RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
SNX1-213ENST00000561026 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
SNX1-213ENST00000561026 LOC101927531A0A1B0GV80 90 aa7.09□□□□□ -1.27
SNX1-213ENST00000561026 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
SNX1-213ENST00000561026 KRTAP5-9P26371 169 aa7.04□□□□□ -1.28
SNX1-213ENST00000561026 NDUFC1O43677 76 aa7.01□□□□□ -1.29
SNX1-213ENST00000561026 KMT2DO14686 5537 aa7.01□□□□□ -1.29
SNX1-213ENST00000561026 H0YAA0 97 aa7□□□□□ -1.29
SNX1-213ENST00000561026 ACYP1P07311 99 aa7□□□□□ -1.29
SNX1-213ENST00000561026 UQCRQO14949 82 aa6.99□□□□□ -1.29
SNX1-213ENST00000561026 ATOX1O00244 68 aa6.97□□□□□ -1.29
SNX1-213ENST00000561026 H0Y9P7 68 aa6.96□□□□□ -1.29
SNX1-213ENST00000561026 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.29
SNX1-213ENST00000561026 KRTAP20-1Q3LI63 56 aa6.96□□□□□ -1.29
SNX1-213ENST00000561026 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.29
SNX1-213ENST00000561026 MDN1Q9NU22 5596 aa6.96□□□□□ -1.3
SNX1-213ENST00000561026 FAM240AA0A1B0GVK7 77 aa6.94□□□□□ -1.3
SNX1-213ENST00000561026 PCP4L1A6NKN8 68 aa6.93□□□□□ -1.3
SNX1-213ENST00000561026 A8MUN3 132 aa6.91□□□□□ -1.3
SNX1-213ENST00000561026 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
SNX1-213ENST00000561026 LINC00208Q96KT6 92 aa6.84□□□□□ -1.31
SNX1-213ENST00000561026 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
SNX1-213ENST00000561026 MT1XP80297 61 aa6.82□□□□□ -1.32
SNX1-213ENST00000561026 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
SNX1-213ENST00000561026 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
SNX1-213ENST00000561026 MP68P56378 58 aa6.78□□□□□ -1.32
SNX1-213ENST00000561026 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
SNX1-213ENST00000561026 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
SNX1-213ENST00000561026 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
SNX1-213ENST00000561026 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
SNX1-213ENST00000561026 R4GN34 69 aa6.75□□□□□ -1.33
SNX1-213ENST00000561026 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
SNX1-213ENST00000561026 P0C880 135 aa6.73□□□□□ -1.33
SNX1-213ENST00000561026 SPRR2EP22531 72 aa6.72□□□□□ -1.33
SNX1-213ENST00000561026 SPRR2BP35325 72 aa6.72□□□□□ -1.33
SNX1-213ENST00000561026 SPRR2AP35326 72 aa6.72□□□□□ -1.33
SNX1-213ENST00000561026 C20orf197Q8N268 126 aa6.71□□□□□ -1.33
SNX1-213ENST00000561026 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
SNX1-213ENST00000561026 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
SNX1-213ENST00000561026 M0QZ58 72 aa6.69□□□□□ -1.34
SNX1-213ENST00000561026 H3BPC8 53 aa6.66□□□□□ -1.34
SNX1-213ENST00000561026 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
SNX1-213ENST00000561026 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
SNX1-213ENST00000561026 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
SNX1-213ENST00000561026 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
SNX1-213ENST00000561026 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
SNX1-213ENST00000561026 A0A1B0GV90 55 aa6.53□□□□□ -1.36
SNX1-213ENST00000561026 KRTAP2-2Q9BYT5 123 aa6.53□□□□□ -1.36
SNX1-213ENST00000561026 KRTAP2-1Q9BYU5 128 aa6.53□□□□□ -1.36
SNX1-213ENST00000561026 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
SNX1-213ENST00000561026 SPRR2DP22532 72 aa6.5□□□□□ -1.37
SNX1-213ENST00000561026 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
SNX1-213ENST00000561026 J3QR89 54 aa6.49□□□□□ -1.37
SNX1-213ENST00000561026 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
SNX1-213ENST00000561026 ACYP2P14621 99 aa6.46□□□□□ -1.37
SNX1-213ENST00000561026 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
SNX1-213ENST00000561026 MT-ATP8P03928 68 aa6.43□□□□□ -1.38
SNX1-213ENST00000561026 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
SNX1-213ENST00000561026 KRTAP4-12Q9BQ66 201 aa6.42□□□□□ -1.38
SNX1-213ENST00000561026 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
SNX1-213ENST00000561026 SMIM20Q8N5G0 67 aa6.32□□□□□ -1.4
SNX1-213ENST00000561026 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
SNX1-213ENST00000561026 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
SNX1-213ENST00000561026 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
SNX1-213ENST00000561026 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.41
SNX1-213ENST00000561026 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
SNX1-213ENST00000561026 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
SNX1-213ENST00000561026 K7ERU9 68 aa6.15□□□□□ -1.43
SNX1-213ENST00000561026 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
SNX1-213ENST00000561026 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
SNX1-213ENST00000561026 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
SNX1-213ENST00000561026 MT1EP04732 61 aa6.06□□□□□ -1.44
SNX1-213ENST00000561026 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
SNX1-213ENST00000561026 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
SNX1-213ENST00000561026 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
SNX1-213ENST00000561026 GPR98Q8WXG9 6306 aa6.01□□□□□ -1.45
SNX1-213ENST00000561026 COA5Q86WW8 74 aa6.01□□□□□ -1.45
SNX1-213ENST00000561026 A0A0D9SG42 100 aa6□□□□□ -1.45
SNX1-213ENST00000561026 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
SNX1-213ENST00000561026 SEC61GP60059 68 aa5.99□□□□□ -1.45
SNX1-213ENST00000561026 SERP1Q9Y6X1 66 aa5.97□□□□□ -1.45
SNX1-213ENST00000561026 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
SNX1-213ENST00000561026 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
SNX1-213ENST00000561026 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
SNX1-213ENST00000561026 A0A1B0GU33 70 aa5.91□□□□□ -1.46
SNX1-213ENST00000561026 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
SNX1-213ENST00000561026 CYSTM1Q9H1C7 97 aa5.9□□□□□ -1.47
SNX1-213ENST00000561026 MT1GP13640 62 aa5.89□□□□□ -1.47
SNX1-213ENST00000561026 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
SNX1-213ENST00000561026 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SNX1-213ENST00000561026 COX7CP15954 63 aa5.8□□□□□ -1.48
SNX1-213ENST00000561026 H7BZZ5 65 aa5.77□□□□□ -1.49
SNX1-213ENST00000561026 MT1MQ8N339 61 aa5.77□□□□□ -1.49
SNX1-213ENST00000561026 MT1LQ93083 61 aa5.76□□□□□ -1.49
SNX1-213ENST00000561026 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
SNX1-213ENST00000561026 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
SNX1-213ENST00000561026 SMIM26A0A096LP01 95 aa5.73□□□□□ -1.49
SNX1-213ENST00000561026 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
SNX1-213ENST00000561026 A0A1B0GU69 56 aa5.71□□□□□ -1.5
SNX1-213ENST00000561026 A8MU10 97 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms