RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 CYSTM1Q9H1C7 97 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 HSPB8Q9UJY1 196 aa0.94□□□□□ -2.26
PTPN9-202ENST00000561731 A0A1B0GW54 56 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 SYS1-DBNDD2H3BUS1 97 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 HSBP1O75506 76 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 CLLU1Q5K131 121 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 MUSTN1Q8IVN3 82 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 TMEM254Q8TBM7 123 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 SNHG12Q9BXW3 62 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 TTTY13Q9BZ97 58 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 S4R3F8 94 aa0.93□□□□□ -2.26
PTPN9-202ENST00000561731 MMP24-AS1A0A0U1RRL7 71 aa0.92□□□□□ -2.26
PTPN9-202ENST00000561731 H0YGX0 51 aa0.92□□□□□ -2.26
PTPN9-202ENST00000561731 H3BMG7 143 aa0.92□□□□□ -2.26
PTPN9-202ENST00000561731 H3BQ85 93 aa0.92□□□□□ -2.26
PTPN9-202ENST00000561731 MT1MQ8N339 61 aa0.92□□□□□ -2.26
PTPN9-202ENST00000561731 A8MUN3 132 aa0.91□□□□□ -2.26
PTPN9-202ENST00000561731 PSPHP1O15172 72 aa0.91□□□□□ -2.26
PTPN9-202ENST00000561731 TRGC2P03986 189 aa0.91□□□□□ -2.26
PTPN9-202ENST00000561731 PSMB2P49721 201 aa0.91□□□□□ -2.26
PTPN9-202ENST00000561731 RBM3P98179 157 aaKnown RBP0.91□□□□□ -2.26
PTPN9-202ENST00000561731 C12orf57Q99622 126 aa0.91□□□□□ -2.26
PTPN9-202ENST00000561731 MRPL34Q9BQ48 92 aaKnown RBP0.91□□□□□ -2.26
PTPN9-202ENST00000561731 PMCHL2Q9BQD1 86 aa0.91□□□□□ -2.26
PTPN9-202ENST00000561731 C4orf26Q17RF5 130 aa0.9□□□□□ -2.27
PTPN9-202ENST00000561731 Q6ZQT0 140 aa0.9□□□□□ -2.27
PTPN9-202ENST00000561731 ANKRD29Q8N6D5 301 aa0.9□□□□□ -2.27
PTPN9-202ENST00000561731 A0A0B4J2C4 111 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 K7ERS5 55 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 TRACP01848 142 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 CCKP06307 115 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 FABP4P15090 132 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 SCGB1D4Q6XE38 83 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 PLAC4Q8WY50 150 aa0.89□□□□□ -2.27
PTPN9-202ENST00000561731 TMEM256-PLSCR3K7ERE1 68 aa0.88□□□□□ -2.27
PTPN9-202ENST00000561731 NDUFB1O75438 58 aa0.88□□□□□ -2.27
PTPN9-202ENST00000561731 MT1LQ93083 61 aa0.88□□□□□ -2.27
PTPN9-202ENST00000561731 hDV103S1A0JD37 113 aa0.87□□□□□ -2.27
PTPN9-202ENST00000561731 A0A087WVE0 104 aa0.86□□□□□ -2.27
PTPN9-202ENST00000561731 DLEU1O43261 78 aa0.86□□□□□ -2.27
PTPN9-202ENST00000561731 SNCGO76070 127 aa0.86□□□□□ -2.27
PTPN9-202ENST00000561731 SVBPQ8N300 66 aa0.86□□□□□ -2.27
PTPN9-202ENST00000561731 ORMDL1Q9P0S3 153 aa0.86□□□□□ -2.27
PTPN9-202ENST00000561731 LOC110117498A0A087WWA1 95 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BKO60814 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BJP06899 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BOP23527 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BBP33778 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BDP58876 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BCP62807 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST2H2BEQ16778 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 KRTAP25-1Q3LHN0 102 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BHQ93079 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BNQ99877 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 HIST1H2BMQ99879 126 aa0.85□□□□□ -2.27
PTPN9-202ENST00000561731 FABP2P12104 132 aa0.84□□□□□ -2.27
PTPN9-202ENST00000561731 PDE6GP18545 87 aa0.84□□□□□ -2.27
PTPN9-202ENST00000561731 HIST3H2BBQ8N257 126 aa0.84□□□□□ -2.27
PTPN9-202ENST00000561731 HIGD1BQ9P298 99 aa0.84□□□□□ -2.27
PTPN9-202ENST00000561731 HCG22E2RYF7 251 aa0.83□□□□□ -2.28
PTPN9-202ENST00000561731 APOC3P02656 99 aa0.83□□□□□ -2.28
PTPN9-202ENST00000561731 NAA38Q9BRA0 125 aaKnown RBP0.83□□□□□ -2.28
PTPN9-202ENST00000561731 C9JAW5 83 aa0.82□□□□□ -2.28
PTPN9-202ENST00000561731 COX8AP10176 69 aa0.82□□□□□ -2.28
PTPN9-202ENST00000561731 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
PTPN9-202ENST00000561731 LYRM7Q5U5X0 104 aa0.82□□□□□ -2.28
PTPN9-202ENST00000561731 JMJD7-PLA2G4BH0Y9G9 81 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 NDUFS5O43920 106 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 DNAL4O96015 105 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 C20orf197Q8N268 126 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 HIST1H2BLQ99880 126 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 CYP4F30PQ9H0H9 118 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 PRO1854Q9UHT4 67 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 PRO0628Q9UI54 55 aa0.81□□□□□ -2.28
PTPN9-202ENST00000561731 LOC105371267A0A1B0GV96 52 aa0.8□□□□□ -2.28
PTPN9-202ENST00000561731 M0QZ58 72 aa0.8□□□□□ -2.28
PTPN9-202ENST00000561731 NDUFC1O43677 76 aa0.8□□□□□ -2.28
PTPN9-202ENST00000561731 SCGB1C2P0DMR2 95 aa0.8□□□□□ -2.28
PTPN9-202ENST00000561731 NDUFA5Q16718 116 aa0.8□□□□□ -2.28
PTPN9-202ENST00000561731 FXYD2P54710 66 aa0.79□□□□□ -2.28
PTPN9-202ENST00000561731 KRTDAPP60985 99 aa0.79□□□□□ -2.28
PTPN9-202ENST00000561731 CASC2Q6XLA1 102 aa0.79□□□□□ -2.28
PTPN9-202ENST00000561731 ATOH7Q8N100 152 aa0.79□□□□□ -2.28
PTPN9-202ENST00000561731 TP53AIP1Q9HCN2 124 aa0.79□□□□□ -2.28
PTPN9-202ENST00000561731 A0A1B0GU33 70 aa0.78□□□□□ -2.28
PTPN9-202ENST00000561731 NREPQ16612 68 aa0.78□□□□□ -2.28
PTPN9-202ENST00000561731 VPS25Q9BRG1 176 aa0.78□□□□□ -2.28
PTPN9-202ENST00000561731 A0A1B0GV72 72 aa0.77□□□□□ -2.29
PTPN9-202ENST00000561731 LOC101927531A0A1B0GV80 90 aa0.77□□□□□ -2.29
PTPN9-202ENST00000561731 A6NED7 52 aa0.77□□□□□ -2.29
PTPN9-202ENST00000561731 COX6CP09669 75 aa0.77□□□□□ -2.29
PTPN9-202ENST00000561731 ANAPC13Q9BS18 74 aa0.77□□□□□ -2.29
PTPN9-202ENST00000561731 A0A0D9SG42 100 aa0.76□□□□□ -2.29
PTPN9-202ENST00000561731 HSBP1L1C9JCN9 74 aa0.76□□□□□ -2.29
PTPN9-202ENST00000561731 BAALC-AS2P0C853 105 aa0.76□□□□□ -2.29
PTPN9-202ENST00000561731 MT1AP04731 61 aa0.75□□□□□ -2.29
PTPN9-202ENST00000561731 C10orf95Q9H7T3 257 aa0.75□□□□□ -2.29
PTPN9-202ENST00000561731 C14orf132Q9NPU4 83 aa0.75□□□□□ -2.29
PTPN9-202ENST00000561731 TRAV22A0A0B4J277 110 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms