RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
TPM1-226ENST00000560959 TP53AIP1Q9HCN2 124 aa7.67□□□□□ -1.18
TPM1-226ENST00000560959 A0A087WVE0 104 aa7.65□□□□□ -1.18
TPM1-226ENST00000560959 A8MUN3 132 aa7.65□□□□□ -1.18
TPM1-226ENST00000560959 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
TPM1-226ENST00000560959 GPR98Q8WXG9 6306 aa7.64□□□□□ -1.19
TPM1-226ENST00000560959 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
TPM1-226ENST00000560959 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
TPM1-226ENST00000560959 TSTD3H0UI37 97 aa7.59□□□□□ -1.19
TPM1-226ENST00000560959 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
TPM1-226ENST00000560959 NDUFC1O43677 76 aa7.58□□□□□ -1.2
TPM1-226ENST00000560959 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
TPM1-226ENST00000560959 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
TPM1-226ENST00000560959 LOC101927531A0A1B0GV80 90 aa7.45□□□□□ -1.22
TPM1-226ENST00000560959 DSTQ03001 7570 aaKnown RBP7.43□□□□□ -1.22
TPM1-226ENST00000560959 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
TPM1-226ENST00000560959 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
TPM1-226ENST00000560959 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
TPM1-226ENST00000560959 R4GN34 69 aa7.41□□□□□ -1.22
TPM1-226ENST00000560959 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
TPM1-226ENST00000560959 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
TPM1-226ENST00000560959 K7EP34 96 aa7.37□□□□□ -1.23
TPM1-226ENST00000560959 ACYP1P07311 99 aa7.36□□□□□ -1.23
TPM1-226ENST00000560959 BATFQ16520 125 aa7.34□□□□□ -1.23
TPM1-226ENST00000560959 TAX1BP3O14907 124 aa7.32□□□□□ -1.24
TPM1-226ENST00000560959 C20orf197Q8N268 126 aa7.32□□□□□ -1.24
TPM1-226ENST00000560959 M0QZ58 72 aa7.3□□□□□ -1.24
TPM1-226ENST00000560959 P0C880 135 aa7.27□□□□□ -1.25
TPM1-226ENST00000560959 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
TPM1-226ENST00000560959 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
TPM1-226ENST00000560959 SPCS1Q9Y6A9 102 aa7.25□□□□□ -1.25
TPM1-226ENST00000560959 ATOX1O00244 68 aa7.23□□□□□ -1.25
TPM1-226ENST00000560959 UQCRQO14949 82 aa7.19□□□□□ -1.26
TPM1-226ENST00000560959 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
TPM1-226ENST00000560959 PRO0461Q9UI25 63 aa7.18□□□□□ -1.26
TPM1-226ENST00000560959 H0Y9P7 68 aa7.17□□□□□ -1.26
TPM1-226ENST00000560959 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.26
TPM1-226ENST00000560959 SMIM6P0DI80 62 aa7.15□□□□□ -1.26
TPM1-226ENST00000560959 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
TPM1-226ENST00000560959 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
TPM1-226ENST00000560959 LCE1DQ5T752 114 aa7.05□□□□□ -1.28
TPM1-226ENST00000560959 KRTAP19-3Q7Z4W3 81 aa7.01□□□□□ -1.29
TPM1-226ENST00000560959 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
TPM1-226ENST00000560959 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
TPM1-226ENST00000560959 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
TPM1-226ENST00000560959 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
TPM1-226ENST00000560959 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
TPM1-226ENST00000560959 ATP5EP2Q5VTU8 51 aa6.94□□□□□ -1.3
TPM1-226ENST00000560959 MT1EP04732 61 aa6.93□□□□□ -1.3
TPM1-226ENST00000560959 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
TPM1-226ENST00000560959 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
TPM1-226ENST00000560959 F8W1H4 67 aa6.91□□□□□ -1.3
TPM1-226ENST00000560959 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
TPM1-226ENST00000560959 MP68P56378 58 aa6.9□□□□□ -1.3
TPM1-226ENST00000560959 DMAC1Q96GE9 116 aa6.9□□□□□ -1.3
TPM1-226ENST00000560959 COL5A1-AS1Q5SY13 56 aa6.89□□□□□ -1.31
TPM1-226ENST00000560959 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
TPM1-226ENST00000560959 MT4P47944 62 aa6.86□□□□□ -1.31
TPM1-226ENST00000560959 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
TPM1-226ENST00000560959 GTF2H5Q6ZYL4 71 aa6.84□□□□□ -1.31
TPM1-226ENST00000560959 MT1GP13640 62 aa6.81□□□□□ -1.32
TPM1-226ENST00000560959 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
TPM1-226ENST00000560959 FAM240AA0A1B0GVK7 77 aa6.78□□□□□ -1.32
TPM1-226ENST00000560959 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
TPM1-226ENST00000560959 H3BPC8 53 aa6.77□□□□□ -1.33
TPM1-226ENST00000560959 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
TPM1-226ENST00000560959 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
TPM1-226ENST00000560959 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
TPM1-226ENST00000560959 KRTAP5-7Q6L8G8 165 aa6.69□□□□□ -1.34
TPM1-226ENST00000560959 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
TPM1-226ENST00000560959 ACYP2P14621 99 aa6.65□□□□□ -1.34
TPM1-226ENST00000560959 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
TPM1-226ENST00000560959 MT1MQ8N339 61 aa6.63□□□□□ -1.35
TPM1-226ENST00000560959 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
TPM1-226ENST00000560959 LOC105371267A0A1B0GV96 52 aa6.58□□□□□ -1.36
TPM1-226ENST00000560959 A0A0D9SG42 100 aa6.57□□□□□ -1.36
TPM1-226ENST00000560959 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
TPM1-226ENST00000560959 KRTAP13-4Q3LI77 160 aa6.54□□□□□ -1.36
TPM1-226ENST00000560959 MT1LQ93083 61 aa6.53□□□□□ -1.36
TPM1-226ENST00000560959 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
TPM1-226ENST00000560959 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
TPM1-226ENST00000560959 SCGB1A1P11684 91 aa6.42□□□□□ -1.38
TPM1-226ENST00000560959 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
TPM1-226ENST00000560959 KRTAP20-2Q3LI61 65 aa6.34□□□□□ -1.39
TPM1-226ENST00000560959 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
TPM1-226ENST00000560959 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
TPM1-226ENST00000560959 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
TPM1-226ENST00000560959 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
TPM1-226ENST00000560959 KRTAP12-4P60329 112 aa6.17□□□□□ -1.42
TPM1-226ENST00000560959 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
TPM1-226ENST00000560959 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
TPM1-226ENST00000560959 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
TPM1-226ENST00000560959 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
TPM1-226ENST00000560959 PCP4L1A6NKN8 68 aa6.14□□□□□ -1.43
TPM1-226ENST00000560959 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
TPM1-226ENST00000560959 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
TPM1-226ENST00000560959 SPANXA2-OT1Q8N9U9 137 aa6.13□□□□□ -1.43
TPM1-226ENST00000560959 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
TPM1-226ENST00000560959 SEC61GP60059 68 aa6.11□□□□□ -1.43
TPM1-226ENST00000560959 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms