RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.9
MEG3-224ENST00000554639 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
MEG3-224ENST00000554639 KRTAP3-1Q9BYR8 98 aa9.42□□□□□ -0.9
MEG3-224ENST00000554639 H3BS24 57 aa9.41□□□□□ -0.9
MEG3-224ENST00000554639 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
MEG3-224ENST00000554639 TPRXLQ17RH7 258 aa9.36□□□□□ -0.91
MEG3-224ENST00000554639 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
MEG3-224ENST00000554639 DMBT1Q9UGM3 2413 aaPredicted RBP9.35□□□□□ -0.91
MEG3-224ENST00000554639 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
MEG3-224ENST00000554639 EPPK1P58107 5090 aaKnown RBP9.2□□□□□ -0.94
MEG3-224ENST00000554639 KRTAP4-5Q9BYR2 181 aa9.18□□□□□ -0.94
MEG3-224ENST00000554639 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
MEG3-224ENST00000554639 ROMO1P60602 79 aa9.12□□□□□ -0.95
MEG3-224ENST00000554639 H0YAA0 97 aa9.11□□□□□ -0.95
MEG3-224ENST00000554639 S4R3F8 94 aa9.11□□□□□ -0.95
MEG3-224ENST00000554639 H1FX-AS1Q4G0G2 97 aa9.09□□□□□ -0.95
MEG3-224ENST00000554639 A0A1B0GU33 70 aa9.08□□□□□ -0.96
MEG3-224ENST00000554639 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
MEG3-224ENST00000554639 J3QL48 77 aa9.06□□□□□ -0.96
MEG3-224ENST00000554639 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
MEG3-224ENST00000554639 K7ERS5 55 aa9□□□□□ -0.97
MEG3-224ENST00000554639 KRTAP10-6P60371 365 aaPredicted RBP8.89□□□□□ -0.99
MEG3-224ENST00000554639 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
MEG3-224ENST00000554639 LRP2P98164 4655 aa8.86□□□□□ -0.99
MEG3-224ENST00000554639 HERC2O95714 4834 aa8.82□□□□□ -1
MEG3-224ENST00000554639 BIRC6Q9NR09 4857 aa8.8□□□□□ -1
MEG3-224ENST00000554639 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
MEG3-224ENST00000554639 LPAP08519 4548 aa8.76□□□□□ -1.01
MEG3-224ENST00000554639 P0C880 135 aa8.76□□□□□ -1.01
MEG3-224ENST00000554639 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
MEG3-224ENST00000554639 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
MEG3-224ENST00000554639 M0QZ58 72 aa8.66□□□□□ -1.02
MEG3-224ENST00000554639 MUC17Q685J3 4493 aa8.63□□□□□ -1.03
MEG3-224ENST00000554639 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
MEG3-224ENST00000554639 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
MEG3-224ENST00000554639 SPINT4Q6UDR6 99 aa8.57□□□□□ -1.04
MEG3-224ENST00000554639 A0A0D9SG42 100 aa8.53□□□□□ -1.04
MEG3-224ENST00000554639 KRTAP15-1Q3LI76 137 aa8.53□□□□□ -1.04
MEG3-224ENST00000554639 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
MEG3-224ENST00000554639 R4GN34 69 aa8.41□□□□□ -1.06
MEG3-224ENST00000554639 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
MEG3-224ENST00000554639 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
MEG3-224ENST00000554639 HMCN2Q8NDA2 5059 aa8.29□□□□□ -1.08
MEG3-224ENST00000554639 C10orf95Q9H7T3 257 aa8.29□□□□□ -1.08
MEG3-224ENST00000554639 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
MEG3-224ENST00000554639 HERC1Q15751 4861 aa8.28□□□□□ -1.08
MEG3-224ENST00000554639 FLGP20930 4061 aaPredicted RBP8.22□□□□□ -1.09
MEG3-224ENST00000554639 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
MEG3-224ENST00000554639 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
MEG3-224ENST00000554639 MUC2Q02817 5179 aa8.02□□□□□ -1.13
MEG3-224ENST00000554639 MT1HP80294 61 aa8□□□□□ -1.13
MEG3-224ENST00000554639 M0R2T5 61 aa7.95□□□□□ -1.14
MEG3-224ENST00000554639 CAMK2N1Q7Z7J9 78 aa7.93□□□□□ -1.14
MEG3-224ENST00000554639 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
MEG3-224ENST00000554639 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
MEG3-224ENST00000554639 A0A0A0MQY5 61 aa7.86□□□□□ -1.15
MEG3-224ENST00000554639 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
MEG3-224ENST00000554639 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
MEG3-224ENST00000554639 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
MEG3-224ENST00000554639 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
MEG3-224ENST00000554639 MT2AP02795 61 aa7.78□□□□□ -1.16
MEG3-224ENST00000554639 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
MEG3-224ENST00000554639 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
MEG3-224ENST00000554639 MT1FP04733 61 aa7.73□□□□□ -1.17
MEG3-224ENST00000554639 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
MEG3-224ENST00000554639 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
MEG3-224ENST00000554639 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
MEG3-224ENST00000554639 TNP1P09430 55 aa7.66□□□□□ -1.18
MEG3-224ENST00000554639 KRTAP19-8Q3LI54 63 aa7.64□□□□□ -1.19
MEG3-224ENST00000554639 KRTAP9-3Q9BYQ3 159 aa7.48□□□□□ -1.21
MEG3-224ENST00000554639 MT1BP07438 61 aa7.44□□□□□ -1.22
MEG3-224ENST00000554639 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
MEG3-224ENST00000554639 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
MEG3-224ENST00000554639 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
MEG3-224ENST00000554639 MT1XP80297 61 aa7.3□□□□□ -1.24
MEG3-224ENST00000554639 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
MEG3-224ENST00000554639 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
MEG3-224ENST00000554639 LCE2BO14633 110 aa7.15□□□□□ -1.26
MEG3-224ENST00000554639 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
MEG3-224ENST00000554639 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
MEG3-224ENST00000554639 INE1O15225 51 aa7.01□□□□□ -1.29
MEG3-224ENST00000554639 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
MEG3-224ENST00000554639 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
MEG3-224ENST00000554639 USH2AO75445 5202 aa6.71□□□□□ -1.34
MEG3-224ENST00000554639 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
MEG3-224ENST00000554639 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
MEG3-224ENST00000554639 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
MEG3-224ENST00000554639 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
MEG3-224ENST00000554639 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
MEG3-224ENST00000554639 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
MEG3-224ENST00000554639 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
MEG3-224ENST00000554639 KRTAP19-7Q3SYF9 63 aa6.5□□□□□ -1.37
MEG3-224ENST00000554639 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
MEG3-224ENST00000554639 MT1EP04732 61 aa6.38□□□□□ -1.39
MEG3-224ENST00000554639 MT1LQ93083 61 aa6.32□□□□□ -1.4
MEG3-224ENST00000554639 KMT2DO14686 5537 aa6.29□□□□□ -1.4
MEG3-224ENST00000554639 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
MEG3-224ENST00000554639 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
MEG3-224ENST00000554639 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
MEG3-224ENST00000554639 MT1GP13640 62 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms