RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
PCNX1-207ENST00000554691 MEGF8Q7Z7M0 2845 aa3.07□□□□□ -1.92
PCNX1-207ENST00000554691 DNAH3Q8TD57 4116 aa3.06□□□□□ -1.92
PCNX1-207ENST00000554691 KRTAP3-3Q9BYR6 98 aa3.05□□□□□ -1.92
PCNX1-207ENST00000554691 A0A1B0GVY2 172 aa3.04□□□□□ -1.92
PCNX1-207ENST00000554691 DNHD1Q96M86 4753 aa3.02□□□□□ -1.93
PCNX1-207ENST00000554691 DNAH6Q9C0G6 4158 aa3.01□□□□□ -1.93
PCNX1-207ENST00000554691 VPS13DQ5THJ4 4388 aa3□□□□□ -1.93
PCNX1-207ENST00000554691 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
PCNX1-207ENST00000554691 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.93
PCNX1-207ENST00000554691 PRKDCP78527 4128 aaKnown RBP2.96□□□□□ -1.94
PCNX1-207ENST00000554691 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
PCNX1-207ENST00000554691 DNAH17Q9UFH2 4485 aa2.94□□□□□ -1.94
PCNX1-207ENST00000554691 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
PCNX1-207ENST00000554691 DYNC2H1Q8NCM8 4307 aaKnown RBP2.91□□□□□ -1.94
PCNX1-207ENST00000554691 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
PCNX1-207ENST00000554691 LCE2DQ5TA82 110 aaPredicted RBP2.89□□□□□ -1.95
PCNX1-207ENST00000554691 DNAH2Q9P225 4427 aa2.88□□□□□ -1.95
PCNX1-207ENST00000554691 PKHD1P08F94 4074 aa2.84□□□□□ -1.95
PCNX1-207ENST00000554691 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.96
PCNX1-207ENST00000554691 KRTAP17-1Q9BYP8 105 aa2.82□□□□□ -1.96
PCNX1-207ENST00000554691 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
PCNX1-207ENST00000554691 STARD9Q9P2P6 4700 aa2.79□□□□□ -1.96
PCNX1-207ENST00000554691 PKD1P98161 4303 aa2.78□□□□□ -1.96
PCNX1-207ENST00000554691 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
PCNX1-207ENST00000554691 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
PCNX1-207ENST00000554691 KMT2CQ8NEZ4 4911 aaKnown RBP2.74□□□□□ -1.97
PCNX1-207ENST00000554691 MT1HL1P0DM35 61 aa2.73□□□□□ -1.97
PCNX1-207ENST00000554691 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
PCNX1-207ENST00000554691 DNAH11Q96DT5 4516 aa2.72□□□□□ -1.97
PCNX1-207ENST00000554691 RYR3Q15413 4870 aa2.72□□□□□ -1.97
PCNX1-207ENST00000554691 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
PCNX1-207ENST00000554691 KRTAP10-12P60413 245 aa2.71□□□□□ -1.98
PCNX1-207ENST00000554691 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
PCNX1-207ENST00000554691 DNAH5Q8TE73 4624 aa2.7□□□□□ -1.98
PCNX1-207ENST00000554691 KRTAP4-5Q9BYR2 181 aa2.69□□□□□ -1.98
PCNX1-207ENST00000554691 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
PCNX1-207ENST00000554691 SACSQ9NZJ4 4579 aa2.67□□□□□ -1.98
PCNX1-207ENST00000554691 LORP23490 312 aaPredicted RBP2.65□□□□□ -1.98
PCNX1-207ENST00000554691 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
PCNX1-207ENST00000554691 KRTAP19-4Q3LI73 84 aa2.63□□□□□ -1.99
PCNX1-207ENST00000554691 PKHD1L1Q86WI1 4243 aa2.61□□□□□ -1.99
PCNX1-207ENST00000554691 TNXBP22105 4242 aa2.61□□□□□ -1.99
PCNX1-207ENST00000554691 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
PCNX1-207ENST00000554691 HSPG2P98160 4391 aa2.58□□□□□ -2
PCNX1-207ENST00000554691 LPAP08519 4548 aa2.57□□□□□ -2
PCNX1-207ENST00000554691 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
PCNX1-207ENST00000554691 APOBP04114 4563 aaKnown RBP2.56□□□□□ -2
PCNX1-207ENST00000554691 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
PCNX1-207ENST00000554691 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
PCNX1-207ENST00000554691 BIRC6Q9NR09 4857 aa2.55□□□□□ -2
PCNX1-207ENST00000554691 RYR2Q92736 4967 aa2.54□□□□□ -2
PCNX1-207ENST00000554691 LRP1Q07954 4544 aaKnown RBP2.52□□□□□ -2.01
PCNX1-207ENST00000554691 DYNC1H1Q14204 4646 aaKnown RBP2.51□□□□□ -2.01
PCNX1-207ENST00000554691 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
PCNX1-207ENST00000554691 LCE2BO14633 110 aa2.47□□□□□ -2.01
PCNX1-207ENST00000554691 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
PCNX1-207ENST00000554691 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
PCNX1-207ENST00000554691 RYR1P21817 5038 aa2.43□□□□□ -2.02
PCNX1-207ENST00000554691 FAT1Q14517 4588 aa2.42□□□□□ -2.02
PCNX1-207ENST00000554691 LCE2CQ5TA81 110 aa2.41□□□□□ -2.02
PCNX1-207ENST00000554691 KRTAP9-6A0A140TA67 174 aa2.4□□□□□ -2.02
PCNX1-207ENST00000554691 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
PCNX1-207ENST00000554691 KRTAP10-5P60370 271 aa2.38□□□□□ -2.03
PCNX1-207ENST00000554691 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
PCNX1-207ENST00000554691 KRTAP19-8Q3LI54 63 aa2.38□□□□□ -2.03
PCNX1-207ENST00000554691 MT1HP80294 61 aa2.37□□□□□ -2.03
PCNX1-207ENST00000554691 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
PCNX1-207ENST00000554691 MT2AP02795 61 aa2.34□□□□□ -2.04
PCNX1-207ENST00000554691 MUC2Q02817 5179 aa2.33□□□□□ -2.04
PCNX1-207ENST00000554691 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
PCNX1-207ENST00000554691 KRTAP19-1Q8IUB9 90 aa2.33□□□□□ -2.04
PCNX1-207ENST00000554691 KIAA1109Q2LD37 5005 aa2.33□□□□□ -2.04
PCNX1-207ENST00000554691 HERC2O95714 4834 aa2.32□□□□□ -2.04
PCNX1-207ENST00000554691 HERC1Q15751 4861 aa2.32□□□□□ -2.04
PCNX1-207ENST00000554691 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.04
PCNX1-207ENST00000554691 MUC17Q685J3 4493 aa2.27□□□□□ -2.05
PCNX1-207ENST00000554691 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
PCNX1-207ENST00000554691 MT1FP04733 61 aa2.27□□□□□ -2.05
PCNX1-207ENST00000554691 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
PCNX1-207ENST00000554691 MT1XP80297 61 aa2.25□□□□□ -2.05
PCNX1-207ENST00000554691 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
PCNX1-207ENST00000554691 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
PCNX1-207ENST00000554691 LRP2P98164 4655 aa2.23□□□□□ -2.05
PCNX1-207ENST00000554691 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
PCNX1-207ENST00000554691 MT1BP07438 61 aa2.2□□□□□ -2.06
PCNX1-207ENST00000554691 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
PCNX1-207ENST00000554691 SPRR2EP22531 72 aa2.18□□□□□ -2.06
PCNX1-207ENST00000554691 SPRR2BP35325 72 aa2.18□□□□□ -2.06
PCNX1-207ENST00000554691 SPRR2AP35326 72 aa2.18□□□□□ -2.06
PCNX1-207ENST00000554691 KRTAP2-3P0C7H8 128 aa2.15□□□□□ -2.06
PCNX1-207ENST00000554691 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.06
PCNX1-207ENST00000554691 KRTAP2-4Q9BYR9 128 aa2.15□□□□□ -2.06
PCNX1-207ENST00000554691 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.06
PCNX1-207ENST00000554691 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.06
PCNX1-207ENST00000554691 HMCN2Q8NDA2 5059 aa2.14□□□□□ -2.07
PCNX1-207ENST00000554691 MT1LQ93083 61 aa2.12□□□□□ -2.07
PCNX1-207ENST00000554691 SPRR2DP22532 72 aa2.12□□□□□ -2.07
PCNX1-207ENST00000554691 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
PCNX1-207ENST00000554691 KRTAP9-8Q9BYQ0 159 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms