RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RPL37P61927 97 aaKnown RBP12.74□□□□□ -0.37
TMEM260-207ENST00000555497 UQCR11O14957 56 aa12.67□□□□□ -0.38
TMEM260-207ENST00000555497 MIR22HGQ0VDD5 57 aa12.66□□□□□ -0.38
TMEM260-207ENST00000555497 COX6B2Q6YFQ2 88 aa12.66□□□□□ -0.38
TMEM260-207ENST00000555497 KRTAP4-5Q9BYR2 181 aa12.65□□□□□ -0.38
TMEM260-207ENST00000555497 PRAC1Q96KF2 57 aa12.61□□□□□ -0.39
TMEM260-207ENST00000555497 ADM2Q7Z4H4 148 aa12.57□□□□□ -0.4
TMEM260-207ENST00000555497 TPRXLQ17RH7 258 aa12.42□□□□□ -0.42
TMEM260-207ENST00000555497 LRP2P98164 4655 aa12.4□□□□□ -0.42
TMEM260-207ENST00000555497 ABCA13Q86UQ4 5058 aa12.38□□□□□ -0.43
TMEM260-207ENST00000555497 LINC01554Q52M75 96 aa12.36□□□□□ -0.43
TMEM260-207ENST00000555497 LPAP08519 4548 aa12.35□□□□□ -0.43
TMEM260-207ENST00000555497 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
TMEM260-207ENST00000555497 H0YAA0 97 aa12.23□□□□□ -0.45
TMEM260-207ENST00000555497 CSAG1Q6PB30 78 aa12.23□□□□□ -0.45
TMEM260-207ENST00000555497 A0A1B0GU33 70 aa12.23□□□□□ -0.45
TMEM260-207ENST00000555497 S4R3F8 94 aa12.22□□□□□ -0.45
TMEM260-207ENST00000555497 H1FX-AS1Q4G0G2 97 aa12.21□□□□□ -0.45
TMEM260-207ENST00000555497 HERC2O95714 4834 aa12.13□□□□□ -0.47
TMEM260-207ENST00000555497 J3QL48 77 aa12.1□□□□□ -0.47
TMEM260-207ENST00000555497 KRTAP10-6P60371 365 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-207ENST00000555497 KRTAP3-2Q9BYR7 98 aa12.07□□□□□ -0.48
TMEM260-207ENST00000555497 BIRC6Q9NR09 4857 aa12.02□□□□□ -0.49
TMEM260-207ENST00000555497 SEC61BP60468 96 aaKnown RBP11.94□□□□□ -0.5
TMEM260-207ENST00000555497 P0C880 135 aa11.92□□□□□ -0.5
TMEM260-207ENST00000555497 KRTAP13-4Q3LI77 160 aa11.92□□□□□ -0.5
TMEM260-207ENST00000555497 KRTAP4-1Q9BYQ7 146 aa11.92□□□□□ -0.5
TMEM260-207ENST00000555497 KRTAP25-1Q3LHN0 102 aa11.9□□□□□ -0.51
TMEM260-207ENST00000555497 MUC17Q685J3 4493 aa11.9□□□□□ -0.51
TMEM260-207ENST00000555497 K7ERS5 55 aa11.76□□□□□ -0.53
TMEM260-207ENST00000555497 A0A0D9SG42 100 aa11.72□□□□□ -0.53
TMEM260-207ENST00000555497 KRTAP19-2Q3LHN2 52 aa11.66□□□□□ -0.54
TMEM260-207ENST00000555497 ROMO1P60602 79 aa11.6□□□□□ -0.55
TMEM260-207ENST00000555497 H3BS24 57 aa11.59□□□□□ -0.55
TMEM260-207ENST00000555497 PCLOQ9Y6V0 5065 aa11.59□□□□□ -0.55
TMEM260-207ENST00000555497 CRIPTQ9P021 101 aa11.56□□□□□ -0.56
TMEM260-207ENST00000555497 HERC1Q15751 4861 aa11.55□□□□□ -0.56
TMEM260-207ENST00000555497 MUC2Q02817 5179 aa11.47□□□□□ -0.57
TMEM260-207ENST00000555497 M0QZ58 72 aa11.47□□□□□ -0.57
TMEM260-207ENST00000555497 KRTAP12-2P59991 146 aa11.47□□□□□ -0.57
TMEM260-207ENST00000555497 HMCN2Q8NDA2 5059 aa11.43□□□□□ -0.58
TMEM260-207ENST00000555497 KRTAP12-1P59990 96 aa11.42□□□□□ -0.58
TMEM260-207ENST00000555497 LORP23490 312 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-207ENST00000555497 SPINT4Q6UDR6 99 aa11.35□□□□□ -0.59
TMEM260-207ENST00000555497 FLGP20930 4061 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-207ENST00000555497 R4GN34 69 aa11.29□□□□□ -0.6
TMEM260-207ENST00000555497 C10orf95Q9H7T3 257 aa11.13□□□□□ -0.63
TMEM260-207ENST00000555497 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
TMEM260-207ENST00000555497 FAT4Q6V0I7 4981 aa10.95□□□□□ -0.66
TMEM260-207ENST00000555497 KRTAP15-1Q3LI76 137 aa10.93□□□□□ -0.66
TMEM260-207ENST00000555497 RNF213Q63HN8 5207 aa10.9□□□□□ -0.66
TMEM260-207ENST00000555497 UBR4Q5T4S7 5183 aa10.9□□□□□ -0.67
TMEM260-207ENST00000555497 MT1HP80294 61 aa10.81□□□□□ -0.68
TMEM260-207ENST00000555497 M0R2T5 61 aa10.73□□□□□ -0.69
TMEM260-207ENST00000555497 NDUFAF8A1L188 74 aa10.72□□□□□ -0.69
TMEM260-207ENST00000555497 CAMK2N1Q7Z7J9 78 aa10.65□□□□□ -0.7
TMEM260-207ENST00000555497 KRTAP19-1Q8IUB9 90 aa10.58□□□□□ -0.72
TMEM260-207ENST00000555497 SPRR2GQ9BYE4 73 aa10.58□□□□□ -0.72
TMEM260-207ENST00000555497 MT2AP02795 61 aa10.54□□□□□ -0.72
TMEM260-207ENST00000555497 MT1FP04733 61 aa10.54□□□□□ -0.72
TMEM260-207ENST00000555497 KRTAP9-8Q9BYQ0 159 aa10.53□□□□□ -0.72
TMEM260-207ENST00000555497 KRTAP10-10P60014 251 aa10.46□□□□□ -0.73
TMEM260-207ENST00000555497 PLAC4Q8WY50 150 aa10.32□□□□□ -0.76
TMEM260-207ENST00000555497 TNP1P09430 55 aa10.21□□□□□ -0.78
TMEM260-207ENST00000555497 KRTAP19-8Q3LI54 63 aa10.19□□□□□ -0.78
TMEM260-207ENST00000555497 PP632Q6XCG6 107 aa10.18□□□□□ -0.78
TMEM260-207ENST00000555497 KRTAP9-3Q9BYQ3 159 aa10.11□□□□□ -0.79
TMEM260-207ENST00000555497 MT1BP07438 61 aa10.1□□□□□ -0.79
TMEM260-207ENST00000555497 KRTAP23-1A1A580 65 aa9.99□□□□□ -0.81
TMEM260-207ENST00000555497 KRTAP10-5P60370 271 aa9.92□□□□□ -0.82
TMEM260-207ENST00000555497 MT1XP80297 61 aa9.91□□□□□ -0.82
TMEM260-207ENST00000555497 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-207ENST00000555497 LUZP6Q538Z0 58 aa9.88□□□□□ -0.83
TMEM260-207ENST00000555497 LCE3AQ5TA76 89 aa9.8□□□□□ -0.84
TMEM260-207ENST00000555497 LCE2BO14633 110 aa9.78□□□□□ -0.84
TMEM260-207ENST00000555497 KRTAP10-7P60409 375 aaPredicted RBP9.6□□□□□ -0.87
TMEM260-207ENST00000555497 SPRR5A0A1B0GTR4 108 aa9.6□□□□□ -0.87
TMEM260-207ENST00000555497 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
TMEM260-207ENST00000555497 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
TMEM260-207ENST00000555497 KRTAP8-1Q8IUC2 63 aa9.54□□□□□ -0.88
TMEM260-207ENST00000555497 PRO2289Q9P1D8 64 aa9.52□□□□□ -0.88
TMEM260-207ENST00000555497 USH2AO75445 5202 aa9.46□□□□□ -0.89
TMEM260-207ENST00000555497 KRTAP12-3P60328 96 aa9.32□□□□□ -0.92
TMEM260-207ENST00000555497 KRTAP4-8A0A0G2JLE6 195 aa9.12□□□□□ -0.95
TMEM260-207ENST00000555497 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
TMEM260-207ENST00000555497 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
TMEM260-207ENST00000555497 KMT2DO14686 5537 aa9.1□□□□□ -0.95
TMEM260-207ENST00000555497 SSPOA2VEC9 5147 aa9.03□□□□□ -0.96
TMEM260-207ENST00000555497 KRTAP19-6Q3LI70 58 aa8.89□□□□□ -0.99
TMEM260-207ENST00000555497 KRTAP19-7Q3SYF9 63 aa8.85□□□□□ -0.99
TMEM260-207ENST00000555497 FSIP2Q5CZC0 6907 aa8.81□□□□□ -1
TMEM260-207ENST00000555497 LCE3CQ5T5A8 94 aa8.76□□□□□ -1.01
TMEM260-207ENST00000555497 INE1O15225 51 aa8.67□□□□□ -1.02
TMEM260-207ENST00000555497 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.03
TMEM260-207ENST00000555497 MT1EP04732 61 aa8.61□□□□□ -1.03
TMEM260-207ENST00000555497 MT1LQ93083 61 aa8.54□□□□□ -1.04
TMEM260-207ENST00000555497 KRTAP4-7Q9BYR0 210 aa8.54□□□□□ -1.04
TMEM260-207ENST00000555497 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
TMEM260-207ENST00000555497 KRTAP9-6A8MVA2 160 aa8.47□□□□□ -1.05
TMEM260-207ENST00000555497 KRTAP19-4Q3LI73 84 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms