RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-222ENST00000555914 LINC01558Q9Y6Z2 57 aa5.3□□□□□ -1.56
HNRNPC-222ENST00000555914 MMP24-AS1A0A0U1RRL7 71 aa5.28□□□□□ -1.56
HNRNPC-222ENST00000555914 DEFB116Q30KQ4 102 aa5.28□□□□□ -1.56
HNRNPC-222ENST00000555914 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
HNRNPC-222ENST00000555914 ZNF861PO60384 105 aa5.26□□□□□ -1.57
HNRNPC-222ENST00000555914 LINC00483Q53H64 154 aa5.26□□□□□ -1.57
HNRNPC-222ENST00000555914 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
HNRNPC-222ENST00000555914 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
HNRNPC-222ENST00000555914 C8orf17Q9NRJ1 99 aa5.24□□□□□ -1.57
HNRNPC-222ENST00000555914 A0A1B0GVX0 72 aa5.22□□□□□ -1.57
HNRNPC-222ENST00000555914 Q96NJ1 140 aa5.22□□□□□ -1.57
HNRNPC-222ENST00000555914 MRPL34Q9BQ48 92 aaKnown RBP5.22□□□□□ -1.57
HNRNPC-222ENST00000555914 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
HNRNPC-222ENST00000555914 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
HNRNPC-222ENST00000555914 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
HNRNPC-222ENST00000555914 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
HNRNPC-222ENST00000555914 ACYP2P14621 99 aa5.19□□□□□ -1.58
HNRNPC-222ENST00000555914 PCOTHQ58A44 107 aa5.19□□□□□ -1.58
HNRNPC-222ENST00000555914 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
HNRNPC-222ENST00000555914 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
HNRNPC-222ENST00000555914 IGLV9-49A0A0B4J1Y8 123 aa5.18□□□□□ -1.58
HNRNPC-222ENST00000555914 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
HNRNPC-222ENST00000555914 SPAG11AQ6PDA7 123 aa5.17□□□□□ -1.58
HNRNPC-222ENST00000555914 RETNLBQ9BQ08 111 aa5.17□□□□□ -1.58
HNRNPC-222ENST00000555914 HRES1P13985 223 aa5.15□□□□□ -1.58
HNRNPC-222ENST00000555914 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.58
HNRNPC-222ENST00000555914 LINC00304Q8N9R0 145 aa5.12□□□□□ -1.59
HNRNPC-222ENST00000555914 SPINK7P58062 85 aa5.11□□□□□ -1.59
HNRNPC-222ENST00000555914 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
HNRNPC-222ENST00000555914 SSBP3-AS1Q7Z2R9 100 aa5.08□□□□□ -1.6
HNRNPC-222ENST00000555914 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
HNRNPC-222ENST00000555914 A0A1B0GU69 56 aa5.08□□□□□ -1.6
HNRNPC-222ENST00000555914 TPRXLQ17RH7 258 aa5.07□□□□□ -1.6
HNRNPC-222ENST00000555914 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
HNRNPC-222ENST00000555914 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
HNRNPC-222ENST00000555914 UQCR11O14957 56 aa5.04□□□□□ -1.6
HNRNPC-222ENST00000555914 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
HNRNPC-222ENST00000555914 ROMO1P60602 79 aa5.02□□□□□ -1.61
HNRNPC-222ENST00000555914 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
HNRNPC-222ENST00000555914 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
HNRNPC-222ENST00000555914 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
HNRNPC-222ENST00000555914 Q5W150 140 aa4.99□□□□□ -1.61
HNRNPC-222ENST00000555914 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
HNRNPC-222ENST00000555914 SPINK1P00995 79 aa4.96□□□□□ -1.62
HNRNPC-222ENST00000555914 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
HNRNPC-222ENST00000555914 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
HNRNPC-222ENST00000555914 IGKV2D-30A0A075B6S6 120 aa4.91□□□□□ -1.62
HNRNPC-222ENST00000555914 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.62
HNRNPC-222ENST00000555914 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
HNRNPC-222ENST00000555914 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-222ENST00000555914 P0C880 135 aa4.85□□□□□ -1.63
HNRNPC-222ENST00000555914 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
HNRNPC-222ENST00000555914 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
HNRNPC-222ENST00000555914 K7ERS5 55 aa4.82□□□□□ -1.64
HNRNPC-222ENST00000555914 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
HNRNPC-222ENST00000555914 MT1HP80294 61 aa4.8□□□□□ -1.64
HNRNPC-222ENST00000555914 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
HNRNPC-222ENST00000555914 A8MUU9 505 aa4.73□□□□□ -1.65
HNRNPC-222ENST00000555914 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
HNRNPC-222ENST00000555914 A0A1B0GU33 70 aa4.73□□□□□ -1.65
HNRNPC-222ENST00000555914 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
HNRNPC-222ENST00000555914 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
HNRNPC-222ENST00000555914 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
HNRNPC-222ENST00000555914 M0R2T5 61 aa4.67□□□□□ -1.66
HNRNPC-222ENST00000555914 USH2AO75445 5202 aa4.66□□□□□ -1.66
HNRNPC-222ENST00000555914 NDUFAF8A1L188 74 aa4.65□□□□□ -1.66
HNRNPC-222ENST00000555914 H0YAA0 97 aa4.65□□□□□ -1.66
HNRNPC-222ENST00000555914 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
HNRNPC-222ENST00000555914 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
HNRNPC-222ENST00000555914 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
HNRNPC-222ENST00000555914 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
HNRNPC-222ENST00000555914 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
HNRNPC-222ENST00000555914 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
HNRNPC-222ENST00000555914 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
HNRNPC-222ENST00000555914 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
HNRNPC-222ENST00000555914 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
HNRNPC-222ENST00000555914 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
HNRNPC-222ENST00000555914 MT2AP02795 61 aa4.44□□□□□ -1.7
HNRNPC-222ENST00000555914 S4R3F8 94 aa4.43□□□□□ -1.7
HNRNPC-222ENST00000555914 MT1FP04733 61 aa4.41□□□□□ -1.7
HNRNPC-222ENST00000555914 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
HNRNPC-222ENST00000555914 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
HNRNPC-222ENST00000555914 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-222ENST00000555914 M0QZ58 72 aa4.35□□□□□ -1.71
HNRNPC-222ENST00000555914 KRTAP10-10P60014 251 aa4.35□□□□□ -1.71
HNRNPC-222ENST00000555914 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
HNRNPC-222ENST00000555914 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
HNRNPC-222ENST00000555914 A0A0D9SG42 100 aa4.34□□□□□ -1.71
HNRNPC-222ENST00000555914 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
HNRNPC-222ENST00000555914 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
HNRNPC-222ENST00000555914 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
HNRNPC-222ENST00000555914 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
HNRNPC-222ENST00000555914 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
HNRNPC-222ENST00000555914 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
HNRNPC-222ENST00000555914 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
HNRNPC-222ENST00000555914 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
HNRNPC-222ENST00000555914 R4GN34 69 aa4.13□□□□□ -1.75
HNRNPC-222ENST00000555914 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
HNRNPC-222ENST00000555914 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
HNRNPC-222ENST00000555914 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms