202ENST00000562722 PCP4P48539 62 aa5.16□□□□□ -1.58
SF3B3-202ENST00000562722 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
SF3B3-202ENST00000562722 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
SF3B3-202ENST00000562722 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
SF3B3-202ENST00000562722 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
SF3B3-202ENST00000562722 H3BPC8 53 aa5.11□□□□□ -1.59
SF3B3-202ENST00000562722 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
SF3B3-202ENST00000562722 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
SF3B3-202ENST00000562722 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
SF3B3-202ENST00000562722 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
SF3B3-202ENST00000562722 TRAV7A0A075B6U4 112 aa5.05□□□□□ -1.6
SF3B3-202ENST00000562722 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
SF3B3-202ENST00000562722 ACYP2P14621 99 aa5.01□□□□□ -1.61
SF3B3-202ENST00000562722 CHKB-CPT1BH3BT56 60 aa4.97□□□□□ -1.61
SF3B3-202ENST00000562722 CAMK2N1Q7Z7J9 78 aa4.94□□□□□ -1.62
SF3B3-202ENST00000562722 SMIM20Q8N5G0 67 aa4.93□□□□□ -1.62
SF3B3-202ENST00000562722 ANAPC13Q9BS18 74 aa4.93□□□□□ -1.62
SF3B3-202ENST00000562722 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
SF3B3-202ENST00000562722 SERP2Q8N6R1 65 aa4.88□□□□□ -1.63
SF3B3-202ENST00000562722 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
SF3B3-202ENST00000562722 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
SF3B3-202ENST00000562722 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
SF3B3-202ENST00000562722 MT1EP04732 61 aa4.85□□□□□ -1.63
SF3B3-202ENST00000562722 COX7CP15954 63 aa4.85□□□□□ -1.63
SF3B3-202ENST00000562722 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
SF3B3-202ENST00000562722 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
SF3B3-202ENST00000562722 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
SF3B3-202ENST00000562722 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
SF3B3-202ENST00000562722 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
SF3B3-202ENST00000562722 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
SF3B3-202ENST00000562722 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
SF3B3-202ENST00000562722 SNURFQ9Y675 71 aa4.77□□□□□ -1.65
SF3B3-202ENST00000562722 A0A0D9SG42 100 aa4.75□□□□□ -1.65
SF3B3-202ENST00000562722 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
SF3B3-202ENST00000562722 MT1GP13640 62 aa4.71□□□□□ -1.66
SF3B3-202ENST00000562722 MT4P47944 62 aa4.71□□□□□ -1.66
SF3B3-202ENST00000562722 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
SF3B3-202ENST00000562722 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
SF3B3-202ENST00000562722 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
SF3B3-202ENST00000562722 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms