RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
TGFB3-204ENST00000556285 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
TGFB3-204ENST00000556285 F8W1H4 67 aa5.9□□□□□ -1.46
TGFB3-204ENST00000556285 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
TGFB3-204ENST00000556285 KRTAP5-9P26371 169 aa5.89□□□□□ -1.47
TGFB3-204ENST00000556285 KMT2DO14686 5537 aa5.89□□□□□ -1.47
TGFB3-204ENST00000556285 KLKP1Q107X0 134 aa5.86□□□□□ -1.47
TGFB3-204ENST00000556285 UBL5Q9BZL1 73 aa5.85□□□□□ -1.47
TGFB3-204ENST00000556285 A0A087WVE0 104 aa5.83□□□□□ -1.48
TGFB3-204ENST00000556285 ETDBQ3ZM63 59 aa5.79□□□□□ -1.48
TGFB3-204ENST00000556285 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
TGFB3-204ENST00000556285 CYP4F30PQ9H0H9 118 aa5.77□□□□□ -1.49
TGFB3-204ENST00000556285 ACYP1P07311 99 aa5.73□□□□□ -1.49
TGFB3-204ENST00000556285 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
TGFB3-204ENST00000556285 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
TGFB3-204ENST00000556285 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
TGFB3-204ENST00000556285 A0A1B0GV90 55 aa5.7□□□□□ -1.5
TGFB3-204ENST00000556285 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
TGFB3-204ENST00000556285 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
TGFB3-204ENST00000556285 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
TGFB3-204ENST00000556285 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
TGFB3-204ENST00000556285 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
TGFB3-204ENST00000556285 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
TGFB3-204ENST00000556285 SEC61GP60059 68 aa5.65□□□□□ -1.5
TGFB3-204ENST00000556285 LOC101927531A0A1B0GV80 90 aa5.64□□□□□ -1.51
TGFB3-204ENST00000556285 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
TGFB3-204ENST00000556285 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
TGFB3-204ENST00000556285 SPRR2EP22531 72 aa5.62□□□□□ -1.51
TGFB3-204ENST00000556285 SPRR2BP35325 72 aa5.62□□□□□ -1.51
TGFB3-204ENST00000556285 SPRR2AP35326 72 aa5.62□□□□□ -1.51
TGFB3-204ENST00000556285 H0YAA0 97 aa5.61□□□□□ -1.51
TGFB3-204ENST00000556285 NDUFC1O43677 76 aa5.61□□□□□ -1.51
TGFB3-204ENST00000556285 ATP5EP2Q5VTU8 51 aa5.61□□□□□ -1.51
TGFB3-204ENST00000556285 MT1XP80297 61 aa5.6□□□□□ -1.51
TGFB3-204ENST00000556285 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
TGFB3-204ENST00000556285 J3QR89 54 aa5.59□□□□□ -1.51
TGFB3-204ENST00000556285 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
TGFB3-204ENST00000556285 H0Y9P7 68 aa5.57□□□□□ -1.52
TGFB3-204ENST00000556285 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
TGFB3-204ENST00000556285 A8MUN3 132 aa5.56□□□□□ -1.52
TGFB3-204ENST00000556285 UQCRQO14949 82 aa5.55□□□□□ -1.52
TGFB3-204ENST00000556285 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
TGFB3-204ENST00000556285 LCE1AQ5T7P2 110 aa5.54□□□□□ -1.52
TGFB3-204ENST00000556285 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
TGFB3-204ENST00000556285 HIST1H4AP62805 103 aaKnown RBP5.52□□□□□ -1.53
TGFB3-204ENST00000556285 ATOX1O00244 68 aa5.51□□□□□ -1.53
TGFB3-204ENST00000556285 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
TGFB3-204ENST00000556285 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
TGFB3-204ENST00000556285 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
TGFB3-204ENST00000556285 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
TGFB3-204ENST00000556285 P0C880 135 aa5.48□□□□□ -1.53
TGFB3-204ENST00000556285 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
TGFB3-204ENST00000556285 LINC00208Q96KT6 92 aa5.47□□□□□ -1.53
TGFB3-204ENST00000556285 K7ERU9 68 aa5.45□□□□□ -1.54
TGFB3-204ENST00000556285 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
TGFB3-204ENST00000556285 R4GN34 69 aa5.43□□□□□ -1.54
TGFB3-204ENST00000556285 SPRR2DP22532 72 aa5.42□□□□□ -1.54
TGFB3-204ENST00000556285 M0QZ58 72 aa5.4□□□□□ -1.54
TGFB3-204ENST00000556285 C20orf197Q8N268 126 aa5.39□□□□□ -1.55
TGFB3-204ENST00000556285 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
TGFB3-204ENST00000556285 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
TGFB3-204ENST00000556285 LINC01554Q52M75 96 aa5.36□□□□□ -1.55
TGFB3-204ENST00000556285 MP68P56378 58 aa5.35□□□□□ -1.55
TGFB3-204ENST00000556285 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
TGFB3-204ENST00000556285 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
TGFB3-204ENST00000556285 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
TGFB3-204ENST00000556285 DMAC1Q96GE9 116 aa5.31□□□□□ -1.56
TGFB3-204ENST00000556285 MT-ATP8P03928 68 aa5.3□□□□□ -1.56
TGFB3-204ENST00000556285 H3BPC8 53 aa5.29□□□□□ -1.56
TGFB3-204ENST00000556285 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
TGFB3-204ENST00000556285 SMIM20Q8N5G0 67 aa5.27□□□□□ -1.57
TGFB3-204ENST00000556285 TRAV7A0A075B6U4 112 aa5.21□□□□□ -1.58
TGFB3-204ENST00000556285 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
TGFB3-204ENST00000556285 ACYP2P14621 99 aa5.11□□□□□ -1.59
TGFB3-204ENST00000556285 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
TGFB3-204ENST00000556285 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
TGFB3-204ENST00000556285 SPTSSBQ8NFR3 76 aa5.1□□□□□ -1.59
TGFB3-204ENST00000556285 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
TGFB3-204ENST00000556285 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
TGFB3-204ENST00000556285 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
TGFB3-204ENST00000556285 SNURFQ9Y675 71 aa5.03□□□□□ -1.6
TGFB3-204ENST00000556285 CHKB-CPT1BH3BT56 60 aa5.02□□□□□ -1.61
TGFB3-204ENST00000556285 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
TGFB3-204ENST00000556285 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
TGFB3-204ENST00000556285 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TGFB3-204ENST00000556285 COX7CP15954 63 aa5□□□□□ -1.61
TGFB3-204ENST00000556285 MT1EP04732 61 aa4.97□□□□□ -1.61
TGFB3-204ENST00000556285 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
TGFB3-204ENST00000556285 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
TGFB3-204ENST00000556285 V9GYY9 64 aa4.94□□□□□ -1.62
TGFB3-204ENST00000556285 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
TGFB3-204ENST00000556285 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
TGFB3-204ENST00000556285 H7BZZ5 65 aa4.87□□□□□ -1.63
TGFB3-204ENST00000556285 A0A0D9SG42 100 aa4.85□□□□□ -1.63
TGFB3-204ENST00000556285 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
TGFB3-204ENST00000556285 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
TGFB3-204ENST00000556285 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
TGFB3-204ENST00000556285 MT4P47944 62 aa4.81□□□□□ -1.64
TGFB3-204ENST00000556285 COA5Q86WW8 74 aa4.81□□□□□ -1.64
TGFB3-204ENST00000556285 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms