RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 KLKP1Q107X0 134 aa11.24□□□□□ -0.61
NME3-202ENST00000561637 LOC101927531A0A1B0GV80 90 aa11.22□□□□□ -0.61
NME3-202ENST00000561637 MDN1Q9NU22 5596 aa11.21□□□□□ -0.61
NME3-202ENST00000561637 KMT2DO14686 5537 aa11.21□□□□□ -0.61
NME3-202ENST00000561637 ACYP1P07311 99 aa11.19□□□□□ -0.62
NME3-202ENST00000561637 HIST1H4AP62805 103 aaKnown RBP11.19□□□□□ -0.62
NME3-202ENST00000561637 FAM240AA0A1B0GVK7 77 aa11.16□□□□□ -0.62
NME3-202ENST00000561637 ATP5EP2Q5VTU8 51 aa11.15□□□□□ -0.62
NME3-202ENST00000561637 H0Y9P7 68 aa11.14□□□□□ -0.63
NME3-202ENST00000561637 UQCRQO14949 82 aa11.11□□□□□ -0.63
NME3-202ENST00000561637 KRTAP2-3P0C7H8 128 aa11.11□□□□□ -0.63
NME3-202ENST00000561637 KRTAP10-5P60370 271 aa11.11□□□□□ -0.63
NME3-202ENST00000561637 KRTAP2-4Q9BYR9 128 aa11.11□□□□□ -0.63
NME3-202ENST00000561637 ATOX1O00244 68 aa11.02□□□□□ -0.65
NME3-202ENST00000561637 IMUPQ9GZP8 106 aa10.98□□□□□ -0.65
NME3-202ENST00000561637 CRIPTQ9P021 101 aa10.98□□□□□ -0.65
NME3-202ENST00000561637 NDUFC1O43677 76 aa10.97□□□□□ -0.65
NME3-202ENST00000561637 LINC00643Q86TS7 51 aa10.97□□□□□ -0.65
NME3-202ENST00000561637 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
NME3-202ENST00000561637 A0A1B0GV90 55 aa10.89□□□□□ -0.67
NME3-202ENST00000561637 H0YAA0 97 aa10.89□□□□□ -0.67
NME3-202ENST00000561637 OCR1Q9BZK8 76 aa10.89□□□□□ -0.67
NME3-202ENST00000561637 ADM2Q7Z4H4 148 aa10.88□□□□□ -0.67
NME3-202ENST00000561637 A8MUN3 132 aa10.85□□□□□ -0.67
NME3-202ENST00000561637 SPRR2EP22531 72 aa10.79□□□□□ -0.68
NME3-202ENST00000561637 SPRR2BP35325 72 aa10.79□□□□□ -0.68
NME3-202ENST00000561637 SPRR2AP35326 72 aa10.79□□□□□ -0.68
NME3-202ENST00000561637 MP68P56378 58 aa10.78□□□□□ -0.68
NME3-202ENST00000561637 SPRR2FQ96RM1 72 aa10.76□□□□□ -0.69
NME3-202ENST00000561637 KRTAP2-2Q9BYT5 123 aa10.71□□□□□ -0.69
NME3-202ENST00000561637 KRTAP2-1Q9BYU5 128 aa10.71□□□□□ -0.69
NME3-202ENST00000561637 P0C880 135 aa10.68□□□□□ -0.7
NME3-202ENST00000561637 MT1XP80297 61 aa10.66□□□□□ -0.7
NME3-202ENST00000561637 DMAC1Q96GE9 116 aa10.6□□□□□ -0.71
NME3-202ENST00000561637 H3BPC8 53 aa10.57□□□□□ -0.72
NME3-202ENST00000561637 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
NME3-202ENST00000561637 LCE1AQ5T7P2 110 aa10.56□□□□□ -0.72
NME3-202ENST00000561637 R4GN34 69 aa10.54□□□□□ -0.72
NME3-202ENST00000561637 M0QZ58 72 aa10.52□□□□□ -0.73
NME3-202ENST00000561637 SCGB1A1P11684 91 aa10.52□□□□□ -0.73
NME3-202ENST00000561637 PLAC4Q8WY50 150 aa10.52□□□□□ -0.73
NME3-202ENST00000561637 J3QR89 54 aa10.51□□□□□ -0.73
NME3-202ENST00000561637 PRO2289Q9P1D8 64 aa10.5□□□□□ -0.73
NME3-202ENST00000561637 C20orf197Q8N268 126 aa10.44□□□□□ -0.74
NME3-202ENST00000561637 SPRR2DP22532 72 aa10.43□□□□□ -0.74
NME3-202ENST00000561637 KRTAP8-1Q8IUC2 63 aa10.43□□□□□ -0.74
NME3-202ENST00000561637 LINC01554Q52M75 96 aa10.41□□□□□ -0.74
NME3-202ENST00000561637 MT-ATP8P03928 68 aa10.36□□□□□ -0.75
NME3-202ENST00000561637 KRTAP12-2P59991 146 aa10.32□□□□□ -0.76
NME3-202ENST00000561637 TRAV7A0A075B6U4 112 aa10.3□□□□□ -0.76
NME3-202ENST00000561637 KRTAP4-8A0A0G2JLE6 195 aa10.29□□□□□ -0.76
NME3-202ENST00000561637 KRTAP4-8Q9BYQ9 185 aa10.29□□□□□ -0.76
NME3-202ENST00000561637 ACYP2P14621 99 aa10.24□□□□□ -0.77
NME3-202ENST00000561637 LCE3BQ5TA77 95 aa10.22□□□□□ -0.77
NME3-202ENST00000561637 KRTAP10-7P60409 375 aaPredicted RBP10.2□□□□□ -0.78
NME3-202ENST00000561637 SNURFQ9Y675 71 aa10.14□□□□□ -0.79
NME3-202ENST00000561637 SMIM20Q8N5G0 67 aa10.13□□□□□ -0.79
NME3-202ENST00000561637 GPR98Q8WXG9 6306 aa10.1□□□□□ -0.79
NME3-202ENST00000561637 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
NME3-202ENST00000561637 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
NME3-202ENST00000561637 K7ERU9 68 aa10.08□□□□□ -0.8
NME3-202ENST00000561637 KRTAP10-12P60413 245 aa10.07□□□□□ -0.8
NME3-202ENST00000561637 KRTAP13-4Q3LI77 160 aa9.97□□□□□ -0.81
NME3-202ENST00000561637 SPANXA2-OT1Q8N9U9 137 aa9.89□□□□□ -0.83
NME3-202ENST00000561637 DSTQ03001 7570 aaKnown RBP9.83□□□□□ -0.84
NME3-202ENST00000561637 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
NME3-202ENST00000561637 KRTAP4-9Q9BYQ8 210 aa9.79□□□□□ -0.84
NME3-202ENST00000561637 COA5Q86WW8 74 aa9.73□□□□□ -0.85
NME3-202ENST00000561637 CAMK2N1Q7Z7J9 78 aa9.68□□□□□ -0.86
NME3-202ENST00000561637 A0A0D9SG42 100 aa9.6□□□□□ -0.87
NME3-202ENST00000561637 CYSTM1Q9H1C7 97 aa9.56□□□□□ -0.88
NME3-202ENST00000561637 SPATA8Q6RVD6 105 aa9.55□□□□□ -0.88
NME3-202ENST00000561637 KRTAP19-7Q3SYF9 63 aa9.53□□□□□ -0.88
NME3-202ENST00000561637 COX7CP15954 63 aa9.49□□□□□ -0.89
NME3-202ENST00000561637 SERP1Q9Y6X1 66 aa9.47□□□□□ -0.89
NME3-202ENST00000561637 SEC61GP60059 68 aa9.45□□□□□ -0.9
NME3-202ENST00000561637 MT1EP04732 61 aa9.44□□□□□ -0.9
NME3-202ENST00000561637 H7BZZ5 65 aa9.43□□□□□ -0.9
NME3-202ENST00000561637 LCE1DQ5T752 114 aa9.43□□□□□ -0.9
NME3-202ENST00000561637 SPINT4Q6UDR6 99 aa9.42□□□□□ -0.9
NME3-202ENST00000561637 LCE5AQ5TCM9 118 aa9.41□□□□□ -0.9
NME3-202ENST00000561637 A0A1B0GU33 70 aa9.4□□□□□ -0.9
NME3-202ENST00000561637 KRTAP12-1P59990 96 aa9.38□□□□□ -0.91
NME3-202ENST00000561637 KRTAP19-3Q7Z4W3 81 aa9.34□□□□□ -0.91
NME3-202ENST00000561637 KRTAP19-5Q3LI72 72 aa9.27□□□□□ -0.93
NME3-202ENST00000561637 HMCN1Q96RW7 5635 aa9.24□□□□□ -0.93
NME3-202ENST00000561637 MT4P47944 62 aa9.23□□□□□ -0.93
NME3-202ENST00000561637 A8MU10 97 aa9.21□□□□□ -0.94
NME3-202ENST00000561637 AHNAK2Q8IVF2 5795 aa9.2□□□□□ -0.94
NME3-202ENST00000561637 A0A1B0GU69 56 aa9.16□□□□□ -0.94
NME3-202ENST00000561637 KRTAP5-10Q6L8G5 202 aa9.16□□□□□ -0.94
NME3-202ENST00000561637 LCE4AQ5TA78 99 aa9.14□□□□□ -0.95
NME3-202ENST00000561637 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
NME3-202ENST00000561637 ANAPC13Q9BS18 74 aa9.08□□□□□ -0.96
NME3-202ENST00000561637 MT1GP13640 62 aa9.06□□□□□ -0.96
NME3-202ENST00000561637 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
NME3-202ENST00000561637 CCDC179H3BU77 68 aa9.01□□□□□ -0.97
NME3-202ENST00000561637 LCE3AQ5TA76 89 aa9□□□□□ -0.97
NME3-202ENST00000561637 MT1MQ8N339 61 aa9□□□□□ -0.97
NME3-202ENST00000561637 MT1LQ93083 61 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms