RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 HRES1P13985 223 aa3.88□□□□□ -1.79
RD3L-201ENST00000557640 CXCL6P80162 114 aa3.88□□□□□ -1.79
RD3L-201ENST00000557640 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
RD3L-201ENST00000557640 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
RD3L-201ENST00000557640 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
RD3L-201ENST00000557640 MT-ATP8P03928 68 aa3.86□□□□□ -1.79
RD3L-201ENST00000557640 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
RD3L-201ENST00000557640 C8orf17Q9NRJ1 99 aa3.85□□□□□ -1.79
RD3L-201ENST00000557640 ATP5EP2Q5VTU8 51 aa3.84□□□□□ -1.79
RD3L-201ENST00000557640 FAM236DA0A1B0GTK5 79 aa3.83□□□□□ -1.8
RD3L-201ENST00000557640 C8orf87E5RJ46 101 aa3.83□□□□□ -1.8
RD3L-201ENST00000557640 FAM236CP0DP71 79 aa3.83□□□□□ -1.8
RD3L-201ENST00000557640 LINC00313P59037 77 aa3.83□□□□□ -1.8
RD3L-201ENST00000557640 A0A087WVE0 104 aa3.82□□□□□ -1.8
RD3L-201ENST00000557640 NDUFB1O75438 58 aa3.82□□□□□ -1.8
RD3L-201ENST00000557640 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
RD3L-201ENST00000557640 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
RD3L-201ENST00000557640 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
RD3L-201ENST00000557640 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
RD3L-201ENST00000557640 IMUPQ9GZP8 106 aa3.79□□□□□ -1.8
RD3L-201ENST00000557640 hDV103S1A0JD37 113 aa3.78□□□□□ -1.8
RD3L-201ENST00000557640 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
RD3L-201ENST00000557640 CASC2Q6XLA1 102 aa3.78□□□□□ -1.8
RD3L-201ENST00000557640 WFDC13Q8IUB5 93 aa3.78□□□□□ -1.8
RD3L-201ENST00000557640 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
RD3L-201ENST00000557640 Q5W150 140 aa3.76□□□□□ -1.81
RD3L-201ENST00000557640 KMT2DO14686 5537 aa3.75□□□□□ -1.81
RD3L-201ENST00000557640 RBM12B-AS1Q9P1G2 102 aa3.75□□□□□ -1.81
RD3L-201ENST00000557640 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
RD3L-201ENST00000557640 OCR1Q9BZK8 76 aa3.74□□□□□ -1.81
RD3L-201ENST00000557640 ZCCHC13Q8WW36 166 aaKnown RBP3.72□□□□□ -1.81
RD3L-201ENST00000557640 FAM236AA0A1B0GUQ0 79 aa3.7□□□□□ -1.82
RD3L-201ENST00000557640 FAM236BA0A1B0GV22 79 aa3.7□□□□□ -1.82
RD3L-201ENST00000557640 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
RD3L-201ENST00000557640 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
RD3L-201ENST00000557640 NDUFS5O43920 106 aa3.68□□□□□ -1.82
RD3L-201ENST00000557640 TP53AIP1Q9HCN2 124 aa3.68□□□□□ -1.82
RD3L-201ENST00000557640 UQCRQO14949 82 aa3.67□□□□□ -1.82
RD3L-201ENST00000557640 MT1BP07438 61 aa3.67□□□□□ -1.82
RD3L-201ENST00000557640 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.83
RD3L-201ENST00000557640 SPINK7P58062 85 aa3.65□□□□□ -1.83
RD3L-201ENST00000557640 ATOX1O00244 68 aa3.64□□□□□ -1.83
RD3L-201ENST00000557640 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
RD3L-201ENST00000557640 TRAV22A0A0B4J277 110 aa3.63□□□□□ -1.83
RD3L-201ENST00000557640 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
RD3L-201ENST00000557640 A6NN06 94 aa3.62□□□□□ -1.83
RD3L-201ENST00000557640 H0Y9P7 68 aa3.62□□□□□ -1.83
RD3L-201ENST00000557640 SMIM20Q8N5G0 67 aa3.62□□□□□ -1.83
RD3L-201ENST00000557640 SERP2Q8N6R1 65 aa3.62□□□□□ -1.83
RD3L-201ENST00000557640 CYP4F30PQ9H0H9 118 aa3.62□□□□□ -1.83
RD3L-201ENST00000557640 KLKP1Q107X0 134 aa3.6□□□□□ -1.83
RD3L-201ENST00000557640 C1orf64Q8NEQ6 169 aa3.6□□□□□ -1.83
RD3L-201ENST00000557640 LINC00208Q96KT6 92 aa3.6□□□□□ -1.83
RD3L-201ENST00000557640 COX7CP15954 63 aa3.59□□□□□ -1.83
RD3L-201ENST00000557640 LOC101927531A0A1B0GV80 90 aa3.58□□□□□ -1.84
RD3L-201ENST00000557640 H3BPC8 53 aa3.58□□□□□ -1.84
RD3L-201ENST00000557640 C7orf65Q6ZTY9 151 aa3.58□□□□□ -1.84
RD3L-201ENST00000557640 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
RD3L-201ENST00000557640 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
RD3L-201ENST00000557640 MP68P56378 58 aa3.57□□□□□ -1.84
RD3L-201ENST00000557640 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
RD3L-201ENST00000557640 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
RD3L-201ENST00000557640 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
RD3L-201ENST00000557640 SNURFQ9Y675 71 aa3.56□□□□□ -1.84
RD3L-201ENST00000557640 CCDC179H3BU77 68 aa3.55□□□□□ -1.84
RD3L-201ENST00000557640 C4orf26Q17RF5 130 aa3.55□□□□□ -1.84
RD3L-201ENST00000557640 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
RD3L-201ENST00000557640 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
RD3L-201ENST00000557640 Q5VV11 94 aa3.52□□□□□ -1.85
RD3L-201ENST00000557640 SPRR2GQ9BYE4 73 aa3.51□□□□□ -1.85
RD3L-201ENST00000557640 H7BZZ5 65 aa3.5□□□□□ -1.85
RD3L-201ENST00000557640 SPRR2EP22531 72 aa3.5□□□□□ -1.85
RD3L-201ENST00000557640 SPRR2BP35325 72 aa3.5□□□□□ -1.85
RD3L-201ENST00000557640 SPRR2AP35326 72 aa3.5□□□□□ -1.85
RD3L-201ENST00000557640 SPANXA2-OT1Q8N9U9 137 aa3.47□□□□□ -1.85
RD3L-201ENST00000557640 DMAC1Q96GE9 116 aa3.47□□□□□ -1.85
RD3L-201ENST00000557640 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
RD3L-201ENST00000557640 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
RD3L-201ENST00000557640 NDUFC1O43677 76 aa3.45□□□□□ -1.86
RD3L-201ENST00000557640 PCP4P48539 62 aa3.45□□□□□ -1.86
RD3L-201ENST00000557640 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
RD3L-201ENST00000557640 A8MUN3 132 aa3.43□□□□□ -1.86
RD3L-201ENST00000557640 LCA10Q71F78 164 aa3.41□□□□□ -1.86
RD3L-201ENST00000557640 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
RD3L-201ENST00000557640 ACYP2P14621 99 aa3.38□□□□□ -1.87
RD3L-201ENST00000557640 S4R3F8 94 aa3.38□□□□□ -1.87
RD3L-201ENST00000557640 SPRR2DP22532 72 aa3.37□□□□□ -1.87
RD3L-201ENST00000557640 TMEM258P61165 79 aa3.36□□□□□ -1.87
RD3L-201ENST00000557640 MT1XP80297 61 aa3.36□□□□□ -1.87
RD3L-201ENST00000557640 COA5Q86WW8 74 aa3.35□□□□□ -1.87
RD3L-201ENST00000557640 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
RD3L-201ENST00000557640 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
RD3L-201ENST00000557640 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
RD3L-201ENST00000557640 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
RD3L-201ENST00000557640 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
RD3L-201ENST00000557640 H0YAA0 97 aa3.29□□□□□ -1.88
RD3L-201ENST00000557640 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
RD3L-201ENST00000557640 CHKB-CPT1BH3BT56 60 aa3.27□□□□□ -1.89
RD3L-201ENST00000557640 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
RD3L-201ENST00000557640 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms