RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 IMUPQ9GZP8 106 aa6.92□□□□□ -1.3
TUBB3-213ENST00000557262 TRAV22A0A0B4J277 110 aa6.91□□□□□ -1.3
TUBB3-213ENST00000557262 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
TUBB3-213ENST00000557262 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
TUBB3-213ENST00000557262 KMT2DO14686 5537 aa6.86□□□□□ -1.31
TUBB3-213ENST00000557262 NDUFC1O43677 76 aa6.86□□□□□ -1.31
TUBB3-213ENST00000557262 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
TUBB3-213ENST00000557262 H0YAA0 97 aa6.84□□□□□ -1.31
TUBB3-213ENST00000557262 UQCRQO14949 82 aa6.81□□□□□ -1.32
TUBB3-213ENST00000557262 ACYP1P07311 99 aa6.8□□□□□ -1.32
TUBB3-213ENST00000557262 ATOX1O00244 68 aa6.79□□□□□ -1.32
TUBB3-213ENST00000557262 H0Y9P7 68 aa6.78□□□□□ -1.32
TUBB3-213ENST00000557262 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
TUBB3-213ENST00000557262 A8MUN3 132 aa6.75□□□□□ -1.33
TUBB3-213ENST00000557262 ATP5EP2Q5VTU8 51 aa6.75□□□□□ -1.33
TUBB3-213ENST00000557262 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
TUBB3-213ENST00000557262 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
TUBB3-213ENST00000557262 FAM240AA0A1B0GVK7 77 aa6.71□□□□□ -1.34
TUBB3-213ENST00000557262 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
TUBB3-213ENST00000557262 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
TUBB3-213ENST00000557262 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
TUBB3-213ENST00000557262 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
TUBB3-213ENST00000557262 MT1XP80297 61 aa6.67□□□□□ -1.34
TUBB3-213ENST00000557262 LINC00208Q96KT6 92 aa6.67□□□□□ -1.34
TUBB3-213ENST00000557262 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
TUBB3-213ENST00000557262 SPRR2EP22531 72 aa6.62□□□□□ -1.35
TUBB3-213ENST00000557262 SPRR2BP35325 72 aa6.62□□□□□ -1.35
TUBB3-213ENST00000557262 SPRR2AP35326 72 aa6.62□□□□□ -1.35
TUBB3-213ENST00000557262 LINC00643Q86TS7 51 aa6.61□□□□□ -1.35
TUBB3-213ENST00000557262 R4GN34 69 aa6.61□□□□□ -1.35
TUBB3-213ENST00000557262 MP68P56378 58 aa6.6□□□□□ -1.35
TUBB3-213ENST00000557262 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
TUBB3-213ENST00000557262 P0C880 135 aa6.57□□□□□ -1.36
TUBB3-213ENST00000557262 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
TUBB3-213ENST00000557262 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
TUBB3-213ENST00000557262 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
TUBB3-213ENST00000557262 M0QZ58 72 aa6.53□□□□□ -1.36
TUBB3-213ENST00000557262 LCE1AQ5T7P2 110 aa6.51□□□□□ -1.37
TUBB3-213ENST00000557262 H3BPC8 53 aa6.49□□□□□ -1.37
TUBB3-213ENST00000557262 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
TUBB3-213ENST00000557262 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
TUBB3-213ENST00000557262 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
TUBB3-213ENST00000557262 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
TUBB3-213ENST00000557262 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
TUBB3-213ENST00000557262 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
TUBB3-213ENST00000557262 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
TUBB3-213ENST00000557262 SPRR2DP22532 72 aa6.4□□□□□ -1.38
TUBB3-213ENST00000557262 SCGB1A1P11684 91 aa6.38□□□□□ -1.39
TUBB3-213ENST00000557262 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
TUBB3-213ENST00000557262 TRAV7A0A075B6U4 112 aa6.35□□□□□ -1.39
TUBB3-213ENST00000557262 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
TUBB3-213ENST00000557262 ACYP2P14621 99 aa6.31□□□□□ -1.4
TUBB3-213ENST00000557262 A0A1B0GV90 55 aa6.29□□□□□ -1.4
TUBB3-213ENST00000557262 MT-ATP8P03928 68 aa6.29□□□□□ -1.4
TUBB3-213ENST00000557262 J3QR89 54 aa6.28□□□□□ -1.4
TUBB3-213ENST00000557262 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
TUBB3-213ENST00000557262 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
TUBB3-213ENST00000557262 CHKB-CPT1BH3BT56 60 aa6.17□□□□□ -1.42
TUBB3-213ENST00000557262 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.42
TUBB3-213ENST00000557262 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
TUBB3-213ENST00000557262 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
TUBB3-213ENST00000557262 SNURFQ9Y675 71 aa6.03□□□□□ -1.44
TUBB3-213ENST00000557262 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
TUBB3-213ENST00000557262 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
TUBB3-213ENST00000557262 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
TUBB3-213ENST00000557262 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
TUBB3-213ENST00000557262 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
TUBB3-213ENST00000557262 K7ERU9 68 aa5.93□□□□□ -1.46
TUBB3-213ENST00000557262 MT1EP04732 61 aa5.92□□□□□ -1.46
TUBB3-213ENST00000557262 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
TUBB3-213ENST00000557262 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
TUBB3-213ENST00000557262 A0A0D9SG42 100 aa5.85□□□□□ -1.47
TUBB3-213ENST00000557262 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
TUBB3-213ENST00000557262 SEC61GP60059 68 aa5.84□□□□□ -1.47
TUBB3-213ENST00000557262 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.47
TUBB3-213ENST00000557262 COA5Q86WW8 74 aa5.83□□□□□ -1.48
TUBB3-213ENST00000557262 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
TUBB3-213ENST00000557262 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
TUBB3-213ENST00000557262 MT1GP13640 62 aa5.79□□□□□ -1.48
TUBB3-213ENST00000557262 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
TUBB3-213ENST00000557262 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
TUBB3-213ENST00000557262 A0A1B0GU33 70 aa5.76□□□□□ -1.49
TUBB3-213ENST00000557262 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
TUBB3-213ENST00000557262 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
TUBB3-213ENST00000557262 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
TUBB3-213ENST00000557262 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
TUBB3-213ENST00000557262 MT1MQ8N339 61 aa5.65□□□□□ -1.5
TUBB3-213ENST00000557262 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
TUBB3-213ENST00000557262 MT1LQ93083 61 aa5.63□□□□□ -1.51
TUBB3-213ENST00000557262 MT4P47944 62 aa5.62□□□□□ -1.51
TUBB3-213ENST00000557262 COX7CP15954 63 aa5.61□□□□□ -1.51
TUBB3-213ENST00000557262 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
TUBB3-213ENST00000557262 H7BZZ5 65 aa5.57□□□□□ -1.52
TUBB3-213ENST00000557262 A0A1B0GU69 56 aa5.55□□□□□ -1.52
TUBB3-213ENST00000557262 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
TUBB3-213ENST00000557262 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
TUBB3-213ENST00000557262 A8MU10 97 aa5.53□□□□□ -1.52
TUBB3-213ENST00000557262 TNP1P09430 55 aa5.53□□□□□ -1.52
TUBB3-213ENST00000557262 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
TUBB3-213ENST00000557262 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms