RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
CMTM3-204ENST00000562357 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
CMTM3-204ENST00000562357 A0A1B0GV90 55 aa8.03□□□□□ -1.12
CMTM3-204ENST00000562357 NDUFC1O43677 76 aa8.02□□□□□ -1.13
CMTM3-204ENST00000562357 MP68P56378 58 aa8.01□□□□□ -1.13
CMTM3-204ENST00000562357 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
CMTM3-204ENST00000562357 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
CMTM3-204ENST00000562357 A8MUN3 132 aa8□□□□□ -1.13
CMTM3-204ENST00000562357 J3QR89 54 aa8□□□□□ -1.13
CMTM3-204ENST00000562357 KRTAP20-1Q3LI63 56 aa8□□□□□ -1.13
CMTM3-204ENST00000562357 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
CMTM3-204ENST00000562357 A6NN06 94 aa7.97□□□□□ -1.13
CMTM3-204ENST00000562357 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
CMTM3-204ENST00000562357 NEBP20929 6669 aa7.96□□□□□ -1.14
CMTM3-204ENST00000562357 MT1BP07438 61 aa7.95□□□□□ -1.14
CMTM3-204ENST00000562357 OCR1Q9BZK8 76 aa7.94□□□□□ -1.14
CMTM3-204ENST00000562357 H0YAA0 97 aa7.9□□□□□ -1.14
CMTM3-204ENST00000562357 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
CMTM3-204ENST00000562357 KRTAP6-3Q3LI67 103 aa7.88□□□□□ -1.15
CMTM3-204ENST00000562357 H3BPC8 53 aa7.87□□□□□ -1.15
CMTM3-204ENST00000562357 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
CMTM3-204ENST00000562357 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
CMTM3-204ENST00000562357 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
CMTM3-204ENST00000562357 C20orf197Q8N268 126 aa7.73□□□□□ -1.17
CMTM3-204ENST00000562357 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
CMTM3-204ENST00000562357 R4GN34 69 aa7.67□□□□□ -1.18
CMTM3-204ENST00000562357 K7ERU9 68 aa7.65□□□□□ -1.18
CMTM3-204ENST00000562357 SMIM20Q8N5G0 67 aa7.65□□□□□ -1.18
CMTM3-204ENST00000562357 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
CMTM3-204ENST00000562357 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
CMTM3-204ENST00000562357 TRAV7A0A075B6U4 112 aa7.61□□□□□ -1.19
CMTM3-204ENST00000562357 MT-ATP8P03928 68 aa7.61□□□□□ -1.19
CMTM3-204ENST00000562357 M0QZ58 72 aa7.59□□□□□ -1.19
CMTM3-204ENST00000562357 P0C880 135 aa7.59□□□□□ -1.19
CMTM3-204ENST00000562357 ACYP2P14621 99 aa7.59□□□□□ -1.19
CMTM3-204ENST00000562357 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
CMTM3-204ENST00000562357 MUC12Q9UKN1 5478 aa7.54□□□□□ -1.2
CMTM3-204ENST00000562357 CHKB-CPT1BH3BT56 60 aa7.51□□□□□ -1.21
CMTM3-204ENST00000562357 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
CMTM3-204ENST00000562357 GPR98Q8WXG9 6306 aa7.48□□□□□ -1.21
CMTM3-204ENST00000562357 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
CMTM3-204ENST00000562357 MT1XP80297 61 aa7.47□□□□□ -1.21
CMTM3-204ENST00000562357 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
CMTM3-204ENST00000562357 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
CMTM3-204ENST00000562357 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
CMTM3-204ENST00000562357 SPANXA2-OT1Q8N9U9 137 aa7.36□□□□□ -1.23
CMTM3-204ENST00000562357 KMT2DO14686 5537 aa7.36□□□□□ -1.23
CMTM3-204ENST00000562357 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
CMTM3-204ENST00000562357 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
CMTM3-204ENST00000562357 SPRR2FQ96RM1 72 aa7.32□□□□□ -1.24
CMTM3-204ENST00000562357 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
CMTM3-204ENST00000562357 MDN1Q9NU22 5596 aa7.27□□□□□ -1.24
CMTM3-204ENST00000562357 SPRR2EP22531 72 aa7.21□□□□□ -1.26
CMTM3-204ENST00000562357 SPRR2BP35325 72 aa7.21□□□□□ -1.26
CMTM3-204ENST00000562357 SPRR2AP35326 72 aa7.21□□□□□ -1.26
CMTM3-204ENST00000562357 COA5Q86WW8 74 aa7.15□□□□□ -1.26
CMTM3-204ENST00000562357 SEC61GP60059 68 aa7.13□□□□□ -1.27
CMTM3-204ENST00000562357 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
CMTM3-204ENST00000562357 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
CMTM3-204ENST00000562357 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
CMTM3-204ENST00000562357 COX7CP15954 63 aa7.1□□□□□ -1.27
CMTM3-204ENST00000562357 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
CMTM3-204ENST00000562357 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
CMTM3-204ENST00000562357 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
CMTM3-204ENST00000562357 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
CMTM3-204ENST00000562357 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
CMTM3-204ENST00000562357 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
CMTM3-204ENST00000562357 LCE1AQ5T7P2 110 aa7.06□□□□□ -1.28
CMTM3-204ENST00000562357 SPRR2DP22532 72 aa6.98□□□□□ -1.29
CMTM3-204ENST00000562357 H7BZZ5 65 aa6.97□□□□□ -1.29
CMTM3-204ENST00000562357 A0A0D9SG42 100 aa6.95□□□□□ -1.3
CMTM3-204ENST00000562357 A0A1B0GU33 70 aa6.93□□□□□ -1.3
CMTM3-204ENST00000562357 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.3
CMTM3-204ENST00000562357 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
CMTM3-204ENST00000562357 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
CMTM3-204ENST00000562357 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
CMTM3-204ENST00000562357 A0A1B0GU69 56 aa6.83□□□□□ -1.32
CMTM3-204ENST00000562357 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
CMTM3-204ENST00000562357 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
CMTM3-204ENST00000562357 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
CMTM3-204ENST00000562357 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
CMTM3-204ENST00000562357 CCDC179H3BU77 68 aa6.67□□□□□ -1.34
CMTM3-204ENST00000562357 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
CMTM3-204ENST00000562357 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
CMTM3-204ENST00000562357 A8MU10 97 aa6.63□□□□□ -1.35
CMTM3-204ENST00000562357 MT1EP04732 61 aa6.63□□□□□ -1.35
CMTM3-204ENST00000562357 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
CMTM3-204ENST00000562357 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
CMTM3-204ENST00000562357 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
CMTM3-204ENST00000562357 TNP1P09430 55 aa6.52□□□□□ -1.37
CMTM3-204ENST00000562357 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
CMTM3-204ENST00000562357 TMEM258P61165 79 aa6.49□□□□□ -1.37
CMTM3-204ENST00000562357 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
CMTM3-204ENST00000562357 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
CMTM3-204ENST00000562357 MT1GP13640 62 aa6.45□□□□□ -1.38
CMTM3-204ENST00000562357 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
CMTM3-204ENST00000562357 UQCR11O14957 56 aa6.4□□□□□ -1.38
CMTM3-204ENST00000562357 LCE3AQ5TA76 89 aa6.4□□□□□ -1.38
CMTM3-204ENST00000562357 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
CMTM3-204ENST00000562357 MT1LQ93083 61 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms