RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 LRBAP50851 2863 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 DEFB135Q30KP9 77 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 ZANQ9Y493 2812 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 RELNP78509 3460 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 ABCA12Q86UK0 2595 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 ASPMQ8IZT6 3477 aa0.61□□□□□ -2.31
PTPN21-209ENST00000557249 SONP18583 2426 aaKnown RBP0.6□□□□□ -2.31
PTPN21-209ENST00000557249 CHD6Q8TD26 2715 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 FLNAP21333 2647 aaKnown RBP0.6□□□□□ -2.31
PTPN21-209ENST00000557249 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 MTORP42345 2549 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 DEFB4AO15263 64 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 HTN3P15516 51 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 ACANP16112 2415 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
PTPN21-209ENST00000557249 UTP20O75691 2785 aaKnown RBP0.6□□□□□ -2.31
PTPN21-209ENST00000557249 CELSR2Q9HCU4 2923 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 NSD1Q96L73 2696 aaPredicted RBP0.6□□□□□ -2.31
PTPN21-209ENST00000557249 NIPBLQ6KC79 2804 aaeCLIP0.6□□□□□ -2.31
PTPN21-209ENST00000557249 SVEP1Q4LDE5 3571 aa0.6□□□□□ -2.31
PTPN21-209ENST00000557249 LAMA5O15230 3695 aa0.59□□□□□ -2.31
PTPN21-209ENST00000557249 CSMD1Q96PZ7 3565 aa0.59□□□□□ -2.31
PTPN21-209ENST00000557249 M0QZ58 72 aa0.59□□□□□ -2.31
PTPN21-209ENST00000557249 SMR3AQ99954 134 aa0.59□□□□□ -2.31
PTPN21-209ENST00000557249 MAP1AP78559 2803 aaPredicted RBP0.59□□□□□ -2.32
PTPN21-209ENST00000557249 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
PTPN21-209ENST00000557249 TEP1Q99973 2627 aaKnown RBP0.58□□□□□ -2.32
PTPN21-209ENST00000557249 NF1P21359 2839 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 FASNP49327 2511 aaKnown RBP0.58□□□□□ -2.32
PTPN21-209ENST00000557249 HIVEP1P15822 2718 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 CENPEQ02224 2701 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 KRTAP5-10Q6L8G5 202 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 VWFP04275 2813 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 GCN1Q92616 2671 aaKnown RBP0.58□□□□□ -2.32
PTPN21-209ENST00000557249 TENM3Q9P273 2699 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 ITPR2Q14571 2701 aa0.58□□□□□ -2.32
PTPN21-209ENST00000557249 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
PTPN21-209ENST00000557249 RPS29P62273 56 aaKnown RBP0.57□□□□□ -2.32
PTPN21-209ENST00000557249 NBEAL2Q6ZNJ1 2754 aa0.57□□□□□ -2.32
PTPN21-209ENST00000557249 CSMD2Q7Z408 3487 aa0.57□□□□□ -2.32
PTPN21-209ENST00000557249 MAST4O15021 2626 aa0.57□□□□□ -2.32
PTPN21-209ENST00000557249 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
PTPN21-209ENST00000557249 ATRQ13535 2644 aa0.57□□□□□ -2.32
PTPN21-209ENST00000557249 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
PTPN21-209ENST00000557249 F8P00451 2351 aa0.56□□□□□ -2.32
PTPN21-209ENST00000557249 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
PTPN21-209ENST00000557249 AKAP9Q99996 3911 aa0.56□□□□□ -2.32
PTPN21-209ENST00000557249 CRYBG3Q68DQ2 2970 aa0.56□□□□□ -2.32
PTPN21-209ENST00000557249 ANK3Q12955 4377 aaKnown RBP0.56□□□□□ -2.32
PTPN21-209ENST00000557249 STAB2Q8WWQ8 2551 aa0.56□□□□□ -2.32
PTPN21-209ENST00000557249 HECTD1Q9ULT8 2610 aa0.55□□□□□ -2.32
PTPN21-209ENST00000557249 VPS13CQ709C8 3753 aa0.55□□□□□ -2.32
PTPN21-209ENST00000557249 DNAH3Q8TD57 4116 aa0.55□□□□□ -2.32
PTPN21-209ENST00000557249 KRTAP19-3Q7Z4W3 81 aa0.55□□□□□ -2.32
PTPN21-209ENST00000557249 NBEAL1Q6ZS30 2694 aa0.55□□□□□ -2.32
PTPN21-209ENST00000557249 MGAM2Q2M2H8 2515 aa0.55□□□□□ -2.32
PTPN21-209ENST00000557249 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 C9orf92A6NGG3 77 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 TNP1P09430 55 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 PKD1L1Q8TDX9 2849 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 DNAH1Q9P2D7 4330 aa0.54□□□□□ -2.32
PTPN21-209ENST00000557249 TRRAPQ9Y4A5 3859 aa0.53□□□□□ -2.32
PTPN21-209ENST00000557249 CUBNO60494 3623 aa0.53□□□□□ -2.32
PTPN21-209ENST00000557249 ANK2Q01484 3957 aa0.53□□□□□ -2.32
PTPN21-209ENST00000557249 VPS13DQ5THJ4 4388 aa0.53□□□□□ -2.32
PTPN21-209ENST00000557249 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
PTPN21-209ENST00000557249 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
PTPN21-209ENST00000557249 DYNC2H1Q8NCM8 4307 aaKnown RBP0.52□□□□□ -2.33
PTPN21-209ENST00000557249 DMBT1Q9UGM3 2413 aaPredicted RBP0.52□□□□□ -2.33
PTPN21-209ENST00000557249 HUWE1Q7Z6Z7 4374 aaKnown RBP0.51□□□□□ -2.33
PTPN21-209ENST00000557249 DNAH6Q9C0G6 4158 aa0.51□□□□□ -2.33
PTPN21-209ENST00000557249 COL7A1Q02388 2944 aa0.51□□□□□ -2.33
PTPN21-209ENST00000557249 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
PTPN21-209ENST00000557249 CMYA5Q8N3K9 4069 aa0.5□□□□□ -2.33
PTPN21-209ENST00000557249 M0R2T5 61 aa0.5□□□□□ -2.33
PTPN21-209ENST00000557249 PRKDCP78527 4128 aaKnown RBP0.5□□□□□ -2.33
PTPN21-209ENST00000557249 DNAH7Q8WXX0 4024 aa0.5□□□□□ -2.33
PTPN21-209ENST00000557249 DNAH10Q8IVF4 4471 aa0.49□□□□□ -2.33
PTPN21-209ENST00000557249 MT1HL1P0DM35 61 aa0.49□□□□□ -2.33
PTPN21-209ENST00000557249 CSMD3Q7Z407 3707 aa0.49□□□□□ -2.33
PTPN21-209ENST00000557249 TGP01266 2768 aa0.49□□□□□ -2.33
PTPN21-209ENST00000557249 LYSTQ99698 3801 aa0.49□□□□□ -2.33
PTPN21-209ENST00000557249 DNAH17Q9UFH2 4485 aa0.48□□□□□ -2.33
PTPN21-209ENST00000557249 DNAH9Q9NYC9 4486 aa0.48□□□□□ -2.33
PTPN21-209ENST00000557249 KRTAP19-2Q3LHN2 52 aa0.48□□□□□ -2.33
PTPN21-209ENST00000557249 KRTAP8-1Q8IUC2 63 aa0.48□□□□□ -2.33
PTPN21-209ENST00000557249 PKHD1L1Q86WI1 4243 aa0.48□□□□□ -2.33
PTPN21-209ENST00000557249 HECTD4Q9Y4D8 3996 aa0.48□□□□□ -2.33
PTPN21-209ENST00000557249 SMR3BP02814 79 aaPredicted RBP0.47□□□□□ -2.33
PTPN21-209ENST00000557249 PRM1P04553 51 aa0.47□□□□□ -2.33
PTPN21-209ENST00000557249 KMT2AQ03164 3969 aa0.47□□□□□ -2.33
PTPN21-209ENST00000557249 PKHD1P08F94 4074 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms