RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 K7ERU9 68 aa9.09□□□□□ -0.95
HIF1A-211ENST00000557446 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
HIF1A-211ENST00000557446 A8MUN3 132 aa9.04□□□□□ -0.96
HIF1A-211ENST00000557446 H3BPC8 53 aa9.04□□□□□ -0.96
HIF1A-211ENST00000557446 MT-ATP8P03928 68 aa9.04□□□□□ -0.96
HIF1A-211ENST00000557446 NDUFC1O43677 76 aa8.99□□□□□ -0.97
HIF1A-211ENST00000557446 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
HIF1A-211ENST00000557446 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.93□□□□□ -0.98
HIF1A-211ENST00000557446 SPRR2GQ9BYE4 73 aa8.9□□□□□ -0.98
HIF1A-211ENST00000557446 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
HIF1A-211ENST00000557446 FCGBPQ9Y6R7 5405 aaPredicted RBP8.88□□□□□ -0.99
HIF1A-211ENST00000557446 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
HIF1A-211ENST00000557446 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
HIF1A-211ENST00000557446 H0YAA0 97 aa8.85□□□□□ -0.99
HIF1A-211ENST00000557446 KRTAP19-8Q3LI54 63 aa8.82□□□□□ -1
HIF1A-211ENST00000557446 Q5VV11 94 aa8.82□□□□□ -1
HIF1A-211ENST00000557446 CRIPTQ9P021 101 aa8.82□□□□□ -1
HIF1A-211ENST00000557446 MT1BP07438 61 aa8.81□□□□□ -1
HIF1A-211ENST00000557446 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
HIF1A-211ENST00000557446 KRTAP9-7A8MTY7 169 aa8.76□□□□□ -1.01
HIF1A-211ENST00000557446 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
HIF1A-211ENST00000557446 ACYP2P14621 99 aa8.67□□□□□ -1.02
HIF1A-211ENST00000557446 A6NN06 94 aa8.64□□□□□ -1.03
HIF1A-211ENST00000557446 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
HIF1A-211ENST00000557446 MACF1Q9UPN3 7388 aaKnown RBP8.62□□□□□ -1.03
HIF1A-211ENST00000557446 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
HIF1A-211ENST00000557446 P0C880 135 aa8.6□□□□□ -1.03
HIF1A-211ENST00000557446 KRTAP10-5P60370 271 aa8.57□□□□□ -1.04
HIF1A-211ENST00000557446 CHKB-CPT1BH3BT56 60 aa8.54□□□□□ -1.04
HIF1A-211ENST00000557446 SPANXA2-OT1Q8N9U9 137 aa8.54□□□□□ -1.04
HIF1A-211ENST00000557446 SPTSSBQ8NFR3 76 aa8.54□□□□□ -1.04
HIF1A-211ENST00000557446 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
HIF1A-211ENST00000557446 R4GN34 69 aa8.54□□□□□ -1.04
HIF1A-211ENST00000557446 M0QZ58 72 aa8.5□□□□□ -1.05
HIF1A-211ENST00000557446 SYNE2Q8WXH0 6885 aaKnown RBP8.43□□□□□ -1.06
HIF1A-211ENST00000557446 COX7CP15954 63 aa8.42□□□□□ -1.06
HIF1A-211ENST00000557446 KRTAP6-3Q3LI67 103 aa8.39□□□□□ -1.07
HIF1A-211ENST00000557446 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
HIF1A-211ENST00000557446 LINC01554Q52M75 96 aa8.36□□□□□ -1.07
HIF1A-211ENST00000557446 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
HIF1A-211ENST00000557446 COA5Q86WW8 74 aa8.31□□□□□ -1.08
HIF1A-211ENST00000557446 MT1XP80297 61 aa8.3□□□□□ -1.08
HIF1A-211ENST00000557446 CYSTM1Q9H1C7 97 aa8.28□□□□□ -1.08
HIF1A-211ENST00000557446 H7BZZ5 65 aa8.26□□□□□ -1.09
HIF1A-211ENST00000557446 ANAPC13Q9BS18 74 aa8.23□□□□□ -1.09
HIF1A-211ENST00000557446 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
HIF1A-211ENST00000557446 KRTAP5-9P26371 169 aa8.09□□□□□ -1.11
HIF1A-211ENST00000557446 SEC61GP60059 68 aa8.08□□□□□ -1.12
HIF1A-211ENST00000557446 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
HIF1A-211ENST00000557446 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
HIF1A-211ENST00000557446 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
HIF1A-211ENST00000557446 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
HIF1A-211ENST00000557446 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-211ENST00000557446 MUC12Q9UKN1 5478 aa7.93□□□□□ -1.14
HIF1A-211ENST00000557446 KMT2DO14686 5537 aa7.92□□□□□ -1.14
HIF1A-211ENST00000557446 SPRR2FQ96RM1 72 aa7.92□□□□□ -1.14
HIF1A-211ENST00000557446 A0A1B0GU33 70 aa7.91□□□□□ -1.14
HIF1A-211ENST00000557446 ATP5EP56381 51 aaPredicted RBP7.91□□□□□ -1.14
HIF1A-211ENST00000557446 SPATA8Q6RVD6 105 aa7.91□□□□□ -1.14
HIF1A-211ENST00000557446 NEBP20929 6669 aa7.9□□□□□ -1.14
HIF1A-211ENST00000557446 A0A0D9SG42 100 aa7.89□□□□□ -1.15
HIF1A-211ENST00000557446 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
HIF1A-211ENST00000557446 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
HIF1A-211ENST00000557446 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
HIF1A-211ENST00000557446 A0A1B0GU69 56 aa7.88□□□□□ -1.15
HIF1A-211ENST00000557446 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
HIF1A-211ENST00000557446 SPINT4Q6UDR6 99 aa7.77□□□□□ -1.17
HIF1A-211ENST00000557446 SPRR2EP22531 72 aa7.76□□□□□ -1.17
HIF1A-211ENST00000557446 SPRR2BP35325 72 aa7.76□□□□□ -1.17
HIF1A-211ENST00000557446 SPRR2AP35326 72 aa7.76□□□□□ -1.17
HIF1A-211ENST00000557446 TMEM258P61165 79 aa7.76□□□□□ -1.17
HIF1A-211ENST00000557446 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
HIF1A-211ENST00000557446 MDN1Q9NU22 5596 aa7.7□□□□□ -1.18
HIF1A-211ENST00000557446 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
HIF1A-211ENST00000557446 KRTAP20-1Q3LI63 56 aa7.7□□□□□ -1.18
HIF1A-211ENST00000557446 PRR15LQ9BU68 103 aa7.69□□□□□ -1.18
HIF1A-211ENST00000557446 LCE1AQ5T7P2 110 aa7.67□□□□□ -1.18
HIF1A-211ENST00000557446 A8MU10 97 aa7.66□□□□□ -1.18
HIF1A-211ENST00000557446 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
HIF1A-211ENST00000557446 KRTAP2-3P0C7H8 128 aa7.53□□□□□ -1.2
HIF1A-211ENST00000557446 KRTAP2-4Q9BYR9 128 aa7.53□□□□□ -1.2
HIF1A-211ENST00000557446 SPRR2DP22532 72 aa7.5□□□□□ -1.21
HIF1A-211ENST00000557446 UQCR11O14957 56 aa7.43□□□□□ -1.22
HIF1A-211ENST00000557446 KRTAP19-7Q3SYF9 63 aa7.42□□□□□ -1.22
HIF1A-211ENST00000557446 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
HIF1A-211ENST00000557446 MT1EP04732 61 aa7.35□□□□□ -1.23
HIF1A-211ENST00000557446 TNP1P09430 55 aa7.32□□□□□ -1.24
HIF1A-211ENST00000557446 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
HIF1A-211ENST00000557446 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
HIF1A-211ENST00000557446 V9GYY9 64 aa7.3□□□□□ -1.24
HIF1A-211ENST00000557446 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
HIF1A-211ENST00000557446 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
HIF1A-211ENST00000557446 LCE3BQ5TA77 95 aa7.27□□□□□ -1.25
HIF1A-211ENST00000557446 PSPHP1O15172 72 aa7.26□□□□□ -1.25
HIF1A-211ENST00000557446 Q1T7F1 81 aa7.25□□□□□ -1.25
HIF1A-211ENST00000557446 KRTAP19-3Q7Z4W3 81 aa7.25□□□□□ -1.25
HIF1A-211ENST00000557446 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
HIF1A-211ENST00000557446 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
HIF1A-211ENST00000557446 PCP4P48539 62 aa7.17□□□□□ -1.26
HIF1A-211ENST00000557446 K7ERS5 55 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms