RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KRTAP20-1Q3LI63 56 aa8.86□□□□□ -0.99
TSPAN3-206ENST00000559373 LOC101927531A0A1B0GV80 90 aa8.85□□□□□ -0.99
TSPAN3-206ENST00000559373 KRTAP5-9P26371 169 aa8.85□□□□□ -0.99
TSPAN3-206ENST00000559373 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
TSPAN3-206ENST00000559373 PCP4L1A6NKN8 68 aa8.79□□□□□ -1
TSPAN3-206ENST00000559373 H0Y9P7 68 aa8.78□□□□□ -1
TSPAN3-206ENST00000559373 NDUFC1O43677 76 aa8.78□□□□□ -1
TSPAN3-206ENST00000559373 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
TSPAN3-206ENST00000559373 ADM2Q7Z4H4 148 aa8.75□□□□□ -1.01
TSPAN3-206ENST00000559373 KMT2DO14686 5537 aa8.75□□□□□ -1.01
TSPAN3-206ENST00000559373 UQCRQO14949 82 aa8.73□□□□□ -1.01
TSPAN3-206ENST00000559373 H0YAA0 97 aa8.7□□□□□ -1.02
TSPAN3-206ENST00000559373 ACYP1P07311 99 aa8.67□□□□□ -1.02
TSPAN3-206ENST00000559373 MDN1Q9NU22 5596 aa8.67□□□□□ -1.02
TSPAN3-206ENST00000559373 A8MUN3 132 aa8.66□□□□□ -1.02
TSPAN3-206ENST00000559373 ATOX1O00244 68 aa8.66□□□□□ -1.02
TSPAN3-206ENST00000559373 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
TSPAN3-206ENST00000559373 LINC00208Q96KT6 92 aa8.63□□□□□ -1.03
TSPAN3-206ENST00000559373 SPRR2FQ96RM1 72 aa8.63□□□□□ -1.03
TSPAN3-206ENST00000559373 MT1XP80297 61 aa8.62□□□□□ -1.03
TSPAN3-206ENST00000559373 FAM240AA0A1B0GVK7 77 aa8.59□□□□□ -1.03
TSPAN3-206ENST00000559373 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
TSPAN3-206ENST00000559373 SPRR2EP22531 72 aa8.56□□□□□ -1.04
TSPAN3-206ENST00000559373 SPRR2BP35325 72 aa8.56□□□□□ -1.04
TSPAN3-206ENST00000559373 SPRR2AP35326 72 aa8.56□□□□□ -1.04
TSPAN3-206ENST00000559373 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
TSPAN3-206ENST00000559373 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
TSPAN3-206ENST00000559373 P0C880 135 aa8.53□□□□□ -1.04
TSPAN3-206ENST00000559373 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
TSPAN3-206ENST00000559373 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
TSPAN3-206ENST00000559373 R4GN34 69 aa8.49□□□□□ -1.05
TSPAN3-206ENST00000559373 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
TSPAN3-206ENST00000559373 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
TSPAN3-206ENST00000559373 MP68P56378 58 aa8.47□□□□□ -1.05
TSPAN3-206ENST00000559373 M0QZ58 72 aa8.45□□□□□ -1.06
TSPAN3-206ENST00000559373 KRTAP4-8A0A0G2JLE6 195 aa8.41□□□□□ -1.06
TSPAN3-206ENST00000559373 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
TSPAN3-206ENST00000559373 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
TSPAN3-206ENST00000559373 LCE1AQ5T7P2 110 aa8.38□□□□□ -1.07
TSPAN3-206ENST00000559373 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
TSPAN3-206ENST00000559373 KRTAP12-2P59991 146 aa8.36□□□□□ -1.07
TSPAN3-206ENST00000559373 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
TSPAN3-206ENST00000559373 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
TSPAN3-206ENST00000559373 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
TSPAN3-206ENST00000559373 SPRR2DP22532 72 aa8.26□□□□□ -1.09
TSPAN3-206ENST00000559373 A0A1B0GV90 55 aa8.25□□□□□ -1.09
TSPAN3-206ENST00000559373 H3BPC8 53 aa8.24□□□□□ -1.09
TSPAN3-206ENST00000559373 KRTAP2-2Q9BYT5 123 aa8.24□□□□□ -1.09
TSPAN3-206ENST00000559373 KRTAP2-1Q9BYU5 128 aa8.24□□□□□ -1.09
TSPAN3-206ENST00000559373 SCGB1A1P11684 91 aa8.21□□□□□ -1.1
TSPAN3-206ENST00000559373 KRTAP10-12P60413 245 aa8.14□□□□□ -1.11
TSPAN3-206ENST00000559373 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
TSPAN3-206ENST00000559373 TRAV7A0A075B6U4 112 aa8.1□□□□□ -1.11
TSPAN3-206ENST00000559373 ACYP2P14621 99 aa8.08□□□□□ -1.12
TSPAN3-206ENST00000559373 LCE3BQ5TA77 95 aa8.06□□□□□ -1.12
TSPAN3-206ENST00000559373 J3QR89 54 aa8.04□□□□□ -1.12
TSPAN3-206ENST00000559373 SPTSSBQ8NFR3 76 aa7.98□□□□□ -1.13
TSPAN3-206ENST00000559373 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
TSPAN3-206ENST00000559373 SNURFQ9Y675 71 aa7.89□□□□□ -1.15
TSPAN3-206ENST00000559373 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
TSPAN3-206ENST00000559373 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
TSPAN3-206ENST00000559373 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
TSPAN3-206ENST00000559373 K7ERU9 68 aa7.73□□□□□ -1.17
TSPAN3-206ENST00000559373 KRTAP19-7Q3SYF9 63 aa7.71□□□□□ -1.18
TSPAN3-206ENST00000559373 LCE5AQ5TCM9 118 aa7.66□□□□□ -1.18
TSPAN3-206ENST00000559373 SPANXA2-OT1Q8N9U9 137 aa7.66□□□□□ -1.18
TSPAN3-206ENST00000559373 A0A0D9SG42 100 aa7.64□□□□□ -1.19
TSPAN3-206ENST00000559373 MT1EP04732 61 aa7.64□□□□□ -1.19
TSPAN3-206ENST00000559373 KRTAP4-9Q9BYQ8 210 aa7.64□□□□□ -1.19
TSPAN3-206ENST00000559373 DSTQ03001 7570 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-206ENST00000559373 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
TSPAN3-206ENST00000559373 SPATA8Q6RVD6 105 aa7.57□□□□□ -1.2
TSPAN3-206ENST00000559373 COA5Q86WW8 74 aa7.56□□□□□ -1.2
TSPAN3-206ENST00000559373 SERP2Q8N6R1 65 aa7.53□□□□□ -1.2
TSPAN3-206ENST00000559373 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
TSPAN3-206ENST00000559373 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
TSPAN3-206ENST00000559373 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
TSPAN3-206ENST00000559373 SEC61GP60059 68 aa7.47□□□□□ -1.21
TSPAN3-206ENST00000559373 CYSTM1Q9H1C7 97 aa7.46□□□□□ -1.22
TSPAN3-206ENST00000559373 A0A1B0GU33 70 aa7.41□□□□□ -1.22
TSPAN3-206ENST00000559373 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
TSPAN3-206ENST00000559373 MT1GP13640 62 aa7.38□□□□□ -1.23
TSPAN3-206ENST00000559373 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
TSPAN3-206ENST00000559373 GPR98Q8WXG9 6306 aa7.35□□□□□ -1.23
TSPAN3-206ENST00000559373 MT4P47944 62 aa7.31□□□□□ -1.24
TSPAN3-206ENST00000559373 MT1MQ8N339 61 aa7.31□□□□□ -1.24
TSPAN3-206ENST00000559373 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
TSPAN3-206ENST00000559373 MT1LQ93083 61 aa7.27□□□□□ -1.25
TSPAN3-206ENST00000559373 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
TSPAN3-206ENST00000559373 A8MU10 97 aa7.24□□□□□ -1.25
TSPAN3-206ENST00000559373 COX7CP15954 63 aa7.23□□□□□ -1.25
TSPAN3-206ENST00000559373 H7BZZ5 65 aa7.21□□□□□ -1.26
TSPAN3-206ENST00000559373 LCE4AQ5TA78 99 aa7.21□□□□□ -1.26
TSPAN3-206ENST00000559373 LCE3AQ5TA76 89 aa7.2□□□□□ -1.26
TSPAN3-206ENST00000559373 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
TSPAN3-206ENST00000559373 A0A1B0GU69 56 aa7.16□□□□□ -1.26
TSPAN3-206ENST00000559373 SMIM26A0A096LP01 95 aa7.14□□□□□ -1.27
TSPAN3-206ENST00000559373 HMCN1Q96RW7 5635 aa7.1□□□□□ -1.27
TSPAN3-206ENST00000559373 TNP1P09430 55 aa7.07□□□□□ -1.28
TSPAN3-206ENST00000559373 KRTAP4-6Q9BYQ5 205 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms