RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 A8MUU9 505 aa4.99□□□□□ -1.61
EXD1-204ENST00000558881 SPINK6Q6UWN8 80 aa4.99□□□□□ -1.61
EXD1-204ENST00000558881 APOBP04114 4563 aaKnown RBP4.97□□□□□ -1.61
EXD1-204ENST00000558881 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
EXD1-204ENST00000558881 FAT1Q14517 4588 aa4.95□□□□□ -1.62
EXD1-204ENST00000558881 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
EXD1-204ENST00000558881 RYR3Q15413 4870 aa4.94□□□□□ -1.62
EXD1-204ENST00000558881 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
EXD1-204ENST00000558881 H0YAA0 97 aa4.92□□□□□ -1.62
EXD1-204ENST00000558881 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
EXD1-204ENST00000558881 TYMSOSQ8TAI1 123 aa4.91□□□□□ -1.62
EXD1-204ENST00000558881 KRTAP16-1A8MUX0 517 aa4.89□□□□□ -1.63
EXD1-204ENST00000558881 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
EXD1-204ENST00000558881 P0C880 135 aa4.87□□□□□ -1.63
EXD1-204ENST00000558881 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
EXD1-204ENST00000558881 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
EXD1-204ENST00000558881 SPINK1P00995 79 aa4.84□□□□□ -1.63
EXD1-204ENST00000558881 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
EXD1-204ENST00000558881 A0A1B0GU33 70 aa4.82□□□□□ -1.64
EXD1-204ENST00000558881 HSPG2P98160 4391 aa4.81□□□□□ -1.64
EXD1-204ENST00000558881 RYR1P21817 5038 aa4.81□□□□□ -1.64
EXD1-204ENST00000558881 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
EXD1-204ENST00000558881 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
EXD1-204ENST00000558881 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
EXD1-204ENST00000558881 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
EXD1-204ENST00000558881 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
EXD1-204ENST00000558881 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
EXD1-204ENST00000558881 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
EXD1-204ENST00000558881 K7ERS5 55 aa4.77□□□□□ -1.65
EXD1-204ENST00000558881 Q5VSD8 79 aa4.77□□□□□ -1.65
EXD1-204ENST00000558881 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
EXD1-204ENST00000558881 KIAA1109Q2LD37 5005 aa4.75□□□□□ -1.65
EXD1-204ENST00000558881 EPPK1P58107 5090 aaKnown RBP4.75□□□□□ -1.65
EXD1-204ENST00000558881 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
EXD1-204ENST00000558881 TNXBP22105 4242 aa4.72□□□□□ -1.65
EXD1-204ENST00000558881 KRTAP10-8P60410 259 aa4.71□□□□□ -1.65
EXD1-204ENST00000558881 C9orf92A6NGG3 77 aa4.71□□□□□ -1.66
EXD1-204ENST00000558881 FAT3Q8TDW7 4589 aa4.7□□□□□ -1.66
EXD1-204ENST00000558881 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
EXD1-204ENST00000558881 C20orf166-AS1Q96NR2 134 aa4.68□□□□□ -1.66
EXD1-204ENST00000558881 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
EXD1-204ENST00000558881 NDUFAF8A1L188 74 aa4.65□□□□□ -1.66
EXD1-204ENST00000558881 TPRXLQ17RH7 258 aa4.65□□□□□ -1.66
EXD1-204ENST00000558881 MYCBP2O75592 4640 aa4.65□□□□□ -1.66
EXD1-204ENST00000558881 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
EXD1-204ENST00000558881 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
EXD1-204ENST00000558881 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
EXD1-204ENST00000558881 KRTAP4-5Q9BYR2 181 aa4.6□□□□□ -1.67
EXD1-204ENST00000558881 DMBT1Q9UGM3 2413 aaPredicted RBP4.57□□□□□ -1.68
EXD1-204ENST00000558881 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
EXD1-204ENST00000558881 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
EXD1-204ENST00000558881 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
EXD1-204ENST00000558881 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
EXD1-204ENST00000558881 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
EXD1-204ENST00000558881 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
EXD1-204ENST00000558881 A0A0D9SG42 100 aa4.49□□□□□ -1.69
EXD1-204ENST00000558881 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
EXD1-204ENST00000558881 HERC2O95714 4834 aa4.46□□□□□ -1.69
EXD1-204ENST00000558881 S4R3F8 94 aa4.46□□□□□ -1.7
EXD1-204ENST00000558881 LPAP08519 4548 aa4.45□□□□□ -1.7
EXD1-204ENST00000558881 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
EXD1-204ENST00000558881 LRP2P98164 4655 aa4.43□□□□□ -1.7
EXD1-204ENST00000558881 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
EXD1-204ENST00000558881 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
EXD1-204ENST00000558881 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
EXD1-204ENST00000558881 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
EXD1-204ENST00000558881 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
EXD1-204ENST00000558881 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
EXD1-204ENST00000558881 M0QZ58 72 aa4.26□□□□□ -1.73
EXD1-204ENST00000558881 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
EXD1-204ENST00000558881 HERC1Q15751 4861 aa4.26□□□□□ -1.73
EXD1-204ENST00000558881 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
EXD1-204ENST00000558881 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
EXD1-204ENST00000558881 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
EXD1-204ENST00000558881 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
EXD1-204ENST00000558881 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
EXD1-204ENST00000558881 MUC2Q02817 5179 aa4.16□□□□□ -1.74
EXD1-204ENST00000558881 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
EXD1-204ENST00000558881 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
EXD1-204ENST00000558881 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
EXD1-204ENST00000558881 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
EXD1-204ENST00000558881 R4GN34 69 aa4.04□□□□□ -1.76
EXD1-204ENST00000558881 UBR4Q5T4S7 5183 aa4.01□□□□□ -1.77
EXD1-204ENST00000558881 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
EXD1-204ENST00000558881 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
EXD1-204ENST00000558881 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
EXD1-204ENST00000558881 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
EXD1-204ENST00000558881 MT3P25713 68 aa3.94□□□□□ -1.78
EXD1-204ENST00000558881 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
EXD1-204ENST00000558881 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
EXD1-204ENST00000558881 MT1HP80294 61 aa3.88□□□□□ -1.79
EXD1-204ENST00000558881 M0R2T5 61 aa3.86□□□□□ -1.79
EXD1-204ENST00000558881 TNP1P09430 55 aa3.79□□□□□ -1.8
EXD1-204ENST00000558881 INE1O15225 51 aa3.78□□□□□ -1.8
EXD1-204ENST00000558881 MT2AP02795 61 aa3.77□□□□□ -1.81
EXD1-204ENST00000558881 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
EXD1-204ENST00000558881 MT1FP04733 61 aa3.76□□□□□ -1.81
EXD1-204ENST00000558881 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
EXD1-204ENST00000558881 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
EXD1-204ENST00000558881 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms