RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
SYNE2-218ENST00000555241 A0A1B0GV90 55 aa9.66□□□□□ -0.86
SYNE2-218ENST00000555241 KRTAP19-8Q3LI54 63 aa9.66□□□□□ -0.86
SYNE2-218ENST00000555241 Q5VV11 94 aa9.66□□□□□ -0.86
SYNE2-218ENST00000555241 MT1BP07438 61 aa9.65□□□□□ -0.86
SYNE2-218ENST00000555241 A8MUN3 132 aa9.59□□□□□ -0.87
SYNE2-218ENST00000555241 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
SYNE2-218ENST00000555241 NDUFC1O43677 76 aa9.58□□□□□ -0.88
SYNE2-218ENST00000555241 OCR1Q9BZK8 76 aa9.58□□□□□ -0.88
SYNE2-218ENST00000555241 IMUPQ9GZP8 106 aa9.58□□□□□ -0.88
SYNE2-218ENST00000555241 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
SYNE2-218ENST00000555241 A6NN06 94 aa9.55□□□□□ -0.88
SYNE2-218ENST00000555241 MP68P56378 58 aa9.55□□□□□ -0.88
SYNE2-218ENST00000555241 H0YAA0 97 aa9.52□□□□□ -0.89
SYNE2-218ENST00000555241 J3QR89 54 aa9.52□□□□□ -0.89
SYNE2-218ENST00000555241 KRTAP6-3Q3LI67 103 aa9.51□□□□□ -0.89
SYNE2-218ENST00000555241 KRTAP10-5P60370 271 aa9.44□□□□□ -0.9
SYNE2-218ENST00000555241 H3BPC8 53 aa9.43□□□□□ -0.9
SYNE2-218ENST00000555241 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
SYNE2-218ENST00000555241 SCGB1A1P11684 91 aa9.36□□□□□ -0.91
SYNE2-218ENST00000555241 DMAC1Q96GE9 116 aa9.3□□□□□ -0.92
SYNE2-218ENST00000555241 C20orf197Q8N268 126 aa9.2□□□□□ -0.94
SYNE2-218ENST00000555241 R4GN34 69 aa9.17□□□□□ -0.94
SYNE2-218ENST00000555241 P0C880 135 aa9.16□□□□□ -0.94
SYNE2-218ENST00000555241 MT-ATP8P03928 68 aa9.15□□□□□ -0.94
SYNE2-218ENST00000555241 K7ERU9 68 aa9.13□□□□□ -0.95
SYNE2-218ENST00000555241 SMIM20Q8N5G0 67 aa9.13□□□□□ -0.95
SYNE2-218ENST00000555241 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
SYNE2-218ENST00000555241 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
SYNE2-218ENST00000555241 NEBP20929 6669 aa9.12□□□□□ -0.95
SYNE2-218ENST00000555241 PLAC4Q8WY50 150 aa9.11□□□□□ -0.95
SYNE2-218ENST00000555241 PRO2289Q9P1D8 64 aa9.11□□□□□ -0.95
SYNE2-218ENST00000555241 KRTAP5-9P26371 169 aa9.09□□□□□ -0.95
SYNE2-218ENST00000555241 M0QZ58 72 aa9.08□□□□□ -0.96
SYNE2-218ENST00000555241 ACYP2P14621 99 aa9.08□□□□□ -0.96
SYNE2-218ENST00000555241 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
SYNE2-218ENST00000555241 MT1XP80297 61 aa9.05□□□□□ -0.96
SYNE2-218ENST00000555241 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
SYNE2-218ENST00000555241 KMT2DO14686 5537 aa8.96□□□□□ -0.98
SYNE2-218ENST00000555241 LINC01554Q52M75 96 aa8.93□□□□□ -0.98
SYNE2-218ENST00000555241 SNURFQ9Y675 71 aa8.91□□□□□ -0.98
SYNE2-218ENST00000555241 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
SYNE2-218ENST00000555241 KRTAP12-2P59991 146 aa8.86□□□□□ -0.99
SYNE2-218ENST00000555241 MDN1Q9NU22 5596 aa8.86□□□□□ -0.99
SYNE2-218ENST00000555241 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
SYNE2-218ENST00000555241 KRTAP20-1Q3LI63 56 aa8.8□□□□□ -1
SYNE2-218ENST00000555241 SPRR2FQ96RM1 72 aa8.8□□□□□ -1
SYNE2-218ENST00000555241 SERP2Q8N6R1 65 aa8.79□□□□□ -1
SYNE2-218ENST00000555241 KRTAP8-1Q8IUC2 63 aa8.78□□□□□ -1
SYNE2-218ENST00000555241 SPRR2EP22531 72 aa8.67□□□□□ -1.02
SYNE2-218ENST00000555241 SPRR2BP35325 72 aa8.67□□□□□ -1.02
SYNE2-218ENST00000555241 SPRR2AP35326 72 aa8.67□□□□□ -1.02
SYNE2-218ENST00000555241 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
SYNE2-218ENST00000555241 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
SYNE2-218ENST00000555241 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-218ENST00000555241 KRTAP10-12P60413 245 aa8.61□□□□□ -1.03
SYNE2-218ENST00000555241 KRTAP2-3P0C7H8 128 aa8.57□□□□□ -1.04
SYNE2-218ENST00000555241 KRTAP2-4Q9BYR9 128 aa8.57□□□□□ -1.04
SYNE2-218ENST00000555241 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
SYNE2-218ENST00000555241 LCE1AQ5T7P2 110 aa8.56□□□□□ -1.04
SYNE2-218ENST00000555241 COA5Q86WW8 74 aa8.56□□□□□ -1.04
SYNE2-218ENST00000555241 COX7CP15954 63 aa8.51□□□□□ -1.05
SYNE2-218ENST00000555241 SEC61GP60059 68 aa8.43□□□□□ -1.06
SYNE2-218ENST00000555241 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
SYNE2-218ENST00000555241 SERP1Q9Y6X1 66 aa8.42□□□□□ -1.06
SYNE2-218ENST00000555241 H7BZZ5 65 aa8.39□□□□□ -1.07
SYNE2-218ENST00000555241 SPRR2DP22532 72 aa8.38□□□□□ -1.07
SYNE2-218ENST00000555241 CYSTM1Q9H1C7 97 aa8.36□□□□□ -1.07
SYNE2-218ENST00000555241 KRTAP2-2Q9BYT5 123 aa8.31□□□□□ -1.08
SYNE2-218ENST00000555241 KRTAP2-1Q9BYU5 128 aa8.31□□□□□ -1.08
SYNE2-218ENST00000555241 A0A0D9SG42 100 aa8.29□□□□□ -1.08
SYNE2-218ENST00000555241 A0A1B0GU33 70 aa8.28□□□□□ -1.08
SYNE2-218ENST00000555241 SPATA8Q6RVD6 105 aa8.28□□□□□ -1.08
SYNE2-218ENST00000555241 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
SYNE2-218ENST00000555241 ANAPC13Q9BS18 74 aa8.19□□□□□ -1.1
SYNE2-218ENST00000555241 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
SYNE2-218ENST00000555241 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
SYNE2-218ENST00000555241 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SYNE2-218ENST00000555241 KRTAP19-7Q3SYF9 63 aa8.09□□□□□ -1.11
SYNE2-218ENST00000555241 SMIM26A0A096LP01 95 aa8.06□□□□□ -1.12
SYNE2-218ENST00000555241 MT1EP04732 61 aa8.03□□□□□ -1.12
SYNE2-218ENST00000555241 CCDC179H3BU77 68 aa8.02□□□□□ -1.13
SYNE2-218ENST00000555241 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
SYNE2-218ENST00000555241 ATP5EP56381 51 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-218ENST00000555241 KRTAP19-3Q7Z4W3 81 aa7.97□□□□□ -1.13
SYNE2-218ENST00000555241 A8MU10 97 aa7.96□□□□□ -1.14
SYNE2-218ENST00000555241 PRR15LQ9BU68 103 aa7.9□□□□□ -1.14
SYNE2-218ENST00000555241 DSTQ03001 7570 aaKnown RBP7.88□□□□□ -1.15
SYNE2-218ENST00000555241 KRTAP19-5Q3LI72 72 aa7.88□□□□□ -1.15
SYNE2-218ENST00000555241 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
SYNE2-218ENST00000555241 MT1GP13640 62 aa7.79□□□□□ -1.16
SYNE2-218ENST00000555241 TNP1P09430 55 aa7.78□□□□□ -1.16
SYNE2-218ENST00000555241 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
SYNE2-218ENST00000555241 TMEM258P61165 79 aa7.75□□□□□ -1.17
SYNE2-218ENST00000555241 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
SYNE2-218ENST00000555241 LCE3AQ5TA76 89 aa7.71□□□□□ -1.18
SYNE2-218ENST00000555241 MT1LQ93083 61 aa7.67□□□□□ -1.18
SYNE2-218ENST00000555241 UQCR11O14957 56 aa7.64□□□□□ -1.19
SYNE2-218ENST00000555241 MT1MQ8N339 61 aa7.64□□□□□ -1.19
SYNE2-218ENST00000555241 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms