RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 KMT2DO14686 5537 aa11.78□□□□□ -0.52
SNRPA1-215ENST00000561187 MDN1Q9NU22 5596 aa11.77□□□□□ -0.53
SNRPA1-215ENST00000561187 TRAV22A0A0B4J277 110 aa11.74□□□□□ -0.53
SNRPA1-215ENST00000561187 KRTAP5-9P26371 169 aa11.74□□□□□ -0.53
SNRPA1-215ENST00000561187 ETDBQ3ZM63 59 aa11.72□□□□□ -0.53
SNRPA1-215ENST00000561187 CRIPTQ9P021 101 aa11.71□□□□□ -0.53
SNRPA1-215ENST00000561187 LOC101927531A0A1B0GV80 90 aa11.69□□□□□ -0.54
SNRPA1-215ENST00000561187 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
SNRPA1-215ENST00000561187 F8W1H4 67 aa11.61□□□□□ -0.55
SNRPA1-215ENST00000561187 NDUFC1O43677 76 aa11.59□□□□□ -0.55
SNRPA1-215ENST00000561187 H0Y9P7 68 aa11.55□□□□□ -0.56
SNRPA1-215ENST00000561187 ADM2Q7Z4H4 148 aa11.52□□□□□ -0.57
SNRPA1-215ENST00000561187 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
SNRPA1-215ENST00000561187 H0YAA0 97 aa11.49□□□□□ -0.57
SNRPA1-215ENST00000561187 UQCRQO14949 82 aa11.48□□□□□ -0.57
SNRPA1-215ENST00000561187 A8MUN3 132 aa11.47□□□□□ -0.57
SNRPA1-215ENST00000561187 ATOX1O00244 68 aa11.44□□□□□ -0.58
SNRPA1-215ENST00000561187 SPRR2FQ96RM1 72 aa11.44□□□□□ -0.58
SNRPA1-215ENST00000561187 ACYP1P07311 99 aa11.43□□□□□ -0.58
SNRPA1-215ENST00000561187 PCP4L1A6NKN8 68 aa11.42□□□□□ -0.58
SNRPA1-215ENST00000561187 MT1XP80297 61 aa11.39□□□□□ -0.59
SNRPA1-215ENST00000561187 ATP5EP2Q5VTU8 51 aa11.39□□□□□ -0.59
SNRPA1-215ENST00000561187 PRO2289Q9P1D8 64 aa11.37□□□□□ -0.59
SNRPA1-215ENST00000561187 SPRR2EP22531 72 aa11.35□□□□□ -0.59
SNRPA1-215ENST00000561187 SPRR2BP35325 72 aa11.35□□□□□ -0.59
SNRPA1-215ENST00000561187 SPRR2AP35326 72 aa11.35□□□□□ -0.59
SNRPA1-215ENST00000561187 LINC00208Q96KT6 92 aa11.32□□□□□ -0.6
SNRPA1-215ENST00000561187 KRTAP2-3P0C7H8 128 aa11.31□□□□□ -0.6
SNRPA1-215ENST00000561187 KRTAP2-4Q9BYR9 128 aa11.31□□□□□ -0.6
SNRPA1-215ENST00000561187 PLAC4Q8WY50 150 aa11.3□□□□□ -0.6
SNRPA1-215ENST00000561187 FAM240AA0A1B0GVK7 77 aa11.29□□□□□ -0.6
SNRPA1-215ENST00000561187 KRTAP8-1Q8IUC2 63 aa11.25□□□□□ -0.61
SNRPA1-215ENST00000561187 P0C880 135 aa11.22□□□□□ -0.61
SNRPA1-215ENST00000561187 R4GN34 69 aa11.22□□□□□ -0.61
SNRPA1-215ENST00000561187 M0QZ58 72 aa11.16□□□□□ -0.62
SNRPA1-215ENST00000561187 MP68P56378 58 aa11.15□□□□□ -0.62
SNRPA1-215ENST00000561187 LINC00643Q86TS7 51 aa11.12□□□□□ -0.63
SNRPA1-215ENST00000561187 KRTAP4-8Q9BYQ9 185 aa11.11□□□□□ -0.63
SNRPA1-215ENST00000561187 OCR1Q9BZK8 76 aa11.11□□□□□ -0.63
SNRPA1-215ENST00000561187 LINC01554Q52M75 96 aa11.09□□□□□ -0.63
SNRPA1-215ENST00000561187 LCE1AQ5T7P2 110 aa11.09□□□□□ -0.63
SNRPA1-215ENST00000561187 KRTAP12-2P59991 146 aa11.08□□□□□ -0.64
SNRPA1-215ENST00000561187 C20orf197Q8N268 126 aa11.07□□□□□ -0.64
SNRPA1-215ENST00000561187 KRTAP4-8A0A0G2JLE6 195 aa11.06□□□□□ -0.64
SNRPA1-215ENST00000561187 SPRR2DP22532 72 aa10.97□□□□□ -0.65
SNRPA1-215ENST00000561187 DMAC1Q96GE9 116 aa10.97□□□□□ -0.65
SNRPA1-215ENST00000561187 KRTAP2-2Q9BYT5 123 aa10.93□□□□□ -0.66
SNRPA1-215ENST00000561187 KRTAP2-1Q9BYU5 128 aa10.93□□□□□ -0.66
SNRPA1-215ENST00000561187 KRTAP10-7P60409 375 aaPredicted RBP10.91□□□□□ -0.66
SNRPA1-215ENST00000561187 H3BPC8 53 aa10.85□□□□□ -0.67
SNRPA1-215ENST00000561187 SCGB1A1P11684 91 aa10.78□□□□□ -0.68
SNRPA1-215ENST00000561187 KRTAP10-12P60413 245 aa10.75□□□□□ -0.69
SNRPA1-215ENST00000561187 MT-ATP8P03928 68 aa10.73□□□□□ -0.69
SNRPA1-215ENST00000561187 A0A1B0GV90 55 aa10.72□□□□□ -0.69
SNRPA1-215ENST00000561187 LCE3BQ5TA77 95 aa10.68□□□□□ -0.7
SNRPA1-215ENST00000561187 TRAV7A0A075B6U4 112 aa10.67□□□□□ -0.7
SNRPA1-215ENST00000561187 ACYP2P14621 99 aa10.61□□□□□ -0.71
SNRPA1-215ENST00000561187 J3QR89 54 aa10.55□□□□□ -0.72
SNRPA1-215ENST00000561187 SPTSSBQ8NFR3 76 aa10.54□□□□□ -0.72
SNRPA1-215ENST00000561187 CHKB-CPT1BH3BT56 60 aa10.5□□□□□ -0.73
SNRPA1-215ENST00000561187 KRTAP4-12Q9BQ66 201 aa10.49□□□□□ -0.73
SNRPA1-215ENST00000561187 KRTAP13-4Q3LI77 160 aa10.35□□□□□ -0.75
SNRPA1-215ENST00000561187 KRTAP9-9Q9BYP9 154 aa10.32□□□□□ -0.76
SNRPA1-215ENST00000561187 KRTAP9-4Q9BYQ2 154 aa10.32□□□□□ -0.76
SNRPA1-215ENST00000561187 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
SNRPA1-215ENST00000561187 CAMK2N1Q7Z7J9 78 aa10.3□□□□□ -0.76
SNRPA1-215ENST00000561187 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
SNRPA1-215ENST00000561187 DSTQ03001 7570 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-215ENST00000561187 GPR98Q8WXG9 6306 aa10.18□□□□□ -0.78
SNRPA1-215ENST00000561187 KRTAP19-7Q3SYF9 63 aa10.16□□□□□ -0.78
SNRPA1-215ENST00000561187 LCE5AQ5TCM9 118 aa10.13□□□□□ -0.79
SNRPA1-215ENST00000561187 MT1EP04732 61 aa10.11□□□□□ -0.79
SNRPA1-215ENST00000561187 KRTAP4-9Q9BYQ8 210 aa10.1□□□□□ -0.79
SNRPA1-215ENST00000561187 KRTAP19-3Q7Z4W3 81 aa10.08□□□□□ -0.8
SNRPA1-215ENST00000561187 SPANXA2-OT1Q8N9U9 137 aa10.07□□□□□ -0.8
SNRPA1-215ENST00000561187 A0A0D9SG42 100 aa10.06□□□□□ -0.8
SNRPA1-215ENST00000561187 K7ERU9 68 aa9.97□□□□□ -0.81
SNRPA1-215ENST00000561187 LCE1DQ5T752 114 aa9.94□□□□□ -0.82
SNRPA1-215ENST00000561187 KRTAP4-7Q9BYR0 210 aa9.94□□□□□ -0.82
SNRPA1-215ENST00000561187 COA5Q86WW8 74 aa9.93□□□□□ -0.82
SNRPA1-215ENST00000561187 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
SNRPA1-215ENST00000561187 SPINT4Q6UDR6 99 aa9.9□□□□□ -0.82
SNRPA1-215ENST00000561187 CYSTM1Q9H1C7 97 aa9.89□□□□□ -0.83
SNRPA1-215ENST00000561187 KRTAP19-5Q3LI72 72 aa9.87□□□□□ -0.83
SNRPA1-215ENST00000561187 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
SNRPA1-215ENST00000561187 SEC61GP60059 68 aa9.84□□□□□ -0.83
SNRPA1-215ENST00000561187 SERP1Q9Y6X1 66 aa9.84□□□□□ -0.83
SNRPA1-215ENST00000561187 MT1GP13640 62 aa9.74□□□□□ -0.85
SNRPA1-215ENST00000561187 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
SNRPA1-215ENST00000561187 A0A1B0GU33 70 aa9.72□□□□□ -0.85
SNRPA1-215ENST00000561187 PP632Q6XCG6 107 aa9.68□□□□□ -0.86
SNRPA1-215ENST00000561187 MT4P47944 62 aa9.67□□□□□ -0.86
SNRPA1-215ENST00000561187 HMCN1Q96RW7 5635 aa9.66□□□□□ -0.86
SNRPA1-215ENST00000561187 MT1MQ8N339 61 aa9.66□□□□□ -0.86
SNRPA1-215ENST00000561187 MT1LQ93083 61 aa9.6□□□□□ -0.87
SNRPA1-215ENST00000561187 LCE4AQ5TA78 99 aa9.57□□□□□ -0.88
SNRPA1-215ENST00000561187 KRTAP4-3Q9BYR4 195 aa9.54□□□□□ -0.88
SNRPA1-215ENST00000561187 A8MU10 97 aa9.49□□□□□ -0.89
SNRPA1-215ENST00000561187 LCE3AQ5TA76 89 aa9.49□□□□□ -0.89
SNRPA1-215ENST00000561187 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms