RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LINC00472Q9H8W2 130 aa4.61□□□□□ -1.67
HERC1-210ENST00000560897 LINC00313P59037 77 aa4.6□□□□□ -1.67
HERC1-210ENST00000560897 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
HERC1-210ENST00000560897 A8MUU9 505 aa4.59□□□□□ -1.67
HERC1-210ENST00000560897 C8orf87E5RJ46 101 aa4.58□□□□□ -1.68
HERC1-210ENST00000560897 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
HERC1-210ENST00000560897 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
HERC1-210ENST00000560897 A0A1B0GVX0 72 aa4.56□□□□□ -1.68
HERC1-210ENST00000560897 HRES1P13985 223 aa4.56□□□□□ -1.68
HERC1-210ENST00000560897 TMEM258P61165 79 aa4.56□□□□□ -1.68
HERC1-210ENST00000560897 DSCR10P59022 87 aa4.55□□□□□ -1.68
HERC1-210ENST00000560897 SMIM20Q8N5G0 67 aa4.55□□□□□ -1.68
HERC1-210ENST00000560897 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
HERC1-210ENST00000560897 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
HERC1-210ENST00000560897 CXCL6P80162 114 aa4.54□□□□□ -1.68
HERC1-210ENST00000560897 PRR15Q8IV56 129 aa4.54□□□□□ -1.68
HERC1-210ENST00000560897 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
HERC1-210ENST00000560897 IGKV3D-7A0A0C4DH55 119 aa4.52□□□□□ -1.69
HERC1-210ENST00000560897 NDUFS5O43920 106 aa4.52□□□□□ -1.69
HERC1-210ENST00000560897 C8orf17Q9NRJ1 99 aa4.52□□□□□ -1.69
HERC1-210ENST00000560897 K7EQZ3 153 aa4.51□□□□□ -1.69
HERC1-210ENST00000560897 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
HERC1-210ENST00000560897 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
HERC1-210ENST00000560897 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 SPRR2EP22531 72 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 SPRR2BP35325 72 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 SPRR2AP35326 72 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 CASC2Q6XLA1 102 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 Q8N9L7 120 aa4.49□□□□□ -1.69
HERC1-210ENST00000560897 KRTAP16-1A8MUX0 517 aa4.48□□□□□ -1.69
HERC1-210ENST00000560897 NOTCH2NLQ7Z3S9 236 aa4.48□□□□□ -1.69
HERC1-210ENST00000560897 MRPL34Q9BQ48 92 aaKnown RBP4.48□□□□□ -1.69
HERC1-210ENST00000560897 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
HERC1-210ENST00000560897 A0A087WVE0 104 aa4.47□□□□□ -1.69
HERC1-210ENST00000560897 HCG22E2RYF7 251 aa4.47□□□□□ -1.69
HERC1-210ENST00000560897 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
HERC1-210ENST00000560897 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
HERC1-210ENST00000560897 NDUFC1O43677 76 aa4.46□□□□□ -1.7
HERC1-210ENST00000560897 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
HERC1-210ENST00000560897 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
HERC1-210ENST00000560897 CYSTM1Q9H1C7 97 aa4.43□□□□□ -1.7
HERC1-210ENST00000560897 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
HERC1-210ENST00000560897 TP53AIP1Q9HCN2 124 aa4.42□□□□□ -1.7
HERC1-210ENST00000560897 H7BZZ5 65 aa4.41□□□□□ -1.7
HERC1-210ENST00000560897 Q5VV11 94 aa4.41□□□□□ -1.7
HERC1-210ENST00000560897 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
HERC1-210ENST00000560897 ZCCHC13Q8WW36 166 aaKnown RBP4.4□□□□□ -1.71
HERC1-210ENST00000560897 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
HERC1-210ENST00000560897 C20orf197Q8N268 126 aa4.39□□□□□ -1.71
HERC1-210ENST00000560897 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
HERC1-210ENST00000560897 MT1BP07438 61 aa4.35□□□□□ -1.71
HERC1-210ENST00000560897 SPRR2DP22532 72 aa4.35□□□□□ -1.71
HERC1-210ENST00000560897 SPINK7P58062 85 aa4.35□□□□□ -1.71
HERC1-210ENST00000560897 MP68P56378 58 aa4.34□□□□□ -1.71
HERC1-210ENST00000560897 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
HERC1-210ENST00000560897 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
HERC1-210ENST00000560897 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
HERC1-210ENST00000560897 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
HERC1-210ENST00000560897 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
HERC1-210ENST00000560897 H0Y9P7 68 aa4.29□□□□□ -1.72
HERC1-210ENST00000560897 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
HERC1-210ENST00000560897 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
HERC1-210ENST00000560897 PSPHP1O15172 72 aa4.28□□□□□ -1.72
HERC1-210ENST00000560897 Q5W150 140 aa4.28□□□□□ -1.72
HERC1-210ENST00000560897 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
HERC1-210ENST00000560897 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
HERC1-210ENST00000560897 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
HERC1-210ENST00000560897 H3BPC8 53 aa4.26□□□□□ -1.73
HERC1-210ENST00000560897 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
HERC1-210ENST00000560897 C1orf64Q8NEQ6 169 aa4.26□□□□□ -1.73
HERC1-210ENST00000560897 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
HERC1-210ENST00000560897 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
HERC1-210ENST00000560897 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
HERC1-210ENST00000560897 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
HERC1-210ENST00000560897 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
HERC1-210ENST00000560897 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HERC1-210ENST00000560897 Q1T7F1 81 aa4.19□□□□□ -1.74
HERC1-210ENST00000560897 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
HERC1-210ENST00000560897 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
HERC1-210ENST00000560897 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
HERC1-210ENST00000560897 A8MUN3 132 aa4.11□□□□□ -1.75
HERC1-210ENST00000560897 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
HERC1-210ENST00000560897 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
HERC1-210ENST00000560897 S4R3F8 94 aa4.09□□□□□ -1.75
HERC1-210ENST00000560897 ACYP2P14621 99 aa4.08□□□□□ -1.76
HERC1-210ENST00000560897 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
HERC1-210ENST00000560897 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
HERC1-210ENST00000560897 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
HERC1-210ENST00000560897 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
HERC1-210ENST00000560897 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
HERC1-210ENST00000560897 LCA10Q71F78 164 aa4.02□□□□□ -1.77
HERC1-210ENST00000560897 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
HERC1-210ENST00000560897 COA5Q86WW8 74 aa4.01□□□□□ -1.77
HERC1-210ENST00000560897 CRIPTQ9P021 101 aa4□□□□□ -1.77
HERC1-210ENST00000560897 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
HERC1-210ENST00000560897 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
HERC1-210ENST00000560897 MT1XP80297 61 aa3.95□□□□□ -1.78
HERC1-210ENST00000560897 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
HERC1-210ENST00000560897 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms