RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
SEMA4B-204ENST00000558065 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
SEMA4B-204ENST00000558065 PRKDCP78527 4128 aaKnown RBP5.47□□□□□ -1.53
SEMA4B-204ENST00000558065 MYCBP2O75592 4640 aa5.45□□□□□ -1.54
SEMA4B-204ENST00000558065 R4GN34 69 aa5.39□□□□□ -1.55
SEMA4B-204ENST00000558065 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
SEMA4B-204ENST00000558065 Q5VSD8 79 aa5.29□□□□□ -1.56
SEMA4B-204ENST00000558065 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
SEMA4B-204ENST00000558065 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
SEMA4B-204ENST00000558065 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
SEMA4B-204ENST00000558065 INE1O15225 51 aa5.24□□□□□ -1.57
SEMA4B-204ENST00000558065 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
SEMA4B-204ENST00000558065 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
SEMA4B-204ENST00000558065 M0QZ58 72 aa5.18□□□□□ -1.58
SEMA4B-204ENST00000558065 LRP1BQ9NZR2 4599 aa5.16□□□□□ -1.58
SEMA4B-204ENST00000558065 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
SEMA4B-204ENST00000558065 DNHD1Q96M86 4753 aa5.14□□□□□ -1.59
SEMA4B-204ENST00000558065 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
SEMA4B-204ENST00000558065 KRTAP21-3Q3LHN1 58 aa5.13□□□□□ -1.59
SEMA4B-204ENST00000558065 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
SEMA4B-204ENST00000558065 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
SEMA4B-204ENST00000558065 FAT2Q9NYQ8 4349 aa5.04□□□□□ -1.6
SEMA4B-204ENST00000558065 PKHD1L1Q86WI1 4243 aa5□□□□□ -1.61
SEMA4B-204ENST00000558065 A0A1B0GVY2 172 aa5□□□□□ -1.61
SEMA4B-204ENST00000558065 SACSQ9NZJ4 4579 aa4.99□□□□□ -1.61
SEMA4B-204ENST00000558065 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
SEMA4B-204ENST00000558065 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
SEMA4B-204ENST00000558065 HSPG2P98160 4391 aa4.92□□□□□ -1.62
SEMA4B-204ENST00000558065 FAT1Q14517 4588 aa4.91□□□□□ -1.62
SEMA4B-204ENST00000558065 PKD1P98161 4303 aa4.9□□□□□ -1.62
SEMA4B-204ENST00000558065 TNXBP22105 4242 aa4.88□□□□□ -1.63
SEMA4B-204ENST00000558065 M0R2T5 61 aa4.84□□□□□ -1.63
SEMA4B-204ENST00000558065 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
SEMA4B-204ENST00000558065 TNP1P09430 55 aa4.78□□□□□ -1.64
SEMA4B-204ENST00000558065 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
SEMA4B-204ENST00000558065 DYNC1H1Q14204 4646 aaKnown RBP4.77□□□□□ -1.65
SEMA4B-204ENST00000558065 FAT3Q8TDW7 4589 aa4.74□□□□□ -1.65
SEMA4B-204ENST00000558065 LPAP08519 4548 aa4.72□□□□□ -1.65
SEMA4B-204ENST00000558065 HYDINQ4G0P3 5121 aa4.69□□□□□ -1.66
SEMA4B-204ENST00000558065 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
SEMA4B-204ENST00000558065 KRTAP4-5Q9BYR2 181 aa4.68□□□□□ -1.66
SEMA4B-204ENST00000558065 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
SEMA4B-204ENST00000558065 RYR1P21817 5038 aa4.63□□□□□ -1.67
SEMA4B-204ENST00000558065 RYR3Q15413 4870 aa4.56□□□□□ -1.68
SEMA4B-204ENST00000558065 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
SEMA4B-204ENST00000558065 KMT2CQ8NEZ4 4911 aaKnown RBP4.53□□□□□ -1.68
SEMA4B-204ENST00000558065 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
SEMA4B-204ENST00000558065 KRTAP17-1Q9BYP8 105 aa4.5□□□□□ -1.69
SEMA4B-204ENST00000558065 RYR2Q92736 4967 aa4.43□□□□□ -1.7
SEMA4B-204ENST00000558065 LRP2P98164 4655 aa4.39□□□□□ -1.71
SEMA4B-204ENST00000558065 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
SEMA4B-204ENST00000558065 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
SEMA4B-204ENST00000558065 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
SEMA4B-204ENST00000558065 HERC2O95714 4834 aa4.28□□□□□ -1.72
SEMA4B-204ENST00000558065 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
SEMA4B-204ENST00000558065 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
SEMA4B-204ENST00000558065 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
SEMA4B-204ENST00000558065 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.74
SEMA4B-204ENST00000558065 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
SEMA4B-204ENST00000558065 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
SEMA4B-204ENST00000558065 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.76
SEMA4B-204ENST00000558065 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.76
SEMA4B-204ENST00000558065 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.76
SEMA4B-204ENST00000558065 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
SEMA4B-204ENST00000558065 KRTAP19-2Q3LHN2 52 aa4.06□□□□□ -1.76
SEMA4B-204ENST00000558065 MUC2Q02817 5179 aa4.06□□□□□ -1.76
SEMA4B-204ENST00000558065 HERC1Q15751 4861 aa4.05□□□□□ -1.76
SEMA4B-204ENST00000558065 BIRC6Q9NR09 4857 aa3.99□□□□□ -1.77
SEMA4B-204ENST00000558065 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
SEMA4B-204ENST00000558065 MT1HP80294 61 aa3.97□□□□□ -1.77
SEMA4B-204ENST00000558065 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
SEMA4B-204ENST00000558065 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
SEMA4B-204ENST00000558065 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
SEMA4B-204ENST00000558065 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
SEMA4B-204ENST00000558065 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
SEMA4B-204ENST00000558065 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
SEMA4B-204ENST00000558065 MT2AP02795 61 aa3.92□□□□□ -1.78
SEMA4B-204ENST00000558065 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
SEMA4B-204ENST00000558065 MT1FP04733 61 aa3.91□□□□□ -1.78
SEMA4B-204ENST00000558065 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
SEMA4B-204ENST00000558065 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
SEMA4B-204ENST00000558065 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
SEMA4B-204ENST00000558065 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
SEMA4B-204ENST00000558065 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
SEMA4B-204ENST00000558065 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
SEMA4B-204ENST00000558065 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
SEMA4B-204ENST00000558065 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
SEMA4B-204ENST00000558065 LCE2BO14633 110 aa3.73□□□□□ -1.81
SEMA4B-204ENST00000558065 MT1XP80297 61 aa3.72□□□□□ -1.81
SEMA4B-204ENST00000558065 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
SEMA4B-204ENST00000558065 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
SEMA4B-204ENST00000558065 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
SEMA4B-204ENST00000558065 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
SEMA4B-204ENST00000558065 MT1BP07438 61 aa3.65□□□□□ -1.82
SEMA4B-204ENST00000558065 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
SEMA4B-204ENST00000558065 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
SEMA4B-204ENST00000558065 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SEMA4B-204ENST00000558065 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
SEMA4B-204ENST00000558065 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
SEMA4B-204ENST00000558065 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms