RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 RYR2Q92736 4967 aa5.8□□□□□ -1.48
PCAT29-201ENST00000558411 RYR3Q15413 4870 aa5.78□□□□□ -1.48
PCAT29-201ENST00000558411 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
PCAT29-201ENST00000558411 S4R3F8 94 aa5.77□□□□□ -1.49
PCAT29-201ENST00000558411 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
PCAT29-201ENST00000558411 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
PCAT29-201ENST00000558411 PKD1P98161 4303 aa5.75□□□□□ -1.49
PCAT29-201ENST00000558411 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
PCAT29-201ENST00000558411 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
PCAT29-201ENST00000558411 XP32Q5T750 250 aa5.69□□□□□ -1.5
PCAT29-201ENST00000558411 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
PCAT29-201ENST00000558411 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.5
PCAT29-201ENST00000558411 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
PCAT29-201ENST00000558411 LCE2BO14633 110 aa5.58□□□□□ -1.52
PCAT29-201ENST00000558411 DYNC1H1Q14204 4646 aaKnown RBP5.58□□□□□ -1.52
PCAT29-201ENST00000558411 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
PCAT29-201ENST00000558411 A0A1B0GVY2 172 aa5.57□□□□□ -1.52
PCAT29-201ENST00000558411 M0QZ58 72 aa5.57□□□□□ -1.52
PCAT29-201ENST00000558411 KRTAP10-8P60410 259 aa5.54□□□□□ -1.52
PCAT29-201ENST00000558411 KRTAP10-4P60372 401 aaPredicted RBP5.53□□□□□ -1.52
PCAT29-201ENST00000558411 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
PCAT29-201ENST00000558411 APOBP04114 4563 aaKnown RBP5.51□□□□□ -1.53
PCAT29-201ENST00000558411 SMR3BP02814 79 aaPredicted RBP5.5□□□□□ -1.53
PCAT29-201ENST00000558411 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
PCAT29-201ENST00000558411 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
PCAT29-201ENST00000558411 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
PCAT29-201ENST00000558411 FAT1Q14517 4588 aa5.45□□□□□ -1.54
PCAT29-201ENST00000558411 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
PCAT29-201ENST00000558411 HSPG2P98160 4391 aa5.45□□□□□ -1.54
PCAT29-201ENST00000558411 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
PCAT29-201ENST00000558411 RYR1P21817 5038 aa5.4□□□□□ -1.54
PCAT29-201ENST00000558411 FAT3Q8TDW7 4589 aa5.4□□□□□ -1.54
PCAT29-201ENST00000558411 TNXBP22105 4242 aa5.38□□□□□ -1.55
PCAT29-201ENST00000558411 J3QL48 77 aa5.37□□□□□ -1.55
PCAT29-201ENST00000558411 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
PCAT29-201ENST00000558411 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
PCAT29-201ENST00000558411 R4GN34 69 aa5.28□□□□□ -1.56
PCAT29-201ENST00000558411 Q5VSD8 79 aa5.27□□□□□ -1.57
PCAT29-201ENST00000558411 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
PCAT29-201ENST00000558411 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
PCAT29-201ENST00000558411 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
PCAT29-201ENST00000558411 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
PCAT29-201ENST00000558411 HERC2O95714 4834 aa5.24□□□□□ -1.57
PCAT29-201ENST00000558411 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
PCAT29-201ENST00000558411 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
PCAT29-201ENST00000558411 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
PCAT29-201ENST00000558411 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
PCAT29-201ENST00000558411 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
PCAT29-201ENST00000558411 MT1HL1P0DM35 61 aa5.08□□□□□ -1.6
PCAT29-201ENST00000558411 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
PCAT29-201ENST00000558411 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
PCAT29-201ENST00000558411 LPAP08519 4548 aa5.04□□□□□ -1.6
PCAT29-201ENST00000558411 HERC1Q15751 4861 aa5.01□□□□□ -1.61
PCAT29-201ENST00000558411 TNP1P09430 55 aa4.96□□□□□ -1.62
PCAT29-201ENST00000558411 LRP2P98164 4655 aa4.96□□□□□ -1.62
PCAT29-201ENST00000558411 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
PCAT29-201ENST00000558411 MUC17Q685J3 4493 aa4.83□□□□□ -1.64
PCAT29-201ENST00000558411 HMCN2Q8NDA2 5059 aa4.83□□□□□ -1.64
PCAT29-201ENST00000558411 INE1O15225 51 aa4.82□□□□□ -1.64
PCAT29-201ENST00000558411 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
PCAT29-201ENST00000558411 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
PCAT29-201ENST00000558411 MUC2Q02817 5179 aa4.7□□□□□ -1.66
PCAT29-201ENST00000558411 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
PCAT29-201ENST00000558411 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
PCAT29-201ENST00000558411 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
PCAT29-201ENST00000558411 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
PCAT29-201ENST00000558411 RNF213Q63HN8 5207 aa4.65□□□□□ -1.67
PCAT29-201ENST00000558411 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
PCAT29-201ENST00000558411 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
PCAT29-201ENST00000558411 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
PCAT29-201ENST00000558411 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
PCAT29-201ENST00000558411 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
PCAT29-201ENST00000558411 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
PCAT29-201ENST00000558411 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
PCAT29-201ENST00000558411 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
PCAT29-201ENST00000558411 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
PCAT29-201ENST00000558411 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
PCAT29-201ENST00000558411 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
PCAT29-201ENST00000558411 MT1HP80294 61 aa4.28□□□□□ -1.72
PCAT29-201ENST00000558411 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
PCAT29-201ENST00000558411 MT1XP80297 61 aa4.26□□□□□ -1.73
PCAT29-201ENST00000558411 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
PCAT29-201ENST00000558411 MT1FP04733 61 aa4.22□□□□□ -1.73
PCAT29-201ENST00000558411 MT2AP02795 61 aa4.22□□□□□ -1.73
PCAT29-201ENST00000558411 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
PCAT29-201ENST00000558411 M0R2T5 61 aa4.21□□□□□ -1.74
PCAT29-201ENST00000558411 MT1BP07438 61 aa4.19□□□□□ -1.74
PCAT29-201ENST00000558411 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
PCAT29-201ENST00000558411 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.74
PCAT29-201ENST00000558411 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
PCAT29-201ENST00000558411 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.75
PCAT29-201ENST00000558411 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
PCAT29-201ENST00000558411 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
PCAT29-201ENST00000558411 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
PCAT29-201ENST00000558411 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
PCAT29-201ENST00000558411 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
PCAT29-201ENST00000558411 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
PCAT29-201ENST00000558411 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
PCAT29-201ENST00000558411 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
PCAT29-201ENST00000558411 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms