RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 Q5VV11 94 aa8.28□□□□□ -1.08
NEDD1-209ENST00000557092 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
NEDD1-209ENST00000557092 SYNE2Q8WXH0 6885 aaKnown RBP8.26□□□□□ -1.09
NEDD1-209ENST00000557092 MT1BP07438 61 aa8.25□□□□□ -1.09
NEDD1-209ENST00000557092 A0A1B0GV90 55 aa8.23□□□□□ -1.09
NEDD1-209ENST00000557092 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
NEDD1-209ENST00000557092 A6NN06 94 aa8.2□□□□□ -1.1
NEDD1-209ENST00000557092 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
NEDD1-209ENST00000557092 NDUFC1O43677 76 aa8.19□□□□□ -1.1
NEDD1-209ENST00000557092 IMUPQ9GZP8 106 aa8.18□□□□□ -1.1
NEDD1-209ENST00000557092 MP68P56378 58 aa8.16□□□□□ -1.1
NEDD1-209ENST00000557092 A8MUN3 132 aa8.15□□□□□ -1.1
NEDD1-209ENST00000557092 CRIPTQ9P021 101 aa8.15□□□□□ -1.1
NEDD1-209ENST00000557092 KRTAP6-3Q3LI67 103 aa8.14□□□□□ -1.11
NEDD1-209ENST00000557092 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
NEDD1-209ENST00000557092 H0YAA0 97 aa8.09□□□□□ -1.11
NEDD1-209ENST00000557092 J3QR89 54 aa8.09□□□□□ -1.11
NEDD1-209ENST00000557092 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
NEDD1-209ENST00000557092 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
NEDD1-209ENST00000557092 H3BPC8 53 aa8□□□□□ -1.13
NEDD1-209ENST00000557092 SCGB1A1P11684 91 aa8□□□□□ -1.13
NEDD1-209ENST00000557092 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
NEDD1-209ENST00000557092 LOC100996750A0A140TA64 210 aa7.86□□□□□ -1.15
NEDD1-209ENST00000557092 C20orf197Q8N268 126 aa7.86□□□□□ -1.15
NEDD1-209ENST00000557092 KRTAP4-6Q9BYQ5 205 aa7.86□□□□□ -1.15
NEDD1-209ENST00000557092 P0C880 135 aa7.84□□□□□ -1.15
NEDD1-209ENST00000557092 R4GN34 69 aa7.84□□□□□ -1.15
NEDD1-209ENST00000557092 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
NEDD1-209ENST00000557092 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
NEDD1-209ENST00000557092 M0QZ58 72 aa7.79□□□□□ -1.16
NEDD1-209ENST00000557092 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
NEDD1-209ENST00000557092 MUC12Q9UKN1 5478 aa7.78□□□□□ -1.16
NEDD1-209ENST00000557092 NEBP20929 6669 aa7.77□□□□□ -1.17
NEDD1-209ENST00000557092 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
NEDD1-209ENST00000557092 K7ERU9 68 aa7.75□□□□□ -1.17
NEDD1-209ENST00000557092 SMIM20Q8N5G0 67 aa7.75□□□□□ -1.17
NEDD1-209ENST00000557092 ACYP2P14621 99 aa7.74□□□□□ -1.17
NEDD1-209ENST00000557092 KRTAP5-9P26371 169 aa7.74□□□□□ -1.17
NEDD1-209ENST00000557092 MT1XP80297 61 aa7.73□□□□□ -1.17
NEDD1-209ENST00000557092 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
NEDD1-209ENST00000557092 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
NEDD1-209ENST00000557092 KMT2DO14686 5537 aa7.64□□□□□ -1.19
NEDD1-209ENST00000557092 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
NEDD1-209ENST00000557092 SNURFQ9Y675 71 aa7.62□□□□□ -1.19
NEDD1-209ENST00000557092 H3BS24 57 aa7.6□□□□□ -1.19
NEDD1-209ENST00000557092 KRTAP20-1Q3LI63 56 aa7.58□□□□□ -1.2
NEDD1-209ENST00000557092 MDN1Q9NU22 5596 aa7.57□□□□□ -1.2
NEDD1-209ENST00000557092 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
NEDD1-209ENST00000557092 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
NEDD1-209ENST00000557092 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
NEDD1-209ENST00000557092 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
NEDD1-209ENST00000557092 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
NEDD1-209ENST00000557092 SPRR2EP22531 72 aa7.46□□□□□ -1.22
NEDD1-209ENST00000557092 SPRR2BP35325 72 aa7.46□□□□□ -1.22
NEDD1-209ENST00000557092 SPRR2AP35326 72 aa7.46□□□□□ -1.22
NEDD1-209ENST00000557092 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
NEDD1-209ENST00000557092 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
NEDD1-209ENST00000557092 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
NEDD1-209ENST00000557092 KRTAP2-3P0C7H8 128 aa7.35□□□□□ -1.23
NEDD1-209ENST00000557092 KRTAP2-4Q9BYR9 128 aa7.35□□□□□ -1.23
NEDD1-209ENST00000557092 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
NEDD1-209ENST00000557092 LCE1AQ5T7P2 110 aa7.32□□□□□ -1.24
NEDD1-209ENST00000557092 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
NEDD1-209ENST00000557092 COA5Q86WW8 74 aa7.31□□□□□ -1.24
NEDD1-209ENST00000557092 COX7CP15954 63 aa7.23□□□□□ -1.25
NEDD1-209ENST00000557092 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
NEDD1-209ENST00000557092 SPRR2DP22532 72 aa7.21□□□□□ -1.26
NEDD1-209ENST00000557092 SEC61GP60059 68 aa7.21□□□□□ -1.26
NEDD1-209ENST00000557092 SERP1Q9Y6X1 66 aa7.2□□□□□ -1.26
NEDD1-209ENST00000557092 A0A0D9SG42 100 aa7.13□□□□□ -1.27
NEDD1-209ENST00000557092 H7BZZ5 65 aa7.12□□□□□ -1.27
NEDD1-209ENST00000557092 KRTAP2-2Q9BYT5 123 aa7.12□□□□□ -1.27
NEDD1-209ENST00000557092 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
NEDD1-209ENST00000557092 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
NEDD1-209ENST00000557092 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
NEDD1-209ENST00000557092 A0A1B0GU33 70 aa7.06□□□□□ -1.28
NEDD1-209ENST00000557092 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
NEDD1-209ENST00000557092 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
NEDD1-209ENST00000557092 ANAPC13Q9BS18 74 aa6.98□□□□□ -1.29
NEDD1-209ENST00000557092 A0A1B0GU69 56 aa6.95□□□□□ -1.3
NEDD1-209ENST00000557092 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
NEDD1-209ENST00000557092 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.3
NEDD1-209ENST00000557092 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
NEDD1-209ENST00000557092 KRTAP4-12Q9BQ66 201 aa6.87□□□□□ -1.31
NEDD1-209ENST00000557092 MT1EP04732 61 aa6.86□□□□□ -1.31
NEDD1-209ENST00000557092 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
NEDD1-209ENST00000557092 A8MU10 97 aa6.82□□□□□ -1.32
NEDD1-209ENST00000557092 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
NEDD1-209ENST00000557092 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
NEDD1-209ENST00000557092 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
NEDD1-209ENST00000557092 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
NEDD1-209ENST00000557092 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
NEDD1-209ENST00000557092 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
NEDD1-209ENST00000557092 KRTAP9-9Q9BYP9 154 aa6.7□□□□□ -1.34
NEDD1-209ENST00000557092 KRTAP9-4Q9BYQ2 154 aa6.7□□□□□ -1.34
NEDD1-209ENST00000557092 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
NEDD1-209ENST00000557092 TNP1P09430 55 aa6.64□□□□□ -1.35
NEDD1-209ENST00000557092 MT1GP13640 62 aa6.64□□□□□ -1.35
NEDD1-209ENST00000557092 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
NEDD1-209ENST00000557092 LINC01558Q9Y6Z2 57 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms