RNA–Protein interactions for RNA: ENST00000554465.5

SRSF5-207, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 3,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-207ENST00000554465 RYR3Q15413 4870 aa4.69□□□□□ -1.66
SRSF5-207ENST00000554465 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
SRSF5-207ENST00000554465 SPINT4Q6UDR6 99 aa4.67□□□□□ -1.66
SRSF5-207ENST00000554465 KRTAP13-2Q52LG2 175 aa4.66□□□□□ -1.66
SRSF5-207ENST00000554465 MRPL34Q9BQ48 92 aaKnown RBP4.66□□□□□ -1.66
SRSF5-207ENST00000554465 Q5VSD8 79 aa4.61□□□□□ -1.67
SRSF5-207ENST00000554465 BIRC6Q9NR09 4857 aa4.6□□□□□ -1.67
SRSF5-207ENST00000554465 HERC2O95714 4834 aa4.58□□□□□ -1.68
SRSF5-207ENST00000554465 TYMSOSQ8TAI1 123 aa4.58□□□□□ -1.68
SRSF5-207ENST00000554465 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
SRSF5-207ENST00000554465 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
SRSF5-207ENST00000554465 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
SRSF5-207ENST00000554465 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
SRSF5-207ENST00000554465 A0A1B0GU33 70 aa4.53□□□□□ -1.68
SRSF5-207ENST00000554465 SMR3BP02814 79 aaPredicted RBP4.53□□□□□ -1.68
SRSF5-207ENST00000554465 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
SRSF5-207ENST00000554465 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
SRSF5-207ENST00000554465 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
SRSF5-207ENST00000554465 H0YAA0 97 aa4.46□□□□□ -1.69
SRSF5-207ENST00000554465 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
SRSF5-207ENST00000554465 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
SRSF5-207ENST00000554465 FLG2Q5D862 2391 aaPredicted RBP4.44□□□□□ -1.7
SRSF5-207ENST00000554465 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
SRSF5-207ENST00000554465 XP32Q5T750 250 aa4.43□□□□□ -1.7
SRSF5-207ENST00000554465 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
SRSF5-207ENST00000554465 MYCBP2O75592 4640 aa4.41□□□□□ -1.7
SRSF5-207ENST00000554465 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
SRSF5-207ENST00000554465 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
SRSF5-207ENST00000554465 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
SRSF5-207ENST00000554465 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
SRSF5-207ENST00000554465 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.71
SRSF5-207ENST00000554465 CRIPTQ9P021 101 aa4.32□□□□□ -1.72
SRSF5-207ENST00000554465 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
SRSF5-207ENST00000554465 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
SRSF5-207ENST00000554465 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
SRSF5-207ENST00000554465 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
SRSF5-207ENST00000554465 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
SRSF5-207ENST00000554465 LCE2BO14633 110 aa4.21□□□□□ -1.74
SRSF5-207ENST00000554465 PCLOQ9Y6V0 5065 aa4.2□□□□□ -1.74
SRSF5-207ENST00000554465 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
SRSF5-207ENST00000554465 HERC1Q15751 4861 aa4.18□□□□□ -1.74
SRSF5-207ENST00000554465 LPAP08519 4548 aa4.17□□□□□ -1.74
SRSF5-207ENST00000554465 R4GN34 69 aa4.16□□□□□ -1.74
SRSF5-207ENST00000554465 INE1O15225 51 aa4.15□□□□□ -1.74
SRSF5-207ENST00000554465 A0A0D9SG42 100 aa4.14□□□□□ -1.75
SRSF5-207ENST00000554465 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
SRSF5-207ENST00000554465 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
SRSF5-207ENST00000554465 LRP2P98164 4655 aa4.13□□□□□ -1.75
SRSF5-207ENST00000554465 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
SRSF5-207ENST00000554465 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
SRSF5-207ENST00000554465 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
SRSF5-207ENST00000554465 KRTAP10-6P60371 365 aaPredicted RBP4.03□□□□□ -1.77
SRSF5-207ENST00000554465 S4R3F8 94 aa4.01□□□□□ -1.77
SRSF5-207ENST00000554465 KRTAP12-2P59991 146 aa4□□□□□ -1.77
SRSF5-207ENST00000554465 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
SRSF5-207ENST00000554465 MUC2Q02817 5179 aa3.95□□□□□ -1.78
SRSF5-207ENST00000554465 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
SRSF5-207ENST00000554465 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
SRSF5-207ENST00000554465 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
SRSF5-207ENST00000554465 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
SRSF5-207ENST00000554465 KRTAP12-1P59990 96 aa3.84□□□□□ -1.8
SRSF5-207ENST00000554465 M0QZ58 72 aa3.82□□□□□ -1.8
SRSF5-207ENST00000554465 MT1HP80294 61 aa3.8□□□□□ -1.8
SRSF5-207ENST00000554465 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
SRSF5-207ENST00000554465 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
SRSF5-207ENST00000554465 SPRR2GQ9BYE4 73 aa3.72□□□□□ -1.81
SRSF5-207ENST00000554465 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
SRSF5-207ENST00000554465 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
SRSF5-207ENST00000554465 MT2AP02795 61 aa3.64□□□□□ -1.83
SRSF5-207ENST00000554465 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
SRSF5-207ENST00000554465 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
SRSF5-207ENST00000554465 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
SRSF5-207ENST00000554465 MT1FP04733 61 aa3.56□□□□□ -1.84
SRSF5-207ENST00000554465 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
SRSF5-207ENST00000554465 M0R2T5 61 aa3.48□□□□□ -1.85
SRSF5-207ENST00000554465 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
SRSF5-207ENST00000554465 MT1BP07438 61 aa3.45□□□□□ -1.86
SRSF5-207ENST00000554465 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
SRSF5-207ENST00000554465 TNP1P09430 55 aa3.39□□□□□ -1.87
SRSF5-207ENST00000554465 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
SRSF5-207ENST00000554465 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
SRSF5-207ENST00000554465 KRTAP9-2Q9BYQ4 174 aa3.34□□□□□ -1.88
SRSF5-207ENST00000554465 USH2AO75445 5202 aa3.33□□□□□ -1.88
SRSF5-207ENST00000554465 MT1XP80297 61 aa3.32□□□□□ -1.88
SRSF5-207ENST00000554465 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
SRSF5-207ENST00000554465 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
SRSF5-207ENST00000554465 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
SRSF5-207ENST00000554465 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
SRSF5-207ENST00000554465 KMT2DO14686 5537 aa3.25□□□□□ -1.89
SRSF5-207ENST00000554465 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
SRSF5-207ENST00000554465 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
SRSF5-207ENST00000554465 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
SRSF5-207ENST00000554465 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
SRSF5-207ENST00000554465 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
SRSF5-207ENST00000554465 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SRSF5-207ENST00000554465 KRTAP12-3P60328 96 aa3.09□□□□□ -1.92
SRSF5-207ENST00000554465 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.92
SRSF5-207ENST00000554465 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
SRSF5-207ENST00000554465 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
SRSF5-207ENST00000554465 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms