RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
SMG1-205ENST00000561947 SPTSSBQ8NFR3 76 aa5.13□□□□□ -1.59
SMG1-205ENST00000561947 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
SMG1-205ENST00000561947 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
SMG1-205ENST00000561947 TPRXLQ17RH7 258 aa5.07□□□□□ -1.6
SMG1-205ENST00000561947 UQCR11O14957 56 aa5.05□□□□□ -1.6
SMG1-205ENST00000561947 PMAIP1Q13794 54 aa5.04□□□□□ -1.6
SMG1-205ENST00000561947 SPATA8Q6RVD6 105 aa5.04□□□□□ -1.6
SMG1-205ENST00000561947 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
SMG1-205ENST00000561947 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
SMG1-205ENST00000561947 LRP2P98164 4655 aa5.01□□□□□ -1.61
SMG1-205ENST00000561947 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
SMG1-205ENST00000561947 A6NN06 94 aa5□□□□□ -1.61
SMG1-205ENST00000561947 LPAP08519 4548 aa4.99□□□□□ -1.61
SMG1-205ENST00000561947 BIRC6Q9NR09 4857 aa4.98□□□□□ -1.61
SMG1-205ENST00000561947 HERC2O95714 4834 aa4.97□□□□□ -1.61
SMG1-205ENST00000561947 S4R3F8 94 aa4.97□□□□□ -1.61
SMG1-205ENST00000561947 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
SMG1-205ENST00000561947 A0A1B0GU33 70 aa4.94□□□□□ -1.62
SMG1-205ENST00000561947 H0YAA0 97 aa4.92□□□□□ -1.62
SMG1-205ENST00000561947 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
SMG1-205ENST00000561947 RBM12B-AS1Q9P1G2 102 aa4.91□□□□□ -1.62
SMG1-205ENST00000561947 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
SMG1-205ENST00000561947 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
SMG1-205ENST00000561947 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
SMG1-205ENST00000561947 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
SMG1-205ENST00000561947 P0C880 135 aa4.79□□□□□ -1.64
SMG1-205ENST00000561947 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
SMG1-205ENST00000561947 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
SMG1-205ENST00000561947 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
SMG1-205ENST00000561947 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
SMG1-205ENST00000561947 K7ERS5 55 aa4.73□□□□□ -1.65
SMG1-205ENST00000561947 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
SMG1-205ENST00000561947 HERC1Q15751 4861 aa4.71□□□□□ -1.66
SMG1-205ENST00000561947 A0A0D9SG42 100 aa4.71□□□□□ -1.66
SMG1-205ENST00000561947 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
SMG1-205ENST00000561947 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
SMG1-205ENST00000561947 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
SMG1-205ENST00000561947 M0QZ58 72 aa4.67□□□□□ -1.66
SMG1-205ENST00000561947 LCE2BO14633 110 aa4.65□□□□□ -1.66
SMG1-205ENST00000561947 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
SMG1-205ENST00000561947 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
SMG1-205ENST00000561947 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
SMG1-205ENST00000561947 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
SMG1-205ENST00000561947 ROMO1P60602 79 aa4.59□□□□□ -1.67
SMG1-205ENST00000561947 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.68
SMG1-205ENST00000561947 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.68
SMG1-205ENST00000561947 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
SMG1-205ENST00000561947 R4GN34 69 aa4.58□□□□□ -1.68
SMG1-205ENST00000561947 MUC2Q02817 5179 aa4.57□□□□□ -1.68
SMG1-205ENST00000561947 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
SMG1-205ENST00000561947 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
SMG1-205ENST00000561947 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
SMG1-205ENST00000561947 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
SMG1-205ENST00000561947 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
SMG1-205ENST00000561947 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.7
SMG1-205ENST00000561947 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.71
SMG1-205ENST00000561947 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
SMG1-205ENST00000561947 MT1HP80294 61 aa4.39□□□□□ -1.71
SMG1-205ENST00000561947 M0R2T5 61 aa4.37□□□□□ -1.71
SMG1-205ENST00000561947 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
SMG1-205ENST00000561947 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
SMG1-205ENST00000561947 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
SMG1-205ENST00000561947 MT2AP02795 61 aa4.28□□□□□ -1.73
SMG1-205ENST00000561947 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
SMG1-205ENST00000561947 MT1FP04733 61 aa4.26□□□□□ -1.73
SMG1-205ENST00000561947 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
SMG1-205ENST00000561947 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
SMG1-205ENST00000561947 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
SMG1-205ENST00000561947 TNP1P09430 55 aa4.15□□□□□ -1.74
SMG1-205ENST00000561947 PP632Q6XCG6 107 aa4.15□□□□□ -1.74
SMG1-205ENST00000561947 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
SMG1-205ENST00000561947 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
SMG1-205ENST00000561947 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
SMG1-205ENST00000561947 MT1BP07438 61 aa4.08□□□□□ -1.76
SMG1-205ENST00000561947 MT1XP80297 61 aa4.01□□□□□ -1.77
SMG1-205ENST00000561947 KRTAP10-5P60370 271 aa4□□□□□ -1.77
SMG1-205ENST00000561947 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SMG1-205ENST00000561947 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
SMG1-205ENST00000561947 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.78
SMG1-205ENST00000561947 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
SMG1-205ENST00000561947 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
SMG1-205ENST00000561947 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
SMG1-205ENST00000561947 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
SMG1-205ENST00000561947 USH2AO75445 5202 aa3.8□□□□□ -1.8
SMG1-205ENST00000561947 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
SMG1-205ENST00000561947 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
SMG1-205ENST00000561947 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
SMG1-205ENST00000561947 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
SMG1-205ENST00000561947 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
SMG1-205ENST00000561947 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
SMG1-205ENST00000561947 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
SMG1-205ENST00000561947 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
SMG1-205ENST00000561947 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
SMG1-205ENST00000561947 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
SMG1-205ENST00000561947 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
SMG1-205ENST00000561947 KMT2DO14686 5537 aa3.65□□□□□ -1.83
SMG1-205ENST00000561947 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
SMG1-205ENST00000561947 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
SMG1-205ENST00000561947 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms