RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
ZEB1-217ENST00000559858 KMT2AQ03164 3969 aa3.42□□□□□ -1.86
ZEB1-217ENST00000559858 DNAH6Q9C0G6 4158 aa3.42□□□□□ -1.86
ZEB1-217ENST00000559858 STARD9Q9P2P6 4700 aa3.41□□□□□ -1.86
ZEB1-217ENST00000559858 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
ZEB1-217ENST00000559858 XP32Q5T750 250 aa3.39□□□□□ -1.87
ZEB1-217ENST00000559858 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
ZEB1-217ENST00000559858 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
ZEB1-217ENST00000559858 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
ZEB1-217ENST00000559858 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
ZEB1-217ENST00000559858 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
ZEB1-217ENST00000559858 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
ZEB1-217ENST00000559858 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
ZEB1-217ENST00000559858 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
ZEB1-217ENST00000559858 M0QZ58 72 aa3.3□□□□□ -1.88
ZEB1-217ENST00000559858 PKD1P98161 4303 aa3.27□□□□□ -1.89
ZEB1-217ENST00000559858 KRTAP10-8P60410 259 aa3.27□□□□□ -1.89
ZEB1-217ENST00000559858 PKHD1L1Q86WI1 4243 aa3.24□□□□□ -1.89
ZEB1-217ENST00000559858 SMR3BP02814 79 aaPredicted RBP3.23□□□□□ -1.89
ZEB1-217ENST00000559858 KRTAP4-8Q9BYQ9 185 aa3.2□□□□□ -1.9
ZEB1-217ENST00000559858 FAT2Q9NYQ8 4349 aa3.2□□□□□ -1.9
ZEB1-217ENST00000559858 PKHD1P08F94 4074 aa3.19□□□□□ -1.9
ZEB1-217ENST00000559858 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
ZEB1-217ENST00000559858 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
ZEB1-217ENST00000559858 LRP1Q07954 4544 aaKnown RBP3.15□□□□□ -1.91
ZEB1-217ENST00000559858 APOBP04114 4563 aaKnown RBP3.15□□□□□ -1.91
ZEB1-217ENST00000559858 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
ZEB1-217ENST00000559858 R4GN34 69 aa3.14□□□□□ -1.91
ZEB1-217ENST00000559858 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
ZEB1-217ENST00000559858 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
ZEB1-217ENST00000559858 HYDINQ4G0P3 5121 aa3.11□□□□□ -1.91
ZEB1-217ENST00000559858 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
ZEB1-217ENST00000559858 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
ZEB1-217ENST00000559858 HSPG2P98160 4391 aa3.1□□□□□ -1.91
ZEB1-217ENST00000559858 TNXBP22105 4242 aa3.1□□□□□ -1.91
ZEB1-217ENST00000559858 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
ZEB1-217ENST00000559858 FAT1Q14517 4588 aa3.08□□□□□ -1.92
ZEB1-217ENST00000559858 MYCBP2O75592 4640 aa3.07□□□□□ -1.92
ZEB1-217ENST00000559858 A0A1B0GVY2 172 aa3.05□□□□□ -1.92
ZEB1-217ENST00000559858 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
ZEB1-217ENST00000559858 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
ZEB1-217ENST00000559858 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
ZEB1-217ENST00000559858 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
ZEB1-217ENST00000559858 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
ZEB1-217ENST00000559858 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
ZEB1-217ENST00000559858 KRTAP23-1A1A580 65 aa2.99□□□□□ -1.93
ZEB1-217ENST00000559858 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
ZEB1-217ENST00000559858 TNP1P09430 55 aa2.95□□□□□ -1.94
ZEB1-217ENST00000559858 Q5VSD8 79 aa2.94□□□□□ -1.94
ZEB1-217ENST00000559858 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
ZEB1-217ENST00000559858 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
ZEB1-217ENST00000559858 INE1O15225 51 aa2.91□□□□□ -1.94
ZEB1-217ENST00000559858 MT1HL1P0DM35 61 aa2.91□□□□□ -1.94
ZEB1-217ENST00000559858 LPAP08519 4548 aa2.91□□□□□ -1.94
ZEB1-217ENST00000559858 LRP2P98164 4655 aa2.88□□□□□ -1.95
ZEB1-217ENST00000559858 DNHD1Q96M86 4753 aa2.87□□□□□ -1.95
ZEB1-217ENST00000559858 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
ZEB1-217ENST00000559858 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
ZEB1-217ENST00000559858 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
ZEB1-217ENST00000559858 KRTAP9-8Q9BYQ0 159 aa2.84□□□□□ -1.96
ZEB1-217ENST00000559858 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
ZEB1-217ENST00000559858 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
ZEB1-217ENST00000559858 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
ZEB1-217ENST00000559858 KRTAP4-1Q9BYQ7 146 aa2.78□□□□□ -1.96
ZEB1-217ENST00000559858 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
ZEB1-217ENST00000559858 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
ZEB1-217ENST00000559858 RYR2Q92736 4967 aa2.77□□□□□ -1.97
ZEB1-217ENST00000559858 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
ZEB1-217ENST00000559858 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
ZEB1-217ENST00000559858 RYR1P21817 5038 aa2.75□□□□□ -1.97
ZEB1-217ENST00000559858 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
ZEB1-217ENST00000559858 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
ZEB1-217ENST00000559858 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
ZEB1-217ENST00000559858 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
ZEB1-217ENST00000559858 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
ZEB1-217ENST00000559858 HERC1Q15751 4861 aa2.68□□□□□ -1.98
ZEB1-217ENST00000559858 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
ZEB1-217ENST00000559858 KRTAP4-5Q9BYR2 181 aa2.65□□□□□ -1.98
ZEB1-217ENST00000559858 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
ZEB1-217ENST00000559858 BIRC6Q9NR09 4857 aa2.64□□□□□ -1.99
ZEB1-217ENST00000559858 KIAA1109Q2LD37 5005 aa2.63□□□□□ -1.99
ZEB1-217ENST00000559858 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
ZEB1-217ENST00000559858 RYR3Q15413 4870 aa2.62□□□□□ -1.99
ZEB1-217ENST00000559858 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
ZEB1-217ENST00000559858 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
ZEB1-217ENST00000559858 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
ZEB1-217ENST00000559858 PCLOQ9Y6V0 5065 aa2.59□□□□□ -1.99
ZEB1-217ENST00000559858 KRTAP10-10P60014 251 aa2.56□□□□□ -2
ZEB1-217ENST00000559858 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
ZEB1-217ENST00000559858 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
ZEB1-217ENST00000559858 KRTAP9-3Q9BYQ3 159 aa2.51□□□□□ -2.01
ZEB1-217ENST00000559858 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
ZEB1-217ENST00000559858 MT1XP80297 61 aa2.48□□□□□ -2.01
ZEB1-217ENST00000559858 M0R2T5 61 aa2.48□□□□□ -2.01
ZEB1-217ENST00000559858 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
ZEB1-217ENST00000559858 MUC2Q02817 5179 aa2.45□□□□□ -2.02
ZEB1-217ENST00000559858 MT1FP04733 61 aa2.45□□□□□ -2.02
ZEB1-217ENST00000559858 MT2AP02795 61 aa2.45□□□□□ -2.02
ZEB1-217ENST00000559858 HERC2O95714 4834 aa2.44□□□□□ -2.02
ZEB1-217ENST00000559858 MT1BP07438 61 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms