RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 LOC101927531A0A1B0GV80 90 aa9.91□□□□□ -0.82
ACTN1-220ENST00000556433 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
ACTN1-220ENST00000556433 KRTAP20-1Q3LI63 56 aa9.89□□□□□ -0.83
ACTN1-220ENST00000556433 IMUPQ9GZP8 106 aa9.85□□□□□ -0.83
ACTN1-220ENST00000556433 NDUFC1O43677 76 aa9.79□□□□□ -0.84
ACTN1-220ENST00000556433 UQCRQO14949 82 aa9.77□□□□□ -0.85
ACTN1-220ENST00000556433 ACYP1P07311 99 aa9.77□□□□□ -0.85
ACTN1-220ENST00000556433 KRTAP5-9P26371 169 aa9.77□□□□□ -0.85
ACTN1-220ENST00000556433 H0Y9P7 68 aa9.75□□□□□ -0.85
ACTN1-220ENST00000556433 HIST1H4AP62805 103 aaKnown RBP9.75□□□□□ -0.85
ACTN1-220ENST00000556433 H0YAA0 97 aa9.73□□□□□ -0.85
ACTN1-220ENST00000556433 ATOX1O00244 68 aa9.73□□□□□ -0.85
ACTN1-220ENST00000556433 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
ACTN1-220ENST00000556433 KMT2DO14686 5537 aa9.69□□□□□ -0.86
ACTN1-220ENST00000556433 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
ACTN1-220ENST00000556433 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
ACTN1-220ENST00000556433 A8MUN3 132 aa9.64□□□□□ -0.87
ACTN1-220ENST00000556433 MDN1Q9NU22 5596 aa9.63□□□□□ -0.87
ACTN1-220ENST00000556433 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
ACTN1-220ENST00000556433 PRO2289Q9P1D8 64 aa9.54□□□□□ -0.88
ACTN1-220ENST00000556433 LINC00643Q86TS7 51 aa9.52□□□□□ -0.89
ACTN1-220ENST00000556433 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
ACTN1-220ENST00000556433 MP68P56378 58 aa9.49□□□□□ -0.89
ACTN1-220ENST00000556433 MT1XP80297 61 aa9.49□□□□□ -0.89
ACTN1-220ENST00000556433 A0A1B0GV90 55 aa9.48□□□□□ -0.89
ACTN1-220ENST00000556433 KRTAP2-3P0C7H8 128 aa9.47□□□□□ -0.89
ACTN1-220ENST00000556433 KRTAP2-4Q9BYR9 128 aa9.47□□□□□ -0.89
ACTN1-220ENST00000556433 SPRR2FQ96RM1 72 aa9.46□□□□□ -0.9
ACTN1-220ENST00000556433 OCR1Q9BZK8 76 aa9.45□□□□□ -0.9
ACTN1-220ENST00000556433 R4GN34 69 aa9.43□□□□□ -0.9
ACTN1-220ENST00000556433 P0C880 135 aa9.4□□□□□ -0.9
ACTN1-220ENST00000556433 SPRR2EP22531 72 aa9.38□□□□□ -0.91
ACTN1-220ENST00000556433 SPRR2BP35325 72 aa9.38□□□□□ -0.91
ACTN1-220ENST00000556433 SPRR2AP35326 72 aa9.38□□□□□ -0.91
ACTN1-220ENST00000556433 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
ACTN1-220ENST00000556433 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
ACTN1-220ENST00000556433 M0QZ58 72 aa9.34□□□□□ -0.91
ACTN1-220ENST00000556433 H3BPC8 53 aa9.3□□□□□ -0.92
ACTN1-220ENST00000556433 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
ACTN1-220ENST00000556433 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
ACTN1-220ENST00000556433 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
ACTN1-220ENST00000556433 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
ACTN1-220ENST00000556433 LCE1AQ5T7P2 110 aa9.21□□□□□ -0.94
ACTN1-220ENST00000556433 J3QR89 54 aa9.2□□□□□ -0.94
ACTN1-220ENST00000556433 SCGB1A1P11684 91 aa9.2□□□□□ -0.94
ACTN1-220ENST00000556433 KRTAP4-8A0A0G2JLE6 195 aa9.18□□□□□ -0.94
ACTN1-220ENST00000556433 KRTAP4-8Q9BYQ9 185 aa9.18□□□□□ -0.94
ACTN1-220ENST00000556433 KRTAP2-2Q9BYT5 123 aa9.14□□□□□ -0.95
ACTN1-220ENST00000556433 KRTAP2-1Q9BYU5 128 aa9.14□□□□□ -0.95
ACTN1-220ENST00000556433 TRAV7A0A075B6U4 112 aa9.09□□□□□ -0.95
ACTN1-220ENST00000556433 SPRR2DP22532 72 aa9.06□□□□□ -0.96
ACTN1-220ENST00000556433 KRTAP10-7P60409 375 aaPredicted RBP9.06□□□□□ -0.96
ACTN1-220ENST00000556433 ACYP2P14621 99 aa9.05□□□□□ -0.96
ACTN1-220ENST00000556433 MT-ATP8P03928 68 aa9.01□□□□□ -0.97
ACTN1-220ENST00000556433 KRTAP10-12P60413 245 aa9.01□□□□□ -0.97
ACTN1-220ENST00000556433 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
ACTN1-220ENST00000556433 K7ERU9 68 aa8.95□□□□□ -0.98
ACTN1-220ENST00000556433 CHKB-CPT1BH3BT56 60 aa8.88□□□□□ -0.99
ACTN1-220ENST00000556433 LCE3BQ5TA77 95 aa8.84□□□□□ -0.99
ACTN1-220ENST00000556433 SMIM20Q8N5G0 67 aa8.84□□□□□ -0.99
ACTN1-220ENST00000556433 SNURFQ9Y675 71 aa8.73□□□□□ -1.01
ACTN1-220ENST00000556433 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
ACTN1-220ENST00000556433 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.02
ACTN1-220ENST00000556433 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
ACTN1-220ENST00000556433 GPR98Q8WXG9 6306 aa8.52□□□□□ -1.05
ACTN1-220ENST00000556433 KRTAP19-7Q3SYF9 63 aa8.49□□□□□ -1.05
ACTN1-220ENST00000556433 LCE5AQ5TCM9 118 aa8.46□□□□□ -1.06
ACTN1-220ENST00000556433 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
ACTN1-220ENST00000556433 DSTQ03001 7570 aaKnown RBP8.43□□□□□ -1.06
ACTN1-220ENST00000556433 MT1EP04732 61 aa8.43□□□□□ -1.06
ACTN1-220ENST00000556433 A0A0D9SG42 100 aa8.42□□□□□ -1.06
ACTN1-220ENST00000556433 KRTAP19-3Q7Z4W3 81 aa8.41□□□□□ -1.06
ACTN1-220ENST00000556433 COA5Q86WW8 74 aa8.41□□□□□ -1.06
ACTN1-220ENST00000556433 SEC61GP60059 68 aa8.39□□□□□ -1.07
ACTN1-220ENST00000556433 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
ACTN1-220ENST00000556433 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
ACTN1-220ENST00000556433 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
ACTN1-220ENST00000556433 KRTAP4-9Q9BYQ8 210 aa8.3□□□□□ -1.08
ACTN1-220ENST00000556433 A0A1B0GU33 70 aa8.27□□□□□ -1.09
ACTN1-220ENST00000556433 COX7CP15954 63 aa8.26□□□□□ -1.09
ACTN1-220ENST00000556433 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
ACTN1-220ENST00000556433 CYSTM1Q9H1C7 97 aa8.23□□□□□ -1.09
ACTN1-220ENST00000556433 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
ACTN1-220ENST00000556433 MT1GP13640 62 aa8.19□□□□□ -1.1
ACTN1-220ENST00000556433 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
ACTN1-220ENST00000556433 H7BZZ5 65 aa8.08□□□□□ -1.12
ACTN1-220ENST00000556433 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
ACTN1-220ENST00000556433 LCE1DQ5T752 114 aa8.06□□□□□ -1.12
ACTN1-220ENST00000556433 MT1MQ8N339 61 aa8.04□□□□□ -1.12
ACTN1-220ENST00000556433 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
ACTN1-220ENST00000556433 MT1LQ93083 61 aa8.02□□□□□ -1.13
ACTN1-220ENST00000556433 A0A1B0GU69 56 aa8.01□□□□□ -1.13
ACTN1-220ENST00000556433 LCE4AQ5TA78 99 aa7.99□□□□□ -1.13
ACTN1-220ENST00000556433 A8MU10 97 aa7.97□□□□□ -1.13
ACTN1-220ENST00000556433 MT4P47944 62 aa7.96□□□□□ -1.14
ACTN1-220ENST00000556433 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
ACTN1-220ENST00000556433 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
ACTN1-220ENST00000556433 CCDC179H3BU77 68 aa7.9□□□□□ -1.14
ACTN1-220ENST00000556433 TNP1P09430 55 aa7.9□□□□□ -1.14
ACTN1-220ENST00000556433 HMCN1Q96RW7 5635 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms