RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 IGLV7-46A0A075B6I9 117 aa3.64□□□□□ -1.83
CAPN3-210ENST00000561817 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
CAPN3-210ENST00000561817 Q8N9P0 234 aaPredicted RBP3.64□□□□□ -1.83
CAPN3-210ENST00000561817 MRPL34Q9BQ48 92 aaKnown RBP3.64□□□□□ -1.83
CAPN3-210ENST00000561817 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
CAPN3-210ENST00000561817 H7BZZ5 65 aa3.62□□□□□ -1.83
CAPN3-210ENST00000561817 SNURFQ9Y675 71 aa3.62□□□□□ -1.83
CAPN3-210ENST00000561817 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
CAPN3-210ENST00000561817 K7ERS5 55 aa3.61□□□□□ -1.83
CAPN3-210ENST00000561817 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
CAPN3-210ENST00000561817 Q5W150 140 aa3.6□□□□□ -1.83
CAPN3-210ENST00000561817 H0Y9P7 68 aa3.59□□□□□ -1.83
CAPN3-210ENST00000561817 H3BPC8 53 aa3.59□□□□□ -1.83
CAPN3-210ENST00000561817 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
CAPN3-210ENST00000561817 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
CAPN3-210ENST00000561817 NDUFC1O43677 76 aa3.58□□□□□ -1.84
CAPN3-210ENST00000561817 FP248Q71RG6 208 aaPredicted RBP3.57□□□□□ -1.84
CAPN3-210ENST00000561817 RETNLBQ9BQ08 111 aa3.57□□□□□ -1.84
CAPN3-210ENST00000561817 LINC00208Q96KT6 92 aa3.56□□□□□ -1.84
CAPN3-210ENST00000561817 A6NED7 52 aa3.55□□□□□ -1.84
CAPN3-210ENST00000561817 A8MUU9 505 aa3.55□□□□□ -1.84
CAPN3-210ENST00000561817 IGKV2-30P06310 120 aa3.55□□□□□ -1.84
CAPN3-210ENST00000561817 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
CAPN3-210ENST00000561817 C20orf166-AS1Q96NR2 134 aa3.55□□□□□ -1.84
CAPN3-210ENST00000561817 HERC1Q15751 4861 aa3.55□□□□□ -1.84
CAPN3-210ENST00000561817 A6NN06 94 aa3.54□□□□□ -1.84
CAPN3-210ENST00000561817 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
CAPN3-210ENST00000561817 C9orf92A6NGG3 77 aa3.52□□□□□ -1.85
CAPN3-210ENST00000561817 ATP11AUNQ6ZP68 121 aa3.52□□□□□ -1.85
CAPN3-210ENST00000561817 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
CAPN3-210ENST00000561817 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
CAPN3-210ENST00000561817 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
CAPN3-210ENST00000561817 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
CAPN3-210ENST00000561817 PCOTHQ58A44 107 aa3.48□□□□□ -1.85
CAPN3-210ENST00000561817 LRP2P98164 4655 aa3.47□□□□□ -1.85
CAPN3-210ENST00000561817 LPAP08519 4548 aa3.46□□□□□ -1.86
CAPN3-210ENST00000561817 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
CAPN3-210ENST00000561817 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
CAPN3-210ENST00000561817 HRES1P13985 223 aa3.45□□□□□ -1.86
CAPN3-210ENST00000561817 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
CAPN3-210ENST00000561817 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
CAPN3-210ENST00000561817 IGKV2D-30A0A075B6S6 120 aa3.44□□□□□ -1.86
CAPN3-210ENST00000561817 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
CAPN3-210ENST00000561817 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
CAPN3-210ENST00000561817 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
CAPN3-210ENST00000561817 ROMO1P60602 79 aa3.41□□□□□ -1.86
CAPN3-210ENST00000561817 SPINK7P58062 85 aa3.4□□□□□ -1.87
CAPN3-210ENST00000561817 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
CAPN3-210ENST00000561817 Q1T7F1 81 aa3.39□□□□□ -1.87
CAPN3-210ENST00000561817 COA5Q86WW8 74 aa3.39□□□□□ -1.87
CAPN3-210ENST00000561817 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
CAPN3-210ENST00000561817 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
CAPN3-210ENST00000561817 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
CAPN3-210ENST00000561817 ACYP2P14621 99 aa3.36□□□□□ -1.87
CAPN3-210ENST00000561817 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
CAPN3-210ENST00000561817 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.87
CAPN3-210ENST00000561817 KRTAP4-1Q9BYQ7 146 aa3.32□□□□□ -1.88
CAPN3-210ENST00000561817 A0A1B0GU33 70 aa3.29□□□□□ -1.88
CAPN3-210ENST00000561817 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
CAPN3-210ENST00000561817 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
CAPN3-210ENST00000561817 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
CAPN3-210ENST00000561817 CHKB-CPT1BH3BT56 60 aa3.26□□□□□ -1.89
CAPN3-210ENST00000561817 SPTSSBQ8NFR3 76 aa3.26□□□□□ -1.89
CAPN3-210ENST00000561817 P0C880 135 aa3.25□□□□□ -1.89
CAPN3-210ENST00000561817 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
CAPN3-210ENST00000561817 Q5VV11 94 aa3.25□□□□□ -1.89
CAPN3-210ENST00000561817 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
CAPN3-210ENST00000561817 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
CAPN3-210ENST00000561817 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
CAPN3-210ENST00000561817 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
CAPN3-210ENST00000561817 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
CAPN3-210ENST00000561817 S4R3F8 94 aa3.2□□□□□ -1.9
CAPN3-210ENST00000561817 MUC2Q02817 5179 aa3.19□□□□□ -1.9
CAPN3-210ENST00000561817 MT3P25713 68 aa3.19□□□□□ -1.9
CAPN3-210ENST00000561817 A0A1B0GU69 56 aa3.17□□□□□ -1.9
CAPN3-210ENST00000561817 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.9
CAPN3-210ENST00000561817 A8MU10 97 aa3.14□□□□□ -1.91
CAPN3-210ENST00000561817 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
CAPN3-210ENST00000561817 M0R2T5 61 aa3.11□□□□□ -1.91
CAPN3-210ENST00000561817 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
CAPN3-210ENST00000561817 R4GN34 69 aa3.11□□□□□ -1.91
CAPN3-210ENST00000561817 H0YAA0 97 aa3.1□□□□□ -1.91
CAPN3-210ENST00000561817 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
CAPN3-210ENST00000561817 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
CAPN3-210ENST00000561817 UQCR11O14957 56 aa3.08□□□□□ -1.92
CAPN3-210ENST00000561817 MT1HP80294 61 aa3.07□□□□□ -1.92
CAPN3-210ENST00000561817 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
CAPN3-210ENST00000561817 M0QZ58 72 aa2.99□□□□□ -1.93
CAPN3-210ENST00000561817 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
CAPN3-210ENST00000561817 MT2AP02795 61 aa2.95□□□□□ -1.94
CAPN3-210ENST00000561817 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
CAPN3-210ENST00000561817 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
CAPN3-210ENST00000561817 A0A0D9SG42 100 aa2.93□□□□□ -1.94
CAPN3-210ENST00000561817 MT1FP04733 61 aa2.93□□□□□ -1.94
CAPN3-210ENST00000561817 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
CAPN3-210ENST00000561817 CRIPTQ9P021 101 aa2.93□□□□□ -1.94
CAPN3-210ENST00000561817 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
CAPN3-210ENST00000561817 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
CAPN3-210ENST00000561817 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
CAPN3-210ENST00000561817 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms