RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 H0YAA0 97 aa8.56□□□□□ -1.04
TUBB3-209ENST00000555609 H3BS24 57 aa8.54□□□□□ -1.04
TUBB3-209ENST00000555609 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
TUBB3-209ENST00000555609 KRTAP4-5Q9BYR2 181 aa8.51□□□□□ -1.05
TUBB3-209ENST00000555609 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
TUBB3-209ENST00000555609 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
TUBB3-209ENST00000555609 Q5VSD8 79 aa8.45□□□□□ -1.06
TUBB3-209ENST00000555609 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
TUBB3-209ENST00000555609 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
TUBB3-209ENST00000555609 K7ERS5 55 aa8.42□□□□□ -1.06
TUBB3-209ENST00000555609 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
TUBB3-209ENST00000555609 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
TUBB3-209ENST00000555609 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
TUBB3-209ENST00000555609 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
TUBB3-209ENST00000555609 LRP1Q07954 4544 aaKnown RBP8.32□□□□□ -1.08
TUBB3-209ENST00000555609 XP32Q5T750 250 aa8.31□□□□□ -1.08
TUBB3-209ENST00000555609 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
TUBB3-209ENST00000555609 TNXBP22105 4242 aa8.29□□□□□ -1.08
TUBB3-209ENST00000555609 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
TUBB3-209ENST00000555609 S4R3F8 94 aa8.28□□□□□ -1.08
TUBB3-209ENST00000555609 ROMO1P60602 79 aa8.26□□□□□ -1.09
TUBB3-209ENST00000555609 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.09
TUBB3-209ENST00000555609 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
TUBB3-209ENST00000555609 HERC1Q15751 4861 aa8.14□□□□□ -1.11
TUBB3-209ENST00000555609 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
TUBB3-209ENST00000555609 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
TUBB3-209ENST00000555609 J3QL48 77 aa8.07□□□□□ -1.12
TUBB3-209ENST00000555609 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
TUBB3-209ENST00000555609 A0A0D9SG42 100 aa8.04□□□□□ -1.12
TUBB3-209ENST00000555609 P0C880 135 aa8.04□□□□□ -1.12
TUBB3-209ENST00000555609 M0QZ58 72 aa7.98□□□□□ -1.13
TUBB3-209ENST00000555609 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
TUBB3-209ENST00000555609 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
TUBB3-209ENST00000555609 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
TUBB3-209ENST00000555609 HMCN2Q8NDA2 5059 aa7.86□□□□□ -1.15
TUBB3-209ENST00000555609 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
TUBB3-209ENST00000555609 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
TUBB3-209ENST00000555609 LPAP08519 4548 aa7.75□□□□□ -1.17
TUBB3-209ENST00000555609 LRP2P98164 4655 aa7.74□□□□□ -1.17
TUBB3-209ENST00000555609 C10orf95Q9H7T3 257 aa7.7□□□□□ -1.18
TUBB3-209ENST00000555609 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
TUBB3-209ENST00000555609 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
TUBB3-209ENST00000555609 R4GN34 69 aa7.66□□□□□ -1.18
TUBB3-209ENST00000555609 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
TUBB3-209ENST00000555609 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
TUBB3-209ENST00000555609 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
TUBB3-209ENST00000555609 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
TUBB3-209ENST00000555609 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
TUBB3-209ENST00000555609 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
TUBB3-209ENST00000555609 MUC2Q02817 5179 aa7.41□□□□□ -1.22
TUBB3-209ENST00000555609 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
TUBB3-209ENST00000555609 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
TUBB3-209ENST00000555609 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
TUBB3-209ENST00000555609 A0A0A0MQY5 61 aa7.18□□□□□ -1.26
TUBB3-209ENST00000555609 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
TUBB3-209ENST00000555609 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
TUBB3-209ENST00000555609 LUZP6Q538Z0 58 aa7.15□□□□□ -1.26
TUBB3-209ENST00000555609 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
TUBB3-209ENST00000555609 TNP1P09430 55 aa7.07□□□□□ -1.28
TUBB3-209ENST00000555609 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
TUBB3-209ENST00000555609 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
TUBB3-209ENST00000555609 LCE2AQ5TA79 106 aaPredicted RBP6.87□□□□□ -1.31
TUBB3-209ENST00000555609 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
TUBB3-209ENST00000555609 MT1HP80294 61 aa6.81□□□□□ -1.32
TUBB3-209ENST00000555609 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
TUBB3-209ENST00000555609 M0R2T5 61 aa6.78□□□□□ -1.32
TUBB3-209ENST00000555609 MT2AP02795 61 aa6.68□□□□□ -1.34
TUBB3-209ENST00000555609 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
TUBB3-209ENST00000555609 KRTAP19-8Q3LI54 63 aa6.67□□□□□ -1.34
TUBB3-209ENST00000555609 MT1FP04733 61 aa6.65□□□□□ -1.34
TUBB3-209ENST00000555609 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
TUBB3-209ENST00000555609 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
TUBB3-209ENST00000555609 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
TUBB3-209ENST00000555609 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
TUBB3-209ENST00000555609 MT1BP07438 61 aa6.48□□□□□ -1.37
TUBB3-209ENST00000555609 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
TUBB3-209ENST00000555609 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
TUBB3-209ENST00000555609 MT1XP80297 61 aa6.45□□□□□ -1.38
TUBB3-209ENST00000555609 INE1O15225 51 aa6.41□□□□□ -1.38
TUBB3-209ENST00000555609 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
TUBB3-209ENST00000555609 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
TUBB3-209ENST00000555609 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
TUBB3-209ENST00000555609 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
TUBB3-209ENST00000555609 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
TUBB3-209ENST00000555609 USH2AO75445 5202 aa6.26□□□□□ -1.41
TUBB3-209ENST00000555609 LCE2BO14633 110 aa6.21□□□□□ -1.42
TUBB3-209ENST00000555609 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
TUBB3-209ENST00000555609 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
TUBB3-209ENST00000555609 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
TUBB3-209ENST00000555609 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
TUBB3-209ENST00000555609 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
TUBB3-209ENST00000555609 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
TUBB3-209ENST00000555609 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
TUBB3-209ENST00000555609 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
TUBB3-209ENST00000555609 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
TUBB3-209ENST00000555609 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
TUBB3-209ENST00000555609 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
TUBB3-209ENST00000555609 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
TUBB3-209ENST00000555609 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
TUBB3-209ENST00000555609 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms