RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
ZEB1-219ENST00000560721 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
ZEB1-219ENST00000560721 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
ZEB1-219ENST00000560721 HRES1P13985 223 aa3.04□□□□□ -1.92
ZEB1-219ENST00000560721 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
ZEB1-219ENST00000560721 EPPK1P58107 5090 aaKnown RBP3.03□□□□□ -1.92
ZEB1-219ENST00000560721 A6NN06 94 aa3.03□□□□□ -1.92
ZEB1-219ENST00000560721 SPINK7P58062 85 aa3.03□□□□□ -1.92
ZEB1-219ENST00000560721 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
ZEB1-219ENST00000560721 A0A087X002 238 aa3.03□□□□□ -1.93
ZEB1-219ENST00000560721 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.93
ZEB1-219ENST00000560721 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.93
ZEB1-219ENST00000560721 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
ZEB1-219ENST00000560721 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
ZEB1-219ENST00000560721 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
ZEB1-219ENST00000560721 Q5W150 140 aa3□□□□□ -1.93
ZEB1-219ENST00000560721 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
ZEB1-219ENST00000560721 RPL37P61927 97 aaKnown RBP2.98□□□□□ -1.93
ZEB1-219ENST00000560721 LRP1Q07954 4544 aaKnown RBP2.98□□□□□ -1.93
ZEB1-219ENST00000560721 K7ERS5 55 aa2.97□□□□□ -1.93
ZEB1-219ENST00000560721 ACYP2P14621 99 aa2.97□□□□□ -1.93
ZEB1-219ENST00000560721 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
ZEB1-219ENST00000560721 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
ZEB1-219ENST00000560721 PCLOQ9Y6V0 5065 aa2.96□□□□□ -1.94
ZEB1-219ENST00000560721 IGKV2-30P06310 120 aa2.95□□□□□ -1.94
ZEB1-219ENST00000560721 KRTAP19-2Q3LHN2 52 aa2.93□□□□□ -1.94
ZEB1-219ENST00000560721 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
ZEB1-219ENST00000560721 KRTAP4-5Q9BYR2 181 aa2.93□□□□□ -1.94
ZEB1-219ENST00000560721 ROMO1P60602 79 aa2.92□□□□□ -1.94
ZEB1-219ENST00000560721 A0A1B0GU69 56 aa2.9□□□□□ -1.94
ZEB1-219ENST00000560721 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
ZEB1-219ENST00000560721 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
ZEB1-219ENST00000560721 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
ZEB1-219ENST00000560721 H0YAA0 97 aa2.87□□□□□ -1.95
ZEB1-219ENST00000560721 UQCR11O14957 56 aa2.87□□□□□ -1.95
ZEB1-219ENST00000560721 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
ZEB1-219ENST00000560721 SMR3BP02814 79 aaPredicted RBP2.85□□□□□ -1.95
ZEB1-219ENST00000560721 P0C880 135 aa2.84□□□□□ -1.95
ZEB1-219ENST00000560721 LRP2P98164 4655 aa2.81□□□□□ -1.96
ZEB1-219ENST00000560721 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
ZEB1-219ENST00000560721 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
ZEB1-219ENST00000560721 A0A0D9SG42 100 aa2.77□□□□□ -1.97
ZEB1-219ENST00000560721 C10orf95Q9H7T3 257 aa2.76□□□□□ -1.97
ZEB1-219ENST00000560721 COX6B2Q6YFQ2 88 aa2.75□□□□□ -1.97
ZEB1-219ENST00000560721 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
ZEB1-219ENST00000560721 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
ZEB1-219ENST00000560721 H1FX-AS1Q4G0G2 97 aa2.73□□□□□ -1.97
ZEB1-219ENST00000560721 A0A1B0GU33 70 aa2.72□□□□□ -1.97
ZEB1-219ENST00000560721 C9orf92A6NGG3 77 aa2.68□□□□□ -1.98
ZEB1-219ENST00000560721 KRTAP4-1Q9BYQ7 146 aa2.68□□□□□ -1.98
ZEB1-219ENST00000560721 KRTAP10-6P60371 365 aaPredicted RBP2.67□□□□□ -1.98
ZEB1-219ENST00000560721 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
ZEB1-219ENST00000560721 MT1HP80294 61 aa2.66□□□□□ -1.98
ZEB1-219ENST00000560721 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
ZEB1-219ENST00000560721 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
ZEB1-219ENST00000560721 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
ZEB1-219ENST00000560721 R4GN34 69 aa2.61□□□□□ -1.99
ZEB1-219ENST00000560721 KRTAP9-8Q9BYQ0 159 aa2.61□□□□□ -1.99
ZEB1-219ENST00000560721 S4R3F8 94 aa2.58□□□□□ -2
ZEB1-219ENST00000560721 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
ZEB1-219ENST00000560721 LPAP08519 4548 aa2.56□□□□□ -2
ZEB1-219ENST00000560721 KRTAP9-3Q9BYQ3 159 aa2.55□□□□□ -2
ZEB1-219ENST00000560721 RNF213Q63HN8 5207 aa2.54□□□□□ -2
ZEB1-219ENST00000560721 M0QZ58 72 aa2.54□□□□□ -2
ZEB1-219ENST00000560721 FAT4Q6V0I7 4981 aa2.54□□□□□ -2
ZEB1-219ENST00000560721 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.54□□□□□ -2
ZEB1-219ENST00000560721 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
ZEB1-219ENST00000560721 KRTAP12-2P59991 146 aa2.53□□□□□ -2
ZEB1-219ENST00000560721 KRTAP12-1P59990 96 aa2.53□□□□□ -2
ZEB1-219ENST00000560721 MT2AP02795 61 aa2.51□□□□□ -2.01
ZEB1-219ENST00000560721 KRTAP15-1Q3LI76 137 aa2.51□□□□□ -2.01
ZEB1-219ENST00000560721 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
ZEB1-219ENST00000560721 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
ZEB1-219ENST00000560721 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
ZEB1-219ENST00000560721 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
ZEB1-219ENST00000560721 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
ZEB1-219ENST00000560721 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
ZEB1-219ENST00000560721 KRTAP4-7Q9BYR0 210 aa2.45□□□□□ -2.02
ZEB1-219ENST00000560721 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
ZEB1-219ENST00000560721 MT1FP04733 61 aa2.43□□□□□ -2.02
ZEB1-219ENST00000560721 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
ZEB1-219ENST00000560721 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
ZEB1-219ENST00000560721 LCE3BQ5TA77 95 aa2.42□□□□□ -2.02
ZEB1-219ENST00000560721 PLAC4Q8WY50 150 aa2.41□□□□□ -2.02
ZEB1-219ENST00000560721 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
ZEB1-219ENST00000560721 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
ZEB1-219ENST00000560721 MT1BP07438 61 aa2.39□□□□□ -2.03
ZEB1-219ENST00000560721 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
ZEB1-219ENST00000560721 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
ZEB1-219ENST00000560721 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
ZEB1-219ENST00000560721 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
ZEB1-219ENST00000560721 KRTAP10-12P60413 245 aa2.34□□□□□ -2.03
ZEB1-219ENST00000560721 LCE1DQ5T752 114 aa2.34□□□□□ -2.03
ZEB1-219ENST00000560721 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
ZEB1-219ENST00000560721 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
ZEB1-219ENST00000560721 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
ZEB1-219ENST00000560721 MUC2Q02817 5179 aa2.3□□□□□ -2.04
ZEB1-219ENST00000560721 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
ZEB1-219ENST00000560721 USH2AO75445 5202 aa2.28□□□□□ -2.05
ZEB1-219ENST00000560721 MT1XP80297 61 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms