RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029		A0A1B0GVY2	172 aa		6.55	□□□□□ -1.36
TMPO-212	ENST00000556029	VPS13B	Q7Z7G8	4022 aa		6.53	□□□□□ -1.36
TMPO-212	ENST00000556029	HYDIN	Q4G0P3	5121 aa		6.49	□□□□□ -1.37
TMPO-212	ENST00000556029	PKD1	P98161	4303 aa		6.48	□□□□□ -1.37
TMPO-212	ENST00000556029		H0YAA0	97 aa		6.46	□□□□□ -1.37
TMPO-212	ENST00000556029	FAT2	Q9NYQ8	4349 aa		6.46	□□□□□ -1.38
TMPO-212	ENST00000556029	KRTAP3-1	Q9BYR8	98 aa		6.45	□□□□□ -1.38
TMPO-212	ENST00000556029	KRTAP10-8	P60410	259 aa		6.41	□□□□□ -1.38
TMPO-212	ENST00000556029	XP32	Q5T750	250 aa		6.4	□□□□□ -1.38
TMPO-212	ENST00000556029	TNP1	P09430	55 aa		6.37	□□□□□ -1.39
TMPO-212	ENST00000556029	KRTAP10-4	P60372	401 aa	Predicted RBP	6.37	□□□□□ -1.39
TMPO-212	ENST00000556029		P0C880	135 aa		6.36	□□□□□ -1.39
TMPO-212	ENST00000556029	DYNC1H1	Q14204	4646 aa	Known RBP	6.35	□□□□□ -1.39
TMPO-212	ENST00000556029	PKHD1	P08F94	4074 aa		6.34	□□□□□ -1.39
TMPO-212	ENST00000556029	SACS	Q9NZJ4	4579 aa		6.34	□□□□□ -1.39
TMPO-212	ENST00000556029	FAT1	Q14517	4588 aa		6.33	□□□□□ -1.4
TMPO-212	ENST00000556029	APOB	P04114	4563 aa	Known RBP	6.19	□□□□□ -1.42
TMPO-212	ENST00000556029	TPRXL	Q17RH7	258 aa		6.18	□□□□□ -1.42
TMPO-212	ENST00000556029	KMT2C	Q8NEZ4	4911 aa	Known RBP	6.17	□□□□□ -1.42
TMPO-212	ENST00000556029	KRTAP4-5	Q9BYR2	181 aa		6.15	□□□□□ -1.42
TMPO-212	ENST00000556029	PKHD1L1	Q86WI1	4243 aa		6.15	□□□□□ -1.43
TMPO-212	ENST00000556029	KRTAP10-6	P60371	365 aa	Predicted RBP	6.15	□□□□□ -1.43
TMPO-212	ENST00000556029	KRTAP3-3	Q9BYR6	98 aa		6.15	□□□□□ -1.43
TMPO-212	ENST00000556029	KRTAP13-4	Q3LI77	160 aa		6.12	□□□□□ -1.43
TMPO-212	ENST00000556029	MT1HL1	P0DM35	61 aa		6.09	□□□□□ -1.43
TMPO-212	ENST00000556029	KRTAP3-2	Q9BYR7	98 aa		6.08	□□□□□ -1.44
TMPO-212	ENST00000556029	RYR2	Q92736	4967 aa		6.08	□□□□□ -1.44
TMPO-212	ENST00000556029	LRP1	Q07954	4544 aa	Known RBP	6.07	□□□□□ -1.44
TMPO-212	ENST00000556029	PP632	Q6XCG6	107 aa		6.07	□□□□□ -1.44
TMPO-212	ENST00000556029	KRTAP10-10	P60014	251 aa		6.07	□□□□□ -1.44
TMPO-212	ENST00000556029	KIAA1109	Q2LD37	5005 aa		6.06	□□□□□ -1.44
TMPO-212	ENST00000556029	KRTAP12-2	P59991	146 aa		6.06	□□□□□ -1.44
TMPO-212	ENST00000556029	FAT3	Q8TDW7	4589 aa		6.05	□□□□□ -1.44
TMPO-212	ENST00000556029	RYR3	Q15413	4870 aa		6.03	□□□□□ -1.44
TMPO-212	ENST00000556029	RYR1	P21817	5038 aa		6.01	□□□□□ -1.45
TMPO-212	ENST00000556029	MYCBP2	O75592	4640 aa		6.01	□□□□□ -1.45
TMPO-212	ENST00000556029	TNXB	P22105	4242 aa		5.96	□□□□□ -1.46
TMPO-212	ENST00000556029	HSPG2	P98160	4391 aa		5.94	□□□□□ -1.46
TMPO-212	ENST00000556029	BIRC6	Q9NR09	4857 aa		5.93	□□□□□ -1.46
TMPO-212	ENST00000556029	KRTAP17-1	Q9BYP8	105 aa		5.91	□□□□□ -1.46
TMPO-212	ENST00000556029	KRTAP12-1	P59990	96 aa		5.91	□□□□□ -1.46
TMPO-212	ENST00000556029	EPPK1	P58107	5090 aa	Known RBP	5.86	□□□□□ -1.47
TMPO-212	ENST00000556029	HERC2	O95714	4834 aa		5.77	□□□□□ -1.49
TMPO-212	ENST00000556029	LRP2	P98164	4655 aa		5.75	□□□□□ -1.49
TMPO-212	ENST00000556029	PRO2289	Q9P1D8	64 aa		5.71	□□□□□ -1.49
TMPO-212	ENST00000556029	LPA	P08519	4548 aa		5.7	□□□□□ -1.5
TMPO-212	ENST00000556029	KRTAP15-1	Q3LI76	137 aa		5.64	□□□□□ -1.51
TMPO-212	ENST00000556029	LOR	P23490	312 aa	Predicted RBP	5.62	□□□□□ -1.51
TMPO-212	ENST00000556029	KRTAP4-1	Q9BYQ7	146 aa		5.58	□□□□□ -1.52
TMPO-212	ENST00000556029	ABCA13	Q86UQ4	5058 aa		5.56	□□□□□ -1.52
TMPO-212	ENST00000556029	PCLO	Q9Y6V0	5065 aa		5.47	□□□□□ -1.53
TMPO-212	ENST00000556029	CRCT1	Q9UGL9	99 aa		5.43	□□□□□ -1.54
TMPO-212	ENST00000556029	MUC17	Q685J3	4493 aa		5.39	□□□□□ -1.55
TMPO-212	ENST00000556029	HERC1	Q15751	4861 aa		5.36	□□□□□ -1.55
TMPO-212	ENST00000556029	KRTAP19-2	Q3LHN2	52 aa		5.35	□□□□□ -1.55
TMPO-212	ENST00000556029	KRTAP10-12	P60413	245 aa		5.24	□□□□□ -1.57
TMPO-212	ENST00000556029	MUC2	Q02817	5179 aa		5.23	□□□□□ -1.57
TMPO-212	ENST00000556029	FLG	P20930	4061 aa	Predicted RBP	5.2	□□□□□ -1.58
TMPO-212	ENST00000556029	KRTAP12-3	P60328	96 aa		5.19	□□□□□ -1.58
TMPO-212	ENST00000556029	MT1H	P80294	61 aa		5.18	□□□□□ -1.58
TMPO-212	ENST00000556029	LCE3A	Q5TA76	89 aa		5.18	□□□□□ -1.58
TMPO-212	ENST00000556029	KRTAP23-1	A1A580	65 aa		5.13	□□□□□ -1.59
TMPO-212	ENST00000556029	INE1	O15225	51 aa		5.11	□□□□□ -1.59
TMPO-212	ENST00000556029	HMCN2	Q8NDA2	5059 aa		5.11	□□□□□ -1.59
TMPO-212	ENST00000556029	UBR4	Q5T4S7	5183 aa		5.11	□□□□□ -1.59
TMPO-212	ENST00000556029	MT2A	P02795	61 aa		5.09	□□□□□ -1.59
TMPO-212	ENST00000556029	SPRR2G	Q9BYE4	73 aa		5.08	□□□□□ -1.6
TMPO-212	ENST00000556029	RNF213	Q63HN8	5207 aa		5.08	□□□□□ -1.6
TMPO-212	ENST00000556029	LCE2C	Q5TA81	110 aa		5.07	□□□□□ -1.6
TMPO-212	ENST00000556029	SYNE1	Q8NF91	8797 aa	Known RBP	5.07	□□□□□ -1.6
TMPO-212	ENST00000556029	MT1F	P04733	61 aa		5.07	□□□□□ -1.6
TMPO-212	ENST00000556029	KRTAP19-1	Q8IUB9	90 aa		5.04	□□□□□ -1.6
TMPO-212	ENST00000556029	KRTAP10-5	P60370	271 aa		4.99	□□□□□ -1.61
TMPO-212	ENST00000556029	FAT4	Q6V0I7	4981 aa		4.99	□□□□□ -1.61
TMPO-212	ENST00000556029	OBSCN	Q5VST9	7968 aa		4.94	□□□□□ -1.62
TMPO-212	ENST00000556029	SPRR5	A0A1B0GTR4	108 aa		4.91	□□□□□ -1.62
TMPO-212	ENST00000556029	FSIP2	Q5CZC0	6907 aa		4.89	□□□□□ -1.63
TMPO-212	ENST00000556029	KRTAP9-8	Q9BYQ0	159 aa		4.86	□□□□□ -1.63
TMPO-212	ENST00000556029	KRTAP19-8	Q3LI54	63 aa		4.82	□□□□□ -1.64
TMPO-212	ENST00000556029	KRTAP8-1	Q8IUC2	63 aa		4.79	□□□□□ -1.64
TMPO-212	ENST00000556029	MT1B	P07438	61 aa		4.78	□□□□□ -1.64
TMPO-212	ENST00000556029	LCE2A	Q5TA79	106 aa	Predicted RBP	4.77	□□□□□ -1.65
TMPO-212	ENST00000556029	MT1X	P80297	61 aa		4.77	□□□□□ -1.65
TMPO-212	ENST00000556029	KRTAP10-7	P60409	375 aa	Predicted RBP	4.68	□□□□□ -1.66
TMPO-212	ENST00000556029	KRTAP9-2	Q9BYQ4	174 aa		4.68	□□□□□ -1.66
TMPO-212	ENST00000556029	KRTAP9-3	Q9BYQ3	159 aa		4.66	□□□□□ -1.66
TMPO-212	ENST00000556029	KRTAP19-5	Q3LI72	72 aa		4.61	□□□□□ -1.67
TMPO-212	ENST00000556029	LCE2B	O14633	110 aa		4.55	□□□□□ -1.68
TMPO-212	ENST00000556029	KRTAP4-8	A0A0G2JLE6	195 aa		4.54	□□□□□ -1.68
TMPO-212	ENST00000556029	KRTAP4-8	Q9BYQ9	185 aa		4.54	□□□□□ -1.68
TMPO-212	ENST00000556029	LCE2D	Q5TA82	110 aa	Predicted RBP	4.51	□□□□□ -1.69
TMPO-212	ENST00000556029	SPRR2F	Q96RM1	72 aa		4.49	□□□□□ -1.69
TMPO-212	ENST00000556029	LCE3C	Q5T5A8	94 aa		4.48	□□□□□ -1.69
TMPO-212	ENST00000556029	KRTAP9-6	A0A140TA67	174 aa		4.47	□□□□□ -1.69
TMPO-212	ENST00000556029	USH2A	O75445	5202 aa		4.44	□□□□□ -1.7
TMPO-212	ENST00000556029	LCE3B	Q5TA77	95 aa		4.33	□□□□□ -1.72
TMPO-212	ENST00000556029	KMT2D	O14686	5537 aa		4.31	□□□□□ -1.72
TMPO-212	ENST00000556029	KRTAP12-4	P60329	112 aa		4.31	□□□□□ -1.72
TMPO-212	ENST00000556029	MT1G	P13640	62 aa		4.27	□□□□□ -1.73
TMPO-212	ENST00000556029	KRTAP4-7	Q9BYR0	210 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms