RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 SMR3BP02814 79 aaPredicted RBP0.86□□□□□ -2.27
IFT43-208ENST00000554423 MP68P56378 58 aa0.86□□□□□ -2.27
IFT43-208ENST00000554423 ATP5EP56381 51 aaPredicted RBP0.86□□□□□ -2.27
IFT43-208ENST00000554423 Q5XG85 94 aa0.86□□□□□ -2.27
IFT43-208ENST00000554423 Q96NJ1 140 aa0.86□□□□□ -2.27
IFT43-208ENST00000554423 LINC00472Q9H8W2 130 aa0.86□□□□□ -2.27
IFT43-208ENST00000554423 SERP1Q9Y6X1 66 aa0.86□□□□□ -2.27
IFT43-208ENST00000554423 APOBP04114 4563 aaKnown RBP0.85□□□□□ -2.27
IFT43-208ENST00000554423 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
IFT43-208ENST00000554423 TRAV22A0A0B4J277 110 aa0.85□□□□□ -2.27
IFT43-208ENST00000554423 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
IFT43-208ENST00000554423 KRTAP12-1P59990 96 aa0.85□□□□□ -2.27
IFT43-208ENST00000554423 RPS28P62857 69 aaKnown RBP0.85□□□□□ -2.27
IFT43-208ENST00000554423 COL7A1Q02388 2944 aa0.85□□□□□ -2.27
IFT43-208ENST00000554423 FP248Q71RG6 208 aaPredicted RBP0.85□□□□□ -2.27
IFT43-208ENST00000554423 MRPL34Q9BQ48 92 aaKnown RBP0.85□□□□□ -2.27
IFT43-208ENST00000554423 VPS13BQ7Z7G8 4022 aa0.85□□□□□ -2.27
IFT43-208ENST00000554423 LCE6AA0A183 80 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 PSPHP1O15172 72 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 LINC00313P59037 77 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 CD164Q04900 197 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 Q6ZSA8 131 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 SSBP3-AS1Q7Z2R9 100 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 BRK1Q8WUW1 75 aa0.84□□□□□ -2.27
IFT43-208ENST00000554423 PKHD1L1Q86WI1 4243 aa0.84□□□□□ -2.28
IFT43-208ENST00000554423 NBEAL1Q6ZS30 2694 aa0.84□□□□□ -2.28
IFT43-208ENST00000554423 FAT1Q14517 4588 aa0.84□□□□□ -2.28
IFT43-208ENST00000554423 MGAM2Q2M2H8 2515 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 MEGF8Q7Z7M0 2845 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 C8orf87E5RJ46 101 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 H3BPC8 53 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 ASB16-AS1Q495Z4 193 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 C1orf195Q5TG92 126 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 COA5Q86WW8 74 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 PRR15LQ9BU68 103 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 CYP4F30PQ9H0H9 118 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 TP53AIP1Q9HCN2 124 aa0.83□□□□□ -2.28
IFT43-208ENST00000554423 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 FBN3Q75N90 2809 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 LOC101927531A0A1B0GV80 90 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 A8MUN3 132 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 CHKB-CPT1BH3BT56 60 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 SPAG11AQ6PDA7 123 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 C7orf65Q6ZTY9 151 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 LIMD2Q9BT23 127 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 PKHD1P08F94 4074 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
IFT43-208ENST00000554423 RYR2Q92736 4967 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 STAB2Q8WWQ8 2551 aa0.82□□□□□ -2.28
IFT43-208ENST00000554423 TENM2Q9NT68 2774 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 SRRM2Q9UQ35 2752 aaKnown RBP0.81□□□□□ -2.28
IFT43-208ENST00000554423 HSPG2P98160 4391 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 TNXBP22105 4242 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 A6NED7 52 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 SPINK1P00995 79 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 Q1T7F1 81 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 Q5VV11 94 aa0.81□□□□□ -2.28
IFT43-208ENST00000554423 ACYP2P14621 99 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 SPINK7P58062 85 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 Q5VSD8 79 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 SPTSSBQ8NFR3 76 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 PRO0628Q9UI54 55 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 V9GYY9 64 aa0.8□□□□□ -2.28
IFT43-208ENST00000554423 LRP1Q07954 4544 aaKnown RBP0.79□□□□□ -2.28
IFT43-208ENST00000554423 KRTAP10-4P60372 401 aaPredicted RBP0.79□□□□□ -2.28
IFT43-208ENST00000554423 DMAC1Q96GE9 116 aa0.79□□□□□ -2.28
IFT43-208ENST00000554423 KMT2CQ8NEZ4 4911 aaKnown RBP0.79□□□□□ -2.28
IFT43-208ENST00000554423 RYR3Q15413 4870 aa0.79□□□□□ -2.28
IFT43-208ENST00000554423 RYR1P21817 5038 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 TGP01266 2768 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 A0A1B0GU69 56 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 PMAIP1Q13794 54 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 LCA10Q71F78 164 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 C20orf166-AS1Q96NR2 134 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 CDC42SE1Q9NRR8 79 aa0.78□□□□□ -2.28
IFT43-208ENST00000554423 MYCBP2O75592 4640 aa0.77□□□□□ -2.29
IFT43-208ENST00000554423 EPPK1P58107 5090 aaKnown RBP0.77□□□□□ -2.29
IFT43-208ENST00000554423 RPS29P62273 56 aaKnown RBP0.77□□□□□ -2.29
IFT43-208ENST00000554423 MIR22HGQ0VDD5 57 aa0.77□□□□□ -2.29
IFT43-208ENST00000554423 ATP11AUNQ6ZP68 121 aa0.77□□□□□ -2.29
IFT43-208ENST00000554423 LPAP08519 4548 aa0.77□□□□□ -2.29
IFT43-208ENST00000554423 MUC17Q685J3 4493 aa0.76□□□□□ -2.29
IFT43-208ENST00000554423 K7ERS5 55 aa0.76□□□□□ -2.29
IFT43-208ENST00000554423 UQCR11O14957 56 aa0.76□□□□□ -2.29
IFT43-208ENST00000554423 RPL37P61927 97 aaKnown RBP0.76□□□□□ -2.29
IFT43-208ENST00000554423 KRTAP25-1Q3LHN0 102 aa0.76□□□□□ -2.29
IFT43-208ENST00000554423 COX6B2Q6YFQ2 88 aa0.76□□□□□ -2.29
IFT43-208ENST00000554423 KIAA1109Q2LD37 5005 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 A0A0D9SG42 100 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 A0A1B0GU33 70 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 A6NN06 94 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 MT1HL1P0DM35 61 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 H1FX-AS1Q4G0G2 97 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 KTN1-AS1Q86SY8 53 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 S4R3F8 94 aa0.75□□□□□ -2.29
IFT43-208ENST00000554423 H0YAA0 97 aa0.74□□□□□ -2.29
IFT43-208ENST00000554423 RBM12B-AS1Q9P1G2 102 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms