RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 LAMTOR3Q9UHA4 124 aa2.48□□□□□ -2.01
ATXN3-239ENST00000556315 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
ATXN3-239ENST00000556315 C1orf195Q5TG92 126 aa2.47□□□□□ -2.01
ATXN3-239ENST00000556315 ST20-AS1Q8NBB2 130 aa2.47□□□□□ -2.01
ATXN3-239ENST00000556315 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
ATXN3-239ENST00000556315 MT2AP02795 61 aa2.46□□□□□ -2.02
ATXN3-239ENST00000556315 SPRR1BP22528 89 aa2.46□□□□□ -2.02
ATXN3-239ENST00000556315 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.02
ATXN3-239ENST00000556315 C5orf47Q569G3 176 aa2.46□□□□□ -2.02
ATXN3-239ENST00000556315 ATP11AUNQ6ZP68 121 aa2.46□□□□□ -2.02
ATXN3-239ENST00000556315 Q6ZQY7 126 aa2.46□□□□□ -2.02
ATXN3-239ENST00000556315 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
ATXN3-239ENST00000556315 A0A087WVE0 104 aa2.45□□□□□ -2.02
ATXN3-239ENST00000556315 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
ATXN3-239ENST00000556315 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
ATXN3-239ENST00000556315 IGLV5-48A0A075B6I7 105 aa2.44□□□□□ -2.02
ATXN3-239ENST00000556315 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
ATXN3-239ENST00000556315 MT1FP04733 61 aa2.44□□□□□ -2.02
ATXN3-239ENST00000556315 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
ATXN3-239ENST00000556315 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
ATXN3-239ENST00000556315 NREPQ16612 68 aa2.44□□□□□ -2.02
ATXN3-239ENST00000556315 H7BZZ5 65 aa2.43□□□□□ -2.02
ATXN3-239ENST00000556315 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
ATXN3-239ENST00000556315 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
ATXN3-239ENST00000556315 BPY2O14599 106 aa2.42□□□□□ -2.02
ATXN3-239ENST00000556315 TMEM254Q8TBM7 123 aa2.41□□□□□ -2.02
ATXN3-239ENST00000556315 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
ATXN3-239ENST00000556315 DEFB105AQ8NG35 78 aa2.4□□□□□ -2.03
ATXN3-239ENST00000556315 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
ATXN3-239ENST00000556315 NDUFB1O75438 58 aa2.39□□□□□ -2.03
ATXN3-239ENST00000556315 IGKV4-1P06312 121 aa2.39□□□□□ -2.03
ATXN3-239ENST00000556315 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
ATXN3-239ENST00000556315 F8WEM9 126 aa2.38□□□□□ -2.03
ATXN3-239ENST00000556315 H3BPC8 53 aa2.38□□□□□ -2.03
ATXN3-239ENST00000556315 Q96NJ1 140 aa2.38□□□□□ -2.03
ATXN3-239ENST00000556315 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
ATXN3-239ENST00000556315 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
ATXN3-239ENST00000556315 NEBP20929 6669 aa2.37□□□□□ -2.03
ATXN3-239ENST00000556315 CYP4F30PQ9H0H9 118 aa2.36□□□□□ -2.03
ATXN3-239ENST00000556315 RBM12B-AS1Q9P1G2 102 aa2.36□□□□□ -2.03
ATXN3-239ENST00000556315 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
ATXN3-239ENST00000556315 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
ATXN3-239ENST00000556315 V9GYY9 64 aa2.36□□□□□ -2.03
ATXN3-239ENST00000556315 A8MUU9 505 aa2.35□□□□□ -2.03
ATXN3-239ENST00000556315 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
ATXN3-239ENST00000556315 C4orf26Q17RF5 130 aa2.35□□□□□ -2.03
ATXN3-239ENST00000556315 ZCCHC13Q8WW36 166 aaKnown RBP2.35□□□□□ -2.03
ATXN3-239ENST00000556315 hDV103S1A0JD37 113 aa2.34□□□□□ -2.03
ATXN3-239ENST00000556315 MP68P56378 58 aa2.34□□□□□ -2.03
ATXN3-239ENST00000556315 IGFL1Q6UW32 110 aa2.34□□□□□ -2.03
ATXN3-239ENST00000556315 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
ATXN3-239ENST00000556315 Q1T7F1 81 aa2.33□□□□□ -2.04
ATXN3-239ENST00000556315 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
ATXN3-239ENST00000556315 HRES1P13985 223 aa2.32□□□□□ -2.04
ATXN3-239ENST00000556315 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
ATXN3-239ENST00000556315 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
ATXN3-239ENST00000556315 Q8N9L7 120 aa2.32□□□□□ -2.04
ATXN3-239ENST00000556315 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
ATXN3-239ENST00000556315 A8MWP4 228 aa2.31□□□□□ -2.04
ATXN3-239ENST00000556315 K7EQZ3 153 aa2.31□□□□□ -2.04
ATXN3-239ENST00000556315 PRR15Q8IV56 129 aa2.31□□□□□ -2.04
ATXN3-239ENST00000556315 A0A087WSZ3 146 aa2.3□□□□□ -2.04
ATXN3-239ENST00000556315 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
ATXN3-239ENST00000556315 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
ATXN3-239ENST00000556315 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
ATXN3-239ENST00000556315 LINC00472Q9H8W2 130 aa2.3□□□□□ -2.04
ATXN3-239ENST00000556315 CASC2Q6XLA1 102 aa2.29□□□□□ -2.04
ATXN3-239ENST00000556315 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
ATXN3-239ENST00000556315 H0Y9P7 68 aa2.27□□□□□ -2.05
ATXN3-239ENST00000556315 CAMK2N1Q7Z7J9 78 aa2.27□□□□□ -2.05
ATXN3-239ENST00000556315 LINC00208Q96KT6 92 aa2.27□□□□□ -2.05
ATXN3-239ENST00000556315 MMP24-AS1A0A0U1RRL7 71 aa2.26□□□□□ -2.05
ATXN3-239ENST00000556315 A6NN06 94 aa2.26□□□□□ -2.05
ATXN3-239ENST00000556315 LINC00313P59037 77 aa2.26□□□□□ -2.05
ATXN3-239ENST00000556315 WFDC13Q8IUB5 93 aa2.26□□□□□ -2.05
ATXN3-239ENST00000556315 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
ATXN3-239ENST00000556315 KMT2DO14686 5537 aa2.25□□□□□ -2.05
ATXN3-239ENST00000556315 LOC101927531A0A1B0GV80 90 aa2.25□□□□□ -2.05
ATXN3-239ENST00000556315 A0A1B0GVX0 72 aa2.24□□□□□ -2.05
ATXN3-239ENST00000556315 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
ATXN3-239ENST00000556315 C8orf17Q9NRJ1 99 aa2.24□□□□□ -2.05
ATXN3-239ENST00000556315 SPINK7P58062 85 aa2.23□□□□□ -2.05
ATXN3-239ENST00000556315 MRPL34Q9BQ48 92 aaKnown RBP2.23□□□□□ -2.05
ATXN3-239ENST00000556315 DEFB116Q30KQ4 102 aa2.22□□□□□ -2.05
ATXN3-239ENST00000556315 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
ATXN3-239ENST00000556315 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
ATXN3-239ENST00000556315 Q5VV11 94 aa2.21□□□□□ -2.06
ATXN3-239ENST00000556315 COA5Q86WW8 74 aa2.21□□□□□ -2.06
ATXN3-239ENST00000556315 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
ATXN3-239ENST00000556315 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
ATXN3-239ENST00000556315 A8MUN3 132 aa2.2□□□□□ -2.06
ATXN3-239ENST00000556315 SEC61GP60059 68 aa2.2□□□□□ -2.06
ATXN3-239ENST00000556315 IGHV6-1A0A0B4J1U7 121 aa2.19□□□□□ -2.06
ATXN3-239ENST00000556315 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
ATXN3-239ENST00000556315 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATXN3-239ENST00000556315 NDUFS5O43920 106 aa2.19□□□□□ -2.06
ATXN3-239ENST00000556315 ACYP2P14621 99 aa2.19□□□□□ -2.06
ATXN3-239ENST00000556315 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
ATXN3-239ENST00000556315 MT1BP07438 61 aa2.18□□□□□ -2.06
ATXN3-239ENST00000556315 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms