RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 SPRR2GQ9BYE4 73 aa9.67□□□□□ -0.86
CRNDE-205ENST00000558952 SYNE2Q8WXH0 6885 aaKnown RBP9.65□□□□□ -0.86
CRNDE-205ENST00000558952 A0A1B0GV90 55 aa9.61□□□□□ -0.87
CRNDE-205ENST00000558952 NDUFC1O43677 76 aa9.6□□□□□ -0.87
CRNDE-205ENST00000558952 MT1BP07438 61 aa9.6□□□□□ -0.87
CRNDE-205ENST00000558952 KRTAP19-8Q3LI54 63 aa9.6□□□□□ -0.87
CRNDE-205ENST00000558952 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
CRNDE-205ENST00000558952 IMUPQ9GZP8 106 aa9.59□□□□□ -0.87
CRNDE-205ENST00000558952 A6NN06 94 aa9.57□□□□□ -0.88
CRNDE-205ENST00000558952 A8MUN3 132 aa9.57□□□□□ -0.88
CRNDE-205ENST00000558952 MP68P56378 58 aa9.57□□□□□ -0.88
CRNDE-205ENST00000558952 CRIPTQ9P021 101 aa9.57□□□□□ -0.88
CRNDE-205ENST00000558952 OCR1Q9BZK8 76 aa9.52□□□□□ -0.89
CRNDE-205ENST00000558952 J3QR89 54 aa9.51□□□□□ -0.89
CRNDE-205ENST00000558952 KRTAP6-3Q3LI67 103 aa9.5□□□□□ -0.89
CRNDE-205ENST00000558952 H0YAA0 97 aa9.48□□□□□ -0.89
CRNDE-205ENST00000558952 KRTAP10-5P60370 271 aa9.42□□□□□ -0.9
CRNDE-205ENST00000558952 H3BPC8 53 aa9.4□□□□□ -0.9
CRNDE-205ENST00000558952 SCGB1A1P11684 91 aa9.4□□□□□ -0.9
CRNDE-205ENST00000558952 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
CRNDE-205ENST00000558952 DMAC1Q96GE9 116 aa9.27□□□□□ -0.93
CRNDE-205ENST00000558952 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
CRNDE-205ENST00000558952 R4GN34 69 aa9.19□□□□□ -0.94
CRNDE-205ENST00000558952 P0C880 135 aa9.14□□□□□ -0.95
CRNDE-205ENST00000558952 PLAC4Q8WY50 150 aa9.14□□□□□ -0.95
CRNDE-205ENST00000558952 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
CRNDE-205ENST00000558952 SMIM20Q8N5G0 67 aa9.12□□□□□ -0.95
CRNDE-205ENST00000558952 K7ERU9 68 aa9.11□□□□□ -0.95
CRNDE-205ENST00000558952 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
CRNDE-205ENST00000558952 TRAV7A0A075B6U4 112 aa9.1□□□□□ -0.95
CRNDE-205ENST00000558952 M0QZ58 72 aa9.1□□□□□ -0.95
CRNDE-205ENST00000558952 ACYP2P14621 99 aa9.07□□□□□ -0.96
CRNDE-205ENST00000558952 NEBP20929 6669 aa9.06□□□□□ -0.96
CRNDE-205ENST00000558952 MUC12Q9UKN1 5478 aa9.06□□□□□ -0.96
CRNDE-205ENST00000558952 KRTAP5-9P26371 169 aa9.04□□□□□ -0.96
CRNDE-205ENST00000558952 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
CRNDE-205ENST00000558952 MT1XP80297 61 aa9.01□□□□□ -0.97
CRNDE-205ENST00000558952 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
CRNDE-205ENST00000558952 LINC01554Q52M75 96 aa8.98□□□□□ -0.97
CRNDE-205ENST00000558952 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
CRNDE-205ENST00000558952 SNURFQ9Y675 71 aa8.9□□□□□ -0.98
CRNDE-205ENST00000558952 KMT2DO14686 5537 aa8.87□□□□□ -0.99
CRNDE-205ENST00000558952 KRTAP12-2P59991 146 aa8.82□□□□□ -1
CRNDE-205ENST00000558952 KRTAP20-1Q3LI63 56 aa8.82□□□□□ -1
CRNDE-205ENST00000558952 SPRR2FQ96RM1 72 aa8.81□□□□□ -1
CRNDE-205ENST00000558952 MDN1Q9NU22 5596 aa8.81□□□□□ -1
CRNDE-205ENST00000558952 KRTAP8-1Q8IUC2 63 aa8.79□□□□□ -1
CRNDE-205ENST00000558952 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
CRNDE-205ENST00000558952 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
CRNDE-205ENST00000558952 SPRR2EP22531 72 aa8.69□□□□□ -1.02
CRNDE-205ENST00000558952 SPRR2BP35325 72 aa8.69□□□□□ -1.02
CRNDE-205ENST00000558952 SPRR2AP35326 72 aa8.69□□□□□ -1.02
CRNDE-205ENST00000558952 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
CRNDE-205ENST00000558952 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
CRNDE-205ENST00000558952 KRTAP10-7P60409 375 aaPredicted RBP8.6□□□□□ -1.03
CRNDE-205ENST00000558952 KRTAP2-3P0C7H8 128 aa8.59□□□□□ -1.03
CRNDE-205ENST00000558952 KRTAP2-4Q9BYR9 128 aa8.59□□□□□ -1.03
CRNDE-205ENST00000558952 KRTAP10-12P60413 245 aa8.57□□□□□ -1.04
CRNDE-205ENST00000558952 COA5Q86WW8 74 aa8.55□□□□□ -1.04
CRNDE-205ENST00000558952 LCE1AQ5T7P2 110 aa8.53□□□□□ -1.04
CRNDE-205ENST00000558952 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
CRNDE-205ENST00000558952 COX7CP15954 63 aa8.48□□□□□ -1.05
CRNDE-205ENST00000558952 SEC61GP60059 68 aa8.48□□□□□ -1.05
CRNDE-205ENST00000558952 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
CRNDE-205ENST00000558952 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
CRNDE-205ENST00000558952 SPRR2DP22532 72 aa8.41□□□□□ -1.06
CRNDE-205ENST00000558952 H7BZZ5 65 aa8.34□□□□□ -1.07
CRNDE-205ENST00000558952 A0A0D9SG42 100 aa8.32□□□□□ -1.08
CRNDE-205ENST00000558952 KRTAP2-2Q9BYT5 123 aa8.31□□□□□ -1.08
CRNDE-205ENST00000558952 KRTAP2-1Q9BYU5 128 aa8.31□□□□□ -1.08
CRNDE-205ENST00000558952 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
CRNDE-205ENST00000558952 A0A1B0GU33 70 aa8.28□□□□□ -1.08
CRNDE-205ENST00000558952 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
CRNDE-205ENST00000558952 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
CRNDE-205ENST00000558952 ANAPC13Q9BS18 74 aa8.19□□□□□ -1.1
CRNDE-205ENST00000558952 LCE3BQ5TA77 95 aa8.17□□□□□ -1.1
CRNDE-205ENST00000558952 A0A1B0GU69 56 aa8.16□□□□□ -1.1
CRNDE-205ENST00000558952 KRTAP12-1P59990 96 aa8.11□□□□□ -1.11
CRNDE-205ENST00000558952 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
CRNDE-205ENST00000558952 KRTAP19-7Q3SYF9 63 aa8.04□□□□□ -1.12
CRNDE-205ENST00000558952 MT1EP04732 61 aa7.99□□□□□ -1.13
CRNDE-205ENST00000558952 CCDC179H3BU77 68 aa7.98□□□□□ -1.13
CRNDE-205ENST00000558952 A8MU10 97 aa7.96□□□□□ -1.14
CRNDE-205ENST00000558952 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
CRNDE-205ENST00000558952 LCE5AQ5TCM9 118 aa7.95□□□□□ -1.14
CRNDE-205ENST00000558952 KRTAP19-3Q7Z4W3 81 aa7.95□□□□□ -1.14
CRNDE-205ENST00000558952 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
CRNDE-205ENST00000558952 KRTAP19-5Q3LI72 72 aa7.87□□□□□ -1.15
CRNDE-205ENST00000558952 TNP1P09430 55 aa7.79□□□□□ -1.16
CRNDE-205ENST00000558952 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
CRNDE-205ENST00000558952 MT1GP13640 62 aa7.77□□□□□ -1.17
CRNDE-205ENST00000558952 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
CRNDE-205ENST00000558952 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
CRNDE-205ENST00000558952 DSTQ03001 7570 aaKnown RBP7.73□□□□□ -1.17
CRNDE-205ENST00000558952 TMEM258P61165 79 aa7.72□□□□□ -1.17
CRNDE-205ENST00000558952 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
CRNDE-205ENST00000558952 UQCR11O14957 56 aa7.64□□□□□ -1.19
CRNDE-205ENST00000558952 MT1LQ93083 61 aa7.63□□□□□ -1.19
CRNDE-205ENST00000558952 MT1MQ8N339 61 aa7.61□□□□□ -1.19
CRNDE-205ENST00000558952 KRTAP4-9Q9BYQ8 210 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms